Name: Clostridium chauvoei 2585
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 2769

Type strain:

Species: Clostridium chauvoei

Strain Designation: 2585, 10123

Culture col. no.: DSM 7528, ATCC 10092, NCIMB 10665, CIP 104317

Strain history: CIP <- 1994, J.P. Carlier, Inst. Pasteur, Paris, France: strain 10123 <- ATCC <- C.D. Stein: strain 2585

NCBI tax ID(s): 46867 (species)

SI-ID 35178

ATCC 10092, CIP 104317, DSM 7528, NCIMB 10665, BCRC 14544, CCRC 14544, NCTC 13023

Other strains from Clostridium chauvoei

C. chauvoei Vallée, CIP 60.33
C. chauvoei CCUG 2039, ATCC 19399, NCTC 8070, ...

Section

Clostridium chauvoei 2585 is an anaerobe, mesophilic, Gram-positive human pathogen that was isolated from bovine blackleg.

Gram-positive
rod-shaped
anaerobe
human pathogen
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Clostridia*
	Order	*Eubacteriales*
	Family	*Clostridiaceae*
	Genus	*Clostridium*
	Species	**Clostridium chauvoei**
	Full Scientific Name (LPSN)	Clostridium chauvoei (Arloing et al. 1887) Scott 1928 (Approved Lists 1980)

Synonym

"Bacterium chauvoei"

Information on morphological and physiological properties Morphology

[Ref.: #118226]	Gram stain	positive

[Ref.: #118226]	Cell shape	rod-shaped

[Ref.: #118226]	Motility	no

Information on culture and growth conditions Culture and growth conditions

[Ref.: #3203]

Culture medium

RCM MEDIUM (DSMZ Medium 634)

[Ref.: #3203]

Culture medium growth

[Ref.: #3203]

Culture medium link

Medium recipe at MediaDive

[Ref.: #3203]

Culture medium composition

expand / minimize

[Ref.: #37173]

Culture medium

MEDIUM 20 - for Anaerobic bacteria

[Ref.: #37173]

Culture medium growth

[Ref.: #37173]

Culture medium composition

expand / minimize

[Ref.: #118226]

Culture medium

CIP Medium 20

[Ref.: #118226]

Culture medium growth

[Ref.: #118226]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #118226]

Culture medium

CIP Medium 187

[Ref.: #118226]

Culture medium growth

[Ref.: #118226]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #3203]			growth	37 °C
[Ref.: #37173]			growth	37 °C

[Ref.: #3203]	Temperature range	mesophilic
[Ref.: #37173]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #3203]

Oxygen tolerance

anaerobe

	Metabolite utilization	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #118226]		nitrate ChEBI	-	reduction
[Ref.: #118226]		nitrite ChEBI	-	reduction

	Metabolite production	Metabolite	Production
[Ref.: #118226]		indole ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	-	3.1.3.2	* from API zym
[Ref.: #68382]	alkaline phosphatase	-	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #118226]	catalase	-	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	-		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	-		* from API zym
[Ref.: #68382]	leucine arylamidase	-	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #118226]	oxidase	-
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #118226]	urease	-	3.5.1.5
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #118226]	7888	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #3203]	Sample type/isolated from	bovine blackleg

[Ref.: #118226]	Sample type/isolated from	Animal, Bovine, black leg
* marker position based on {}

Isolation sources categories

#Infection	#Disease	-
#Host	#Mammals	#Bovinae (Cow, Cattle)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence U51843 (>99% sequence identity) for Clostridium from Microbeatlas

Aquatic Samples	3525
Soil Samples	5709
Animal Samples	41305
Plant Samples	744
Total Samples	51283

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #3203]	Pathogenicity (human)	yes
[Ref.: #3203]	Pathogenicity (animal)	yes
[Ref.: #3203]	Biosafety level	2	Risk group (German classification) According to TRBA 466
[Ref.: #118226]	Biosafety level	2	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #3203]	Clostridium chauvoei 16S ribosomal RNA gene sequence	U51843	1507	ENA	46867 tax ID
[Ref.: #20218]	Clostridium chauvoei DNA, 16S-23S rRNA spacer region	AB040540	286	ENA	46867 tax ID	*
[Ref.: #20218]	Clostridium chauvoei DNA, 16S-23S rRNA spacer region	AB040541	363	ENA	46867 tax ID	*
[Ref.: #20218]	Clostridium chauvoei DNA, 16S-23S rRNA spacer region	AB040542	441	ENA	46867 tax ID	*
[Ref.: #20218]	Clostridium chauvoei genes for 16S rRNA, 16S-23S rRNA spacer region (rrn1), 23S rRNA, partial sequence	AB040712	324	ENA	46867 tax ID	*
[Ref.: #20218]	Clostridium chauvoei genes for 16S rRNA, tRNA-Ile, 23S rRNA, partial and complete sequence	AB040713	401	ENA	46867 tax ID	*
[Ref.: #20218]	Clostridium chauvoei genes for 16S rRNA, tRNA-Ala, tRNA-Ile, 23S rRNA, partial and complete sequence	AB040714	479	ENA	46867 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Clostridium chauvoei DSM 7528	GCA_002327185	complete	GenBank	46867 tax ID	*
[Ref.: #66792]	Clostridium chauvoei strain 12S0467	46867.40	complete	PATRIC	46867 tax ID	*
[Ref.: #66792]	Clostridium chauvoei strain 12S0467	46867.42	plasmid	PATRIC	46867 tax ID	*
[Ref.: #66792]	Clostridium chauvoei strain DSM 7528	46867.39	complete	PATRIC	46867 tax ID	*
[Ref.: #66792]	Clostridium chauvoei DSM 7528	2775507063	complete	JGI IMG/M	46867 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Clostridium chauvoei DSM 7528 NCBI: GCA_002327185.1
[Ref.: #69480]	flagellated	yes	59.488	no
[Ref.: #69480]	gram-positive	yes	91.666	no
[Ref.: #69480]	anaerobic	yes	98.368	no
[Ref.: #69480]	aerobic	no	97.274	yes
[Ref.: #69480]	halophile	no	76.105	no
[Ref.: #69480]	spore-forming	yes	94.846	no
[Ref.: #69480]	glucose-util	yes	89.818	no
[Ref.: #69480]	thermophile	no	84.76	yes
[Ref.: #69480]	motile	yes	87.821	no
[Ref.: #69480]	glucose-ferment	yes	75.829	no

Availability in culture collections External links

[Ref.: #3203]

Culture collection no.

DSM 7528, ATCC 10092, NCIMB 10665, CIP 104317

[Ref.: #72299]

SI-ID 35178

Literature:

Topic	Title	Authors	Journal	DOI	Year
Enzymology	Cloning and sequence analysis of hyaluronoglucosaminidase (nagH) gene of Clostridium chauvoei.	Dangi SK, Yadav PK, Tiwari A, Nagaleekar VK	Vet World	10.14202/vetworld.2017.1104-1107	2017	*
Genetics	First report of two complete Clostridium chauvoei genome sequences and detailed in silico genome analysis.	Thomas P, Semmler T, Eichhorn I, Lubke-Becker A, Werckenthin C, Abdel-Glil MY, Wieler LH, Neubauer H, Seyboldt C	Infect Genet Evol	10.1016/j.meegid.2017.07.018	2017	*
Enzymology	Extracellular proteins of Clostridium chauvoei are protective in a mouse model.	Mattar MA, Cortinas TI, Stefanini AM	Acta Vet Hung	10.1556/AVet.55.2007.2.1	2007	*
Enzymology	[Deoxyribonuclease activity detection in Clostridium chauvoei strains].	Carloni GH, Bentancor LD, De Torres RA	Rev Argent Microbiol		2005	*
Phylogeny	Diversity in molecular mass of the common EDTA-soluble antigens of Clostridium chauvoei and Clostridium septicum.	Hamaoka T, Terakado N, Nakamura S	Microbiol Immunol	10.1111/j.1348-0421.1994.tb01756.x	1994	*

References

#3203

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 7528

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#37173 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#72299

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID35178.1 )

#118226 Collection of Institut Pasteur ; Curators of the CIP; CIP 104317
* These data were automatically processed and therefore are not curated

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Clostridium chauvoei DSM 7528

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