Name: Clostridium novyi 151
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 2747

Type strain:

Species: Clostridium novyi

Strain Designation: 151

Culture col. no.: DSM 14992, ATCC 17861, JCM 1406, CCUG 57219, NCTC 13029, NCIMB 10661

Strain history: ATCC 17861 <-- L. S. McClung 151.

NCBI tax ID(s): 1542 (species)

SI-ID 44534

ATCC 17861, JCM 1406, NCIMB 10661, DSM 14992, NCTC 13029, CCUG 57219

Other strains from Clostridium novyi

C. novyi DSM 5566, ATCC 27606, VPI 8099
C. novyi chevaux, CIP 60.44
C. novyi CCUG 63580
C. novyi CCUG 70343

Section

Clostridium novyi 151 is an anaerobe, mesophilic human pathogen of the family Clostridiaceae.

anaerobe
human pathogen
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Clostridia*
	Order	*Eubacteriales*
	Family	*Clostridiaceae*
	Genus	*Clostridium*
	Species	**Clostridium novyi**
	Full Scientific Name (LPSN)	Clostridium novyi (Migula 1900) Bergey et al. 1923 (Approved Lists 1980)

Synonym

"Bacillus novyi"

Information on culture and growth conditions Culture and growth conditions

[Ref.: #5659]

Culture medium

CHOPPED MEAT MEDIUM WITH CARBOHYDRATES (DSMZ Medium 110)

[Ref.: #5659]

Culture medium growth

[Ref.: #5659]

Culture medium link

Medium recipe at MediaDive

[Ref.: #5659]

Culture medium composition

expand / minimize

[Ref.: #5659]

Culture medium

FASTIDIOUS ANAEROBE BROTH (DSMZ Medium 1203a)

[Ref.: #5659]

Culture medium growth

[Ref.: #5659]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #5659]

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

[Ref.: #5659]

Culture medium growth

[Ref.: #5659]

Culture medium link

Medium recipe provided by DSMZ

		Temperature
[Ref.: #5659]	growth	37 °C
[Ref.: #61246]	growth	37 °C
[Ref.: #67770]	growth	37 °C

[Ref.: #5659]	Temperature range	mesophilic
[Ref.: #61246]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #5659]	Oxygen tolerance	anaerobe
[Ref.: #61246]	Oxygen tolerance	anaerobe

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68380]	arginine ChEBI	-	hydrolysis	* from API rID32A
[Ref.: #68380]	D-mannose ChEBI	-	fermentation	* from API rID32A
[Ref.: #68380]	L-glutamate ChEBI	-	degradation	* from API rID32A
[Ref.: #68380]	nitrate ChEBI	-	reduction	* from API rID32A
[Ref.: #68380]	raffinose ChEBI	-	fermentation	* from API rID32A
[Ref.: #68380]	tryptophan ChEBI	-	energy source	* from API rID32A
[Ref.: #68380]	urea ChEBI	-	hydrolysis	* from API rID32A

	Metabolite production	Metabolite	Production
[Ref.: #68380]		indole ChEBI	no	* from API rID32A

	Physiological tests	Metabolite	Indole test
[Ref.: #68380]		indole ChEBI	-	* from API rID32A

	Enzyme	Enzyme activity	EC number
[Ref.: #68380]	alanine arylamidase	-	3.4.11.2	* from API rID32A
[Ref.: #68380]	alpha-arabinosidase	-	3.2.1.55	* from API rID32A
[Ref.: #68380]	alpha-fucosidase	-	3.2.1.51	* from API rID32A
[Ref.: #68380]	alpha-galactosidase	-	3.2.1.22	* from API rID32A
[Ref.: #68380]	arginine dihydrolase	-	3.5.3.6	* from API rID32A
[Ref.: #68380]	beta-galactosidase	-	3.2.1.23	* from API rID32A
[Ref.: #68380]	beta-Galactosidase 6-phosphate	-		* from API rID32A
[Ref.: #68380]	beta-glucosidase	-	3.2.1.21	* from API rID32A
[Ref.: #68380]	beta-glucuronidase	-	3.2.1.31	* from API rID32A
[Ref.: #68380]	glutamate decarboxylase	-	4.1.1.15	* from API rID32A
[Ref.: #68380]	glutamyl-glutamate arylamidase	-		* from API rID32A
[Ref.: #68380]	glycin arylamidase	-		* from API rID32A
[Ref.: #68380]	histidine arylamidase	-		* from API rID32A
[Ref.: #68380]	L-arginine arylamidase	-		* from API rID32A
[Ref.: #68380]	leucine arylamidase	-	3.4.11.1	* from API rID32A
[Ref.: #68380]	leucyl glycin arylamidase	-	3.4.11.1	* from API rID32A
[Ref.: #68380]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API rID32A
[Ref.: #68380]	phenylalanine arylamidase	-		* from API rID32A
[Ref.: #68380]	proline-arylamidase	-	3.4.11.5	* from API rID32A
[Ref.: #68380]	pyrrolidonyl arylamidase	-	3.4.19.3	* from API rID32A
[Ref.: #68380]	serine arylamidase	-		* from API rID32A
[Ref.: #68380]	tryptophan deaminase	-	4.1.99.1	* from API rID32A
[Ref.: #68380]	tyrosine arylamidase	-		* from API rID32A
[Ref.: #68380]	urease	-	3.5.1.5	* from API rID32A
	Only first 10 entries are displayed. Click here to see all.

