Aeromonas salmonicida subsp. masoucida T. Kimura 1-a-1 is a facultative anaerobe, Gram-negative, rod-shaped animal pathogen that was isolated from Heart blood of salmonid .
Gram-negative rod-shaped facultative anaerobe animal pathogen genome sequence 16S sequence Bacteria| @ref 20215 |
|
|
| Domain Bacteria |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order Aeromonadales |
| Family Aeromonadaceae |
| Genus Aeromonas |
| Species Aeromonas salmonicida subsp. masoucida |
| Full scientific name Aeromonas salmonicida subsp. masoucida Kimura 1969 (Approved Lists 1980) |
| BacDive ID | Other strains from Aeromonas salmonicida subsp. masoucida (3) | Type strain |
|---|---|---|
| 165776 | A. salmonicida subsp. masoucida JCM 8235 | |
| 165777 | A. salmonicida subsp. masoucida JCM 8236 | |
| 165778 | A. salmonicida subsp. masoucida JCM 8237 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 15922 | TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) | Medium recipe at MediaDive | Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water | ||
| 38121 | MEDIUM 3 - Columbia agar | Columbia agar (39.000 g);distilled water (1000.000 ml) | |||
| 15922 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | Medium recipe at MediaDive | Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base | ||
| 122392 | CIP Medium 3 | Medium recipe at CIP | |||
| 122392 | CIP Medium 72 | Medium recipe at CIP |
| 122392 | Oxygen tolerancefacultative anaerobe |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68371 | 27613 ChEBI | amygdalin | - | builds acid from | from API 50CH acid |
| 68368 | 27613 ChEBI | amygdalin | - | fermentation | from API 20E |
| 68371 | 18305 ChEBI | arbutin | + | builds acid from | from API 50CH acid |
| 68371 | 17057 ChEBI | cellobiose | + | builds acid from | from API 50CH acid |
| 122392 | 16947 ChEBI | citrate | - | carbon source | |
| 68368 | 16947 ChEBI | citrate | - | assimilation | from API 20E |
| 68371 | 17108 ChEBI | D-arabinose | - | builds acid from | from API 50CH acid |
| 68371 | 18333 ChEBI | D-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 15824 ChEBI | D-fructose | + | builds acid from | from API 50CH acid |
| 68371 | 28847 ChEBI | D-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 12936 ChEBI | D-galactose | + | builds acid from | from API 50CH acid |
| 68371 | 17634 ChEBI | D-glucose | + | builds acid from | from API 50CH acid |
| 68368 | 17634 ChEBI | D-glucose | - | fermentation | from API 20E |
| 68371 | 62318 ChEBI | D-lyxose | - | builds acid from | from API 50CH acid |
| 68371 | 16899 ChEBI | D-mannitol | + | builds acid from | from API 50CH acid |
| 68368 | 16899 ChEBI | D-mannitol | + | fermentation | from API 20E |
| 68371 | 16024 ChEBI | D-mannose | + | builds acid from | from API 50CH acid |
| 68371 | 16988 ChEBI | D-ribose | + | builds acid from | from API 50CH acid |
| 68371 | 17924 ChEBI | D-sorbitol | - | builds acid from | from API 50CH acid |
| 68371 | 16443 ChEBI | D-tagatose | - | builds acid from | from API 50CH acid |
| 68371 | 65327 ChEBI | D-xylose | - | builds acid from | from API 50CH acid |
| 68371 | 17113 ChEBI | erythritol | - | builds acid from | from API 50CH acid |
| 68371 | 4853 ChEBI | esculin | + | builds acid from | from API 50CH acid |
| 68371 | 16813 ChEBI | galactitol | - | builds acid from | from API 50CH acid |
| 68368 | 5291 ChEBI | gelatin | + | hydrolysis | from API 20E |
| 68371 | 28066 ChEBI | gentiobiose | - | builds acid from | from API 50CH acid |
| 68371 | 24265 ChEBI | gluconate | + | builds acid from | from API 50CH acid |
| 122392 | 17234 ChEBI | glucose | + | fermentation | |
| 122392 | 17234 ChEBI | glucose | + | degradation | |
| 68371 | 17754 ChEBI | glycerol | + | builds acid from | from API 50CH acid |
| 68371 | 28087 ChEBI | glycogen | + | builds acid from | from API 50CH acid |
| 68371 | 15443 ChEBI | inulin | - | builds acid from | from API 50CH acid |
| 68371 | 30849 ChEBI | L-arabinose | + | builds acid from | from API 50CH acid |
| 68368 | 30849 ChEBI | L-arabinose | - | fermentation | from API 20E |
| 68371 | 18403 ChEBI | L-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 18287 ChEBI | L-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 62345 ChEBI | L-rhamnose | - | builds acid from | from API 50CH acid |
| 68368 | 62345 ChEBI | L-rhamnose | - | fermentation | from API 20E |
| 68371 | 17266 ChEBI | L-sorbose | - | builds acid from | from API 50CH acid |
| 68371 | 65328 ChEBI | L-xylose | - | builds acid from | from API 50CH acid |
| 122392 | 17716 ChEBI | lactose | - | fermentation | |
| 68371 | 17716 ChEBI | lactose | - | builds acid from | from API 50CH acid |
| 68368 | 25094 ChEBