Terrisporobacter mayombei SFC-5 is an anaerobe, mesophilic prokaryote that was isolated from gut, termite Cubitermes sp..
anaerobe mesophilic genome sequence 16S sequence| @ref 20215 |
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| Domain Bacillati |
| Phylum Bacillota |
| Class Clostridia |
| Order Peptostreptococcales |
| Family Peptostreptococcaceae |
| Genus Terrisporobacter |
| Species Terrisporobacter mayombei |
| Full scientific name Terrisporobacter mayombei (Kane et al. 1992) Gerritsen et al. 2014 |
| Synonyms (1) |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 2723 | SPOROMUSA ACIDOVORANS MEDIUM (DSMZ Medium 311c) | Medium recipe at MediaDive | Name: SPOROMUSA ACIDOVORANS MEDIUM (DSMZ Medium 311c; with strain-specific modifications) Composition: NaCl 2.23881 g/l D-Glucose 1.99005 g/l Casitone 1.99005 g/l Yeast extract 1.99005 g/l Na2CO3 0.995025 g/l MgSO4 x 7 H2O 0.497512 g/l NH4Cl 0.497512 g/l K2HPO4 0.348259 g/l CaCl2 x 2 H2O 0.248756 g/l KH2PO4 0.228856 g/l DL-Dithiothreitol 0.149254 g/l HCl 0.00248756 g/l FeSO4 x 7 H2O 0.00199005 g/l FeCl2 x 4 H2O 0.00149254 g/l Sodium resazurin 0.000497512 g/l NaOH 0.000497512 g/l CoCl2 x 6 H2O 0.000189055 g/l Pyridoxine hydrochloride 9.95025e-05 g/l MnCl2 x 4 H2O 9.95025e-05 g/l ZnCl2 6.96517e-05 g/l p-Aminobenzoic acid 4.97512e-05 g/l (DL)-alpha-Lipoic acid 4.97512e-05 g/l Nicotinic acid 4.97512e-05 g/l Riboflavin 4.97512e-05 g/l Thiamine HCl 4.97512e-05 g/l Calcium D-(+)-pantothenate 4.97512e-05 g/l Na2MoO4 x 2 H2O 3.58209e-05 g/l NiCl2 x 6 H2O 2.38806e-05 g/l Folic acid 1.99005e-05 g/l Biotin 1.99005e-05 g/l H3BO3 5.97015e-06 g/l Na2WO4 x 2 H2O 3.9801e-06 g/l Na2SeO3 x 5 H2O 2.98507e-06 g/l CuCl2 x 2 H2O 1.99005e-06 g/l Vitamin B12 9.95025e-07 g/l Distilled water |
| @ref | Growth | Type | Temperature (°C) | Range | |
|---|---|---|---|---|---|
| 2723 | positive | growth | 30 | mesophilic |
| 2723 | Oxygen toleranceanaerobe |
| Cat1 | Cat2 | Cat3 | |
|---|---|---|---|
| #Host | #Arthropoda | #Insecta | |
| #Host Body-Site | #Gastrointestinal tract | #Stomach |
| @ref | Sample type | Host species | Geographic location | Country | Country ISO 3 Code | Continent | |
|---|---|---|---|---|---|---|---|
| 2723 | gut, termite Cubitermes sp. | Cubitermes | Mayombe rainforest, Peoples | Republic of the Congo | COG | Africa |
Global distribution of 16S sequence FR733682 (>99% sequence identity) for Terrisporobacter from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 124043 | ASM3120228v1 assembly for Terrisporobacter mayombei DSM 6539 | complete | 1541 | 97.26 | ||||
| 66792 | ASM2074846v1 assembly for Terrisporobacter mayombei DSM 6539 | contig | 1541 | 9.17 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 2723 | Clostridium mayombei partial 16S rRNA gene, type strain DSM6539T | FR733682 | 1494 | 1541 |
| 2723 | GC-content (mol%)25.6 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 54.10 | no |
| 125438 | anaerobic | anaerobicⓘ | yes | 85.87 | no |
| 125438 | aerobic | aerobicⓘ | no | 93.13 | no |
| 125438 | spore-forming | spore-formingⓘ | yes | 66.81 | no |
| 125438 | thermophilic | thermophileⓘ | no | 90.27 | no |
| 125438 | flagellated | motile2+ⓘ | yes | 76.14 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Draft Genome Sequence of "Terrisporobacter othiniensis" Isolated from a Blood Culture from a Human Patient. | Lund LC, Sydenham TV, Hogh SV, Skov M, Kemp M, Justesen US. | Genome Announc | 10.1128/genomea.00042-15 | 2015 | ||
| Metabolism | Using gas mixtures of CO, CO2 and H2 as microbial substrates: the do's and don'ts of successful technology transfer from laboratory to production scale. | Takors R, Kopf M, Mampel J, Bluemke W, Blombach B, Eikmanns B, Bengelsdorf FR, Weuster-Botz D, Durre P. | Microb Biotechnol | 10.1111/1751-7915.13270 | 2018 | |
| Phylogeny | Terrisporobacter hibernicus sp. nov., isolated from bovine faeces in Northern Ireland. | Mitchell M, Nguyen SV, Connor M, Fairley DJ, Donoghue O, Marshall H, Koolman L, McMullan G, Schaffer KE, McGrath JW, Fanning S. | Int J Syst Evol Microbiol | 10.1099/ijsem.0.005667 | 2023 | |
| Phylogeny | Terrisporobacter petrolearius sp. nov., isolated from an oilfield petroleum reservoir. | Deng Y, Guo X, Wang Y, He M, Ma K, Wang H, Chen X, Kong D, Yang Z, Ruan Z | Int J Syst Evol Microbiol | 10.1099/ijsem.0.000450 | 2015 |
| #2723 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 6539 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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https://doi.org/10.13145/bacdive2757.20251217.10
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BacDive in 2025: the core database for prokaryotic strain data