API® rID32A:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Urease/urea hydrolysisURE	Arginine dihydrolaseADH (Arg)	alpha-Galactosidasealpha GAL	beta-Galactosidasebeta GAL	beta-Galactosidase 6-phosphatebeta GP	alpha-Glucosidasealpha GLU	beta-Glucosidasebeta GLU	alpha-Arabinosidasealpha ARA	beta-Glucuronidasebeta GUR	beta-N-Acetyl-beta-glucosaminidasebeta NAG	Fermentation of D-mannoseMNE	Fermentation of raffinoseRAF	Glutamate decarboxylaseGDC	alpha-Fucosidasealpha FUC	Reduction of nitrateNIT	Indole productionIND	Alkaline phosphatasePAL	L-arginine arylamidaseArgA	Proline arylamidaseProA	Leucyl glycin arylamidaseLGA	Phenylalanine arylamidasePheA	Leucine arylamidaseLeuA	Pyrrolidonyl arylamidasePyrA	Tyrosine arylamidaseTyrA	Alanine arylamidaseAlaA	Glycin arylamidaseGlyA	Histidine arylamidaseHisA	Glutamyl-glutamate arylamidaseGGA	Serine arylamidaseSerA
[Ref.: #5659]	13309	-	-	-	-	-	+/-	-	-	-	-	-	-	-	-	-	-	+/-	-	-	-	-	-	-	-	-	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #69479]

Global distribution of 16S sequence L37594 (>99% sequence identity) for Clostridium novyi from Microbeatlas

Aquatic Samples	461
Soil Samples	330
Animal Samples	2811
Plant Samples	62
Total Samples	3664

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #5659]	Pathogenicity (human)	yes
[Ref.: #5659]	Pathogenicity (animal)	yes
[Ref.: #5659]	Biosafety level	2	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #5659]	Clostridium novyi gene for 16S ribosomal RNA, partial sequence, strain: JCM 1406	AB536772	1474	ENA	1542 tax ID
[Ref.: #20218]	Clostridium novyi 16S ribosomal RNA	M59100	1458	ENA	1542 tax ID	*
[Ref.: #20218]	Clostridium novyi genes for 16S rRNA, 16S-23S rRNA spacer region (rrn1), 23S rRNA, partial sequence	AB040722	268	ENA	1542 tax ID	*
[Ref.: #20218]	Clostridium novyi genes for 16S rRNA, tRNA-Ala, tRNA-Ile, 23S rRNA, partial and complete sequence	AB040723	460	ENA	1542 tax ID	*
[Ref.: #20218]	Clostridium novyi genes for 16S rRNA, tRNA-Ala, tRNA-Ile, 23S rRNA, partial and complete sequence	AB040724	505	ENA	1542 tax ID	*
[Ref.: #20218]	Clostridium novyi gene for 16S rRNA, partial sequence	AB045606	1465	ENA	1542 tax ID	*
[Ref.: #20218]	Clostridium novyi 16S ribosomal RNA (16S rRNA) gene	L37594	1452	ENA	1542 tax ID	*

Availability in culture collections External links

[Ref.: #5659]

Culture collection no.

DSM 14992, ATCC 17861, JCM 1406, CCUG 57219, NCTC 13029, NCIMB 10661

[Ref.: #72277]

SI-ID 44534

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Clostridium ganghwense sp. nov., isolated from tidal flat sediment.	Kim S, Jeong H, Kim S, Chun J	Int J Syst Evol Microbiol	10.1099/ijs.0.63791-0	2006	*

References

#5659

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 14992

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#61246 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 57219
#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68380

Automatically annotated from API rID32A .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#72277

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID44534.1 )

* These data were automatically processed and therefore are not curated

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