Name: Aeromonas piscicola S1.2
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 282

Type strain:

Species: Aeromonas piscicola

Strain Designation: S1.2

Culture col. no.: DSM 23451, CECT 7443, LMG 24783

Strain history: <- LMG <- J. L. Romalde, University of Santiago de Compostela, Spain; S1.2 <- S. Nunez

NCBI tax ID(s): 600645 (species)

SI-ID 359331

LMG 24783, CECT 7443, CCM 7715, DSM 23451

Other strains from Aeromonas piscicola

A. piscicola WS 41047, DSM 30015

Section

Aeromonas piscicola S1.2 is a mesophilic, motile animal pathogen that was isolated from diseased wild salmon .

motile
animal pathogen
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Aeromonadales*
	Family	*Aeromonadaceae*
	Genus	*Aeromonas*
	Species	**Aeromonas piscicola**
	Full Scientific Name (LPSN)	Aeromonas piscicola Beaz-Hidalgo et al. 2010

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %99.992

[Ref.: #69480]	Motility	yes Confidence in %98.161

Information on culture and growth conditions Culture and growth conditions

[Ref.: #17216]

Culture medium

TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)

[Ref.: #17216]

Culture medium growth

[Ref.: #17216]

Culture medium link

Medium recipe at MediaDive

[Ref.: #17216]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #17216]			growth	28 °C

[Ref.: #17216]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.973

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #17216]	Sample type/isolated from	diseased wild salmon (Salmo salar)
[Ref.: #17216]	Host species	Salmo salar
[Ref.: #17216]	Geographic location (country and/or sea, region)	Carballedo, Galicia
[Ref.: #17216]	Country	Spain
[Ref.: #17216]	Country ISO 3 Code	ESP
[Ref.: #17216]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Host

#Fishes

#Salmonidae

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence HQ832417 (>99% sequence identity) for Aeromonas from Microbeatlas

Aquatic Samples	156
Soil Samples	16
Animal Samples	131
Plant Samples	10
Total Samples	313

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #17216]	Pathogenicity (animal)	yes
[Ref.: #17216]	Biosafety level	1	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #17216]	Aeromonas piscicola partial 16S rRNA gene, type strain S1.2T	FM999971	1338	ENA	600645 tax ID
[Ref.: #20218]	Aeromonas piscicola strain CECT7443 16S ribosomal RNA gene, partial sequence	HQ832417	1503	ENA	600645 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Aeromonas piscicola LMG 24783	GCA_000820005	scaffold	GenBank	600645 tax ID	*
[Ref.: #66792]	Aeromonas piscicola LMG 24783	600645.3	wgs	PATRIC	600645 tax ID	*
[Ref.: #66792]	Aeromonas piscicola LMG 24783	2648501384	draft	JGI IMG/M	600645 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Aeromonas piscicola LMG 24783 NCBI: GCA_000820005.1
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Aeromonas piscicola LMG 24783 NCBI: GCA_000820005.1
[Ref.: #69480]	motile	yes	90.198	no
[Ref.: #69480]	flagellated	yes	91.641	no
[Ref.: #69480]	gram-positive	no	98.762	no
[Ref.: #69480]	anaerobic	no	96.013	no
[Ref.: #69480]	aerobic	yes	85.945	no
[Ref.: #69480]	halophile	no	88.607	no
[Ref.: #69480]	spore-forming	no	95.661	no
[Ref.: #69480]	glucose-util	yes	90.264	no
[Ref.: #69480]	thermophile	no	99.62	yes
[Ref.: #69480]	glucose-ferment	yes	87.865	no

Availability in culture collections External links

[Ref.: #17216]

Culture collection no.

DSM 23451, CECT 7443, LMG 24783

[Ref.: #69964]

SI-ID 359331

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Aeromonas piscicola sp. nov., isolated from diseased fish.	Beaz-Hidalgo R, Alperi A, Figueras MJ, Romalde JL	Syst Appl Microbiol	10.1016/j.syapm.2009.06.004	2009	*

References

#17216

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 23451

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#69964

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID359331.1 )

* These data were automatically processed and therefore are not curated

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Aeromonas piscicola LMG 24783

Aeromonas piscicola LMG 24783

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