Name: Aeromonas fluvialis 717
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 283

Type strain:

Species: Aeromonas fluvialis

Strain Designation: 717

Culture col. no.: DSM 23621, CECT 7401, LMG 24681, CIP 110205

Strain history: CIP <- 2010, CECT <- M. J. Figueras, Rovira i Virgili Univ., Reus, Spain: strain 717

NCBI tax ID(s): 591962 (species)

SI-ID 356286

LMG 24681, CECT 7401, CIP 110205, CCM 8437, DSM 23621

Special Collections

Section

When using BacDive for research please cite our paper

Aeromonas fluvialis 717 is a facultative anaerobe, mesophilic, Gram-negative bacterium that was isolated from river water.

Gram-negative
motile
rod-shaped
facultative anaerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Aeromonadales*
	Family	*Aeromonadaceae*
	Genus	*Aeromonas*
	Species	**Aeromonas fluvialis**
	Full Scientific Name (LPSN)	Aeromonas fluvialis Alperi et al. 2010

Information on morphological and physiological properties Morphology

[Ref.: #23261]	Gram stain	negative
[Ref.: #119412]	Gram stain	negative
[Ref.: #125438]	Gram stain	negative Confidence in %99.944
[Ref.: #125439]	Gram stain	negative Confidence in %99.6

[Ref.: #23261]	Cell length	3-3.5 µm

[Ref.: #23261]	Cell width	0.6-0.7 µm

[Ref.: #23261]	Cell shape	rod-shaped
[Ref.: #119412]	Cell shape	rod-shaped

[Ref.: #23261]	Motility	yes
[Ref.: #119412]	Motility	yes
[Ref.: #125438]	Motility	yes Confidence in %91.821

[Ref.: #23261]	Flagellum arrangement	monotrichous, polar

[Ref.: #23261]	Type of hemolysis	gamma
[Ref.: #23261]	Colony size	4-5 mm
[Ref.: #23261]	Colony color	beige, opaque
[Ref.: #23261]	Incubation period	2 days
[Ref.: #23261]	Cultivation medium used	TSA

Information on culture and growth conditions Culture and growth conditions

[Ref.: #17182]

Culture medium

REACTIVATION WITH LIQUID MEDIUM (DSMZ Medium 535b)

[Ref.: #17182]

Culture medium growth

[Ref.: #17182]

Culture medium link

Medium recipe at MediaDive

[Ref.: #17182]

Culture medium composition

expand / minimize

[Ref.: #23261]

Culture medium

MacConkey agar

[Ref.: #23261]

Culture medium growth

[Ref.: #23261]

Culture medium

Trypticase Soy Agar (TSA)

[Ref.: #23261]

Culture medium growth

[Ref.: #23261]

Culture medium

TSB

[Ref.: #23261]

Culture medium growth

[Ref.: #41028]

Culture medium

MEDIUM 72- for trypto casein soja agar

[Ref.: #41028]

Culture medium growth

[Ref.: #41028]

Culture medium composition

expand / minimize

[Ref.: #119412]

Culture medium

CIP Medium 72

[Ref.: #119412]

Culture medium growth

[Ref.: #119412]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #17182]		growth	28 °C
[Ref.: #23261]	negative	growth	4 °C
[Ref.: #23261]		growth	37 °C
[Ref.: #23261]		optimum	30 °C
[Ref.: #41028]		growth	30 °C

	pH	Kind of pH		pH
[Ref.: #23261]			growth	9
[Ref.: #23261]		no	growth	4.5

Information on physiology and metabolism Physiology and metabolism

[Ref.: #23261]	Oxygen tolerance	facultative anaerobe
[Ref.: #119412]	Oxygen tolerance	facultative anaerobe

[Ref.: #23261]	Ability of spore formation	no
[Ref.: #125438]	Ability of spore formation	no Confidence in %94.295
[Ref.: #125439]	Ability of spore formation	no Confidence in %99.4

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #23261]		NaCl	no	maximum	6	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #23261]	2-dehydro-D-gluconate ChEBI	-	builds acid from
[Ref.: #23261]	5-dehydro-D-gluconate ChEBI	-	builds acid from
[Ref.: #23261]	adipate ChEBI	-	carbon source
[Ref.: #23261]	amygdalin ChEBI	-	builds acid from
[Ref.: #23261]	arbutin ChEBI	-	builds acid from
[Ref.: #68371]	arbutin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23261]	cellobiose ChEBI	+	builds acid from
[Ref.: #68371]	cellobiose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23261]	citrate ChEBI	-	carbon source
[Ref.: #23261]	citrate ChEBI	+	carbon source
[Ref.: #23261]	D-arabinose ChEBI	-	builds acid from
[Ref.: #68371]	D-arabinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23261]	D-arabitol ChEBI	-	builds acid from
[Ref.: #68371]	D-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23261]	D-fructose ChEBI	+	builds acid from
[Ref.: #68371]	D-fructose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23261]	D-fucose ChEBI	-	builds acid from
[Ref.: #68371]	D-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23261]	D-galactose ChEBI	+	builds acid from
[Ref.: #68371]	D-galactose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23261]	D-glucose ChEBI	+	builds acid from
[Ref.: #23261]	D-glucose ChEBI	+	carbon source
[Ref.: #68371]	D-glucose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23261]	D-lyxose ChEBI	-	builds acid from
[Ref.: #68371]	D-lyxose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23261]	D-mannitol ChEBI	-	builds acid from
[Ref.: #23261]	D-mannitol ChEBI	-	carbon source
[Ref.: #68371]	D-mannitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23261]	D-mannose ChEBI	+	builds acid from
[Ref.: #23261]	D-mannose ChEBI	+	carbon source
[Ref.: #68371]	D-mannose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23261]	D-ribose ChEBI	+	builds acid from
[Ref.: #68371]	D-ribose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23261]	D-sorbitol ChEBI	-	builds acid from
[Ref.: #68371]	D-sorbitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23261]	D-tagatose ChEBI	-	builds acid from
[Ref.: #68371]	D-tagatose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23261]	D-xylose ChEBI	-	builds acid from
[Ref.: #68371]	D-xylose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23261]	decanoate ChEBI	-	carbon source
[Ref.: #23261]	elastin ChEBI	-	hydrolysis
[Ref.: #23261]	erythritol ChEBI	-	builds acid from
[Ref.: #68371]	erythritol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23261]	esculin ChEBI	-	builds acid from
[Ref.: #23261]	esculin ChEBI	-	hydrolysis
[Ref.: #23261]	galactitol ChEBI	-	builds acid from
[Ref.: #68371]	galactitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23261]	gelatin ChEBI	-	hydrolysis
[Ref.: #23261]	gentiobiose ChEBI	+	builds acid from
[Ref.: #68371]	gentiobiose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23261]	gluconate ChEBI	+	builds acid from
[Ref.: #23261]	gluconate ChEBI	+	carbon source
[Ref.: #68371]	gluconate ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23261]	glucose ChEBI	+	builds gas from
[Ref.: #23261]	glycerol ChEBI	+	builds acid from
[Ref.: #68371]	glycerol ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23261]	glycogen ChEBI	+	builds acid from
[Ref.: #68371]	glycogen ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23261]	inulin ChEBI	-	builds acid from
[Ref.: #68371]	inulin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23261]	L-arabinose ChEBI	-	builds acid from
[Ref.: #23261]	L-arabinose ChEBI	-	carbon source
[Ref.: #68371]	L-arabinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23261]	L-arabitol ChEBI	-	builds acid from
[Ref.: #68371]	L-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23261]	L-fucose ChEBI	-	builds acid from
[Ref.: #68371]	L-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23261]	L-rhamnose ChEBI	-	builds acid from
[Ref.: #68371]	L-rhamnose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23261]	L-sorbose ChEBI	-	builds acid from
[Ref.: #68371]	L-sorbose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23261]	L-xylose ChEBI	-	builds acid from
[Ref.: #68371]	L-xylose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23261]	lactose ChEBI	+	builds acid from
[Ref.: #68371]	lactose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23261]	malate ChEBI	+	carbon source
[Ref.: #23261]	maltose ChEBI	+	builds acid from
[Ref.: #23261]	maltose ChEBI	+	carbon source
[Ref.: #68371]	maltose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23261]	melezitose ChEBI	-	builds acid from
[Ref.: #68371]	melezitose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23261]	melibiose ChEBI	-	builds acid from
[Ref.: #68371]	melibiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23261]	methyl alpha-D-glucopyranoside ChEBI	-	builds acid from
[Ref.: #68371]	methyl alpha-D-glucopyranoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23261]	methyl alpha-D-mannoside ChEBI	-	builds acid from
[Ref.: #68371]	methyl alpha-D-mannoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23261]	methyl beta-D-xylopyranoside ChEBI	-	builds acid from
[Ref.: #68371]	methyl beta-D-xylopyranoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23261]	myo-inositol ChEBI	-	builds acid from
[Ref.: #68371]	myo-inositol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23261]	N-acetylglucosamine ChEBI	+	builds acid from
[Ref.: #23261]	N-acetylglucosamine ChEBI	+	carbon source
[Ref.: #68371]	N-acetylglucosamine ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23261]	nitrate ChEBI	+	reduction
[Ref.: #119412]	nitrate ChEBI	+	reduction
[Ref.: #119412]	nitrite ChEBI	-	reduction
[Ref.: #23261]	phenylacetate ChEBI	-	carbon source
[Ref.: #68371]	Potassium 2-ketogluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	Potassium 5-ketogluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23261]	raffinose ChEBI	-	builds acid from
[Ref.: #68371]	raffinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23261]	ribitol ChEBI	-	builds acid from
[Ref.: #68371]	ribitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23261]	salicin ChEBI	+	builds acid from
[Ref.: #68371]	salicin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23261]	starch ChEBI	+	builds acid from
[Ref.: #68371]	starch ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23261]	sucrose ChEBI	+	builds acid from
[Ref.: #68371]	sucrose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23261]	trehalose ChEBI	+	builds acid from
[Ref.: #68371]	trehalose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23261]	tryptophan ChEBI	+	energy source
[Ref.: #23261]	turanose ChEBI	-	builds acid from
[Ref.: #68371]	turanose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23261]	xylitol ChEBI	-	builds acid from
[Ref.: #68371]	xylitol ChEBI	-	builds acid from	* from API 50CH acid
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Antibiotic sensitivity	Antibiotic resistance
[Ref.: #23261]	amikacin ChEBI	yes
[Ref.: #23261]	amoxicillin ChEBI		yes
[Ref.: #23261]	aztreonam ChEBI	yes
[Ref.: #23261]	cefepime ChEBI	yes
[Ref.: #23261]	cefoperazone ChEBI	yes
[Ref.: #23261]	cefotaxime ChEBI	yes
[Ref.: #23261]	cefoxitin ChEBI	yes
[Ref.: #23261]	ceftazidime ChEBI	yes
[Ref.: #23261]	ceftriaxone ChEBI	yes
[Ref.: #23261]	cephalothin ChEBI	yes
[Ref.: #23261]	chloramphenicol ChEBI	yes
[Ref.: #23261]	ciprofloxacin ChEBI	yes
[Ref.: #23261]	erythromycin ChEBI	yes
[Ref.: #23261]	fosfomycin ChEBI	yes
[Ref.: #23261]	gentamicin ChEBI	yes
[Ref.: #23261]	imipenem ChEBI	yes
[Ref.: #23261]	kanamycin ChEBI	yes
[Ref.: #23261]	nalidixic acid ChEBI	yes
[Ref.: #23261]	streptomycin ChEBI	yes
[Ref.: #23261]	tetracycline ChEBI	yes
[Ref.: #23261]	ticarcillin ChEBI		yes
[Ref.: #23261]	tobramycin ChEBI	yes
[Ref.: #23261]	trimethoprim ChEBI	yes
[Ref.: #23261]	vibriostat ChEBI		yes
	Only first 10 entries are displayed. Click here to see all.

	Antibiotica	Group ID of combined antibiotics	Metabolite	Antibiotic resistance
[Ref.: #23261]		10	amoxicillin ChEBI	yes
[Ref.: #23261]		10	clavulanic acid ChEBI	yes

	Metabolite	Production
[Ref.: #23261]	acetoin ChEBI	no
[Ref.: #23261]	hydrogen sulfide ChEBI	no
[Ref.: #23261]	indole ChEBI	yes
[Ref.: #119412]	indole ChEBI	yes

	Physiological tests	Metabolite	Voges-Proskauer-test	Indole test
[Ref.: #23261]		acetoin ChEBI	-
[Ref.: #23261]		indole ChEBI		+

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #23261]	arginine dihydrolase	-	3.5.3.6
[Ref.: #23261]	beta-galactosidase	+	3.2.1.23
[Ref.: #68382]	beta-galactosidase	+	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #23261]	catalase	+	1.11.1.6
[Ref.: #119412]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	+	3.4.11.3	* from API zym
[Ref.: #23261]	cytochrome oxidase	+	1.9.3.1
[Ref.: #23261]	DNase	-
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	+		* from API zym
[Ref.: #23261]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	+	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #23261]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #119412]	oxidase	+
[Ref.: #68382]	trypsin	+	3.4.21.4	* from API zym
[Ref.: #23261]	tryptophan deaminase	+	4.1.99.1
[Ref.: #23261]	tryptophan deaminase	-	4.1.99.1
[Ref.: #23261]	urease	-	3.5.1.5
[Ref.: #119412]	urease	-	3.5.1.5
[Ref.: #68382]	valine arylamidase	+		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® 50CH acid:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	Acid from glycerolGLY	Acid from erythritolERY	Acid from D-arabinoseDARA	Acid from L-arabinoseLARA	Acid from D-riboseRIB	Acid from D-xyloseDXYL	Acid from L-xyloseLXYL	Acid from D-adonitolADO	Acid from methyl beta-D-xylopyranosideMDX	Acid from D-galactoseGAL	Acid from D-glucoseGLU	Acid from D-fructoseFRU	Acid from D-mannoseMNE	Acid from L-sorboseSBE	Acid from L-rhamnoseRHA	Acid from dulcitolDUL	Acid from inositolINO	Acid from D-mannitolMAN	Acid from D-sorbitolSOR	Acid from methyl alpha-D-mannopyranosideMDM	Acid from methyl alpha-D-glucopyranosideMDG	Acid from N-acetyl-glucosamineNAG	Acid from amygdalinAMY	Acid from arbutinARB	Acid from esculinESC	Acid from salicinSAL	Acid from cellobioseCEL	Acid from maltoseMAL	Acid from lactoseLAC	Acid from melibioseMEL	Acid from sucroseSAC	Acid from trehaloseTRE	Acid from inulinINU	Acid from melezitoseMLZ	Acid from raffinoseRAF	Acid from starchAMD	Acid from glycogenGLYG	Acid from xylitolXLT	Acid from gentiobioseGEN	Acid from turanoseTUR	Acid from D-lyxoseLYX	Acid from D-tagatoseTAG	Acid from D-fucoseDFUC	Acid from L-fucoseLFUC	Acid from D-arabitolDARL	Acid from L-arabitolLARL	Acid from gluconateGNT	Acid from 2-Ketogluconate2KG	Acid from 5-Ketogluconate5KG
[Ref.: #119412]	11728	not determinedn.d.	+	-	-	-	+	-	-	-	-	+	+	+	+	-	-	-	-	-	-	-	-	+	+/-	-	+/-	-	+	+	-	-	+	+	-	-	-	+	+	-	+	-	-	-	-	-	-	-	+	-	-

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #119412]	12438	-	+	+	+	+	+	+	+	+	-	+	+	-	+	-	+	-	+	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #17182]	Sample type/isolated from	river water
[Ref.: #17182]	Geographic location (country and/or sea, region)	Girona, Muga river
[Ref.: #17182]	Country	Spain
[Ref.: #17182]	Country ISO 3 Code	ESP
[Ref.: #17182]	Continent	Europe

[Ref.: #119412]	Sample type/isolated from	Environment, Water, Muga river
[Ref.: #119412]	Geographic location (country and/or sea, region)	Girona
[Ref.: #119412]	Country	Spain
[Ref.: #119412]	Country ISO 3 Code	ESP
[Ref.: #119412]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Environmental

#Aquatic

#River (Creek)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence FJ230078 (>99% sequence identity) for Aeromonas from Microbeatlas

Aquatic Samples	1144
Soil Samples	68
Animal Samples	488
Plant Samples	50
Total Samples	1750

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #17182]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #119412]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #17182]	Aeromonas fluvialis strain 717 16S ribosomal RNA gene, partial sequence	FJ230078	1503	GenBank ENA	591962 tax ID
[Ref.: #20218]	Aeromonas fluvialis strain LMG24681 isolate TTGE gel band 14 16S ribosomal RNA gene, partial sequence	JX453438	151	GenBank ENA	591962 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Aeromonas fluvialis LMG 24681	GCA_000819885	scaffold	GenBank ENA	591962 tax ID	*
[Ref.: #66792]	Aeromonas fluvialis LMG 24681	591962.3	wgs	PATRIC	591962 tax ID	*
[Ref.: #66792]	Aeromonas fluvialis LMG 24681	2639762841	draft	JGI IMG/M	591962 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Model	Trait	Prediction	Confidence in %	In training data
	Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Aeromonas fluvialis LMG 24681 NCBI: GCA_000819885.1
[Ref.: #125438]	gram-positive	gram-positiveⓘ	no	99.944	yes
[Ref.: #125438]	anaerobic	anaerobicⓘ	no	93.595	yes
[Ref.: #125438]	aerobic	aerobicⓘ	no	71.081	no
[Ref.: #125438]	spore-forming	spore-formingⓘ	no	94.295	yes
[Ref.: #125438]	thermophile	thermophilicⓘ	no	98.5	yes
[Ref.: #125438]	motile2+	flagellatedⓘ	yes	91.821	yes

	Model	Trait	Prediction	Confidence in %
	Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Aeromonas fluvialis LMG 24681 NCBI: GCA_000819885
[Ref.: #125439]	BacteriaNet	spore_formationⓘ	no	99.4
[Ref.: #125439]	BacteriaNet	motilityⓘ	yes	82.9
[Ref.: #125439]	BacteriaNet	gram_stainⓘ	negative	99.6
[Ref.: #125439]	BacteriaNet	oxygen_toleranceⓘ	obligate anaerobe	67.6

Availability in culture collections External links

[Ref.: #17182]

Culture collection no.

DSM 23621, CECT 7401, LMG 24681, CIP 110205

[Ref.: #69965]

SI-ID 356286

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Aeromonas fluvialis sp. nov., isolated from a Spanish river.	Alperi A, Martinez-Murcia AJ, Monera A, Saavedra MJ, Figueras MJ	Int J Syst Evol Microbiol	10.1099/ijs.0.011643-0	2009	*

References

#17182

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 23621

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#23261

Anabel Alperi, Antonio J. Martínez-Murcia, Arturo Monera, Maria J. Saavedra, Maria J. Figueras: Aeromonas fluvialis sp. nov., isolated from a Spanish river. IJSEM 60: 72 - 77 2010 ( DOI 10.1099/ijs.0.011643-0 , PubMed 19648345 )

#41028 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68371

Automatically annotated from API 50CH acid .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69965

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID356286.1 )

#119412 Collection of Institut Pasteur ; Curators of the CIP; CIP 110205

#125438

Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )

#125439

Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .

* These data were automatically processed and therefore are not curated

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Aeromonas fluvialis LMG 24681

Aeromonas fluvialis LMG 24681

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