Name: Aeromonas diversa DSM 25288
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 284

Type strain:

Species: Aeromonas diversa

Culture col. no.: DSM 25288, ATCC 43946, CCM 7325, CECT 4254, CIP 110816, LMG 17321, CDC 2478-85

Strain history: CIP <- 2014, CECT <- 1991, A. Martinez-Murica, Alicante Univ., Alicante, Spain <- ATCC <- FW. Hickman-Brenner <- Louisiana State Hlth Dept., Louisiana, USA <- Charity Hosp., New-Orleans, Louisiana, USA: strain CDC 2478-85

NCBI tax ID(s): 1268237 (strain), 502790 (species)

SI-ID 9072

LMG 17321, ATCC 43946, CECT 4254, CCM 7325, DSM 25288, CIP 110816

Section

Aeromonas diversa DSM 25288 is a mesophilic, motile bacterium that was isolated from human wound at tibia.

motile
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Aeromonadales*
	Family	*Aeromonadaceae*
	Genus	*Aeromonas*
	Species	**Aeromonas diversa**
	Full Scientific Name (LPSN)	Aeromonas diversa Miñana-Galbis et al. 2010

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %99.991

[Ref.: #118952]	Cell shape	rod-shaped

[Ref.: #118952]	Motility	yes
[Ref.: #69480]	Motility	yes Confidence in %97.346

Multimedia content

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Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

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Culture medium

TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

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Culture medium

TCS-Biorad-Tubes

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Culture medium growth

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Culture medium

CIP Medium 72

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Culture medium growth

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Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #17981]			growth	37 °C
[Ref.: #36545]			growth	37 °C

[Ref.: #17981]	Temperature range	mesophilic
[Ref.: #36545]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.876

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #17981]	Sample type/isolated from	human wound at tibia
[Ref.: #17981]	Geographic location (country and/or sea, region)	New Orleans, Louisiana, Charity Hospital
[Ref.: #17981]	Country	USA
[Ref.: #17981]	Country ISO 3 Code	USA
[Ref.: #17981]	Continent	North America

[Ref.: #118952]	Sample type/isolated from	Human, Leg wound
[Ref.: #118952]	Geographic location (country and/or sea, region)	Louisiana
[Ref.: #118952]	Country	United States of America
[Ref.: #118952]	Country ISO 3 Code	USA
[Ref.: #118952]	Continent	North America
* marker position based on {}

Isolation sources categories

#Host	#Human	-
#Host Body-Site	#Other	#Wound
#Host Body-Site	#Limb	#Leg

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #17981]	Biosafety level	2	Risk group (German classification) According to TRBA 466
[Ref.: #118952]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #17981]	Aeromonas diversa CDC 2478-85 strain CECT 4254 16S ribosomal RNA gene, partial sequence	GQ365710	1504	ENA	1268237 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Aeromonas diversa CDC 2478-85 CECT 4254	GCA_000819805	scaffold	GenBank	1268237 tax ID	*
[Ref.: #66792]	Aeromonas diversa CECT 4254	502790.3	wgs	PATRIC	502790 tax ID	*
[Ref.: #66792]	Aeromonas diversa 2478-85, CECT 4254	2534681677	draft	JGI IMG/M	1268237 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Aeromonas diversa CDC 2478-85 CECT 4254 NCBI: GCA_000819805.1
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Aeromonas diversa CDC 2478-85 CECT 4254 NCBI: GCA_000819805.1
[Ref.: #69480]	motile	yes	89.256	no
[Ref.: #69480]	flagellated	yes	90.762	no
[Ref.: #69480]	gram-positive	no	98.835	no
[Ref.: #69480]	anaerobic	no	96.203	no
[Ref.: #69480]	aerobic	yes	82.259	no
[Ref.: #69480]	halophile	no	86.637	no
[Ref.: #69480]	spore-forming	no	95.021	no
[Ref.: #69480]	glucose-util	yes	88.188	no
[Ref.: #69480]	thermophile	no	98.32	no
[Ref.: #69480]	glucose-ferment	yes	86.527	no

Availability in culture collections External links

[Ref.: #17981]

Culture collection no.

DSM 25288, ATCC 43946, CCM 7325, CECT 4254, CIP 110816, LMG 17321, CDC 2478-85

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SI-ID 9072

Literature:

Topic	Title	Authors	Journal	DOI	Year
Genetics	Draft Genome Sequence of the Aeromonas diversa Type Strain.	Farfan M, Spataro N, Sanglas A, Albarral V, Loren JG, Bosch E, Fuste MC	Genome Announc	10.1128/genomeA.00330-13	2013	*
Phylogeny	Proposal to assign Aeromonas diversa sp. nov. as a novel species designation for Aeromonas group 501.	Minana-Galbis D, Farfan M, Gaspar Loren J, Carmen Fuste M	Syst Appl Microbiol	10.1016/j.syapm.2009.11.002	2009	*

References

#17981

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 25288

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#36545 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#69966

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID9072.1 )

#118952 Collection of Institut Pasteur ; Curators of the CIP; CIP 110816
* These data were automatically processed and therefore are not curated

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Aeromonas diversa CDC 2478-85 CECT 4254

Aeromonas diversa CDC 2478-85 CECT 4254

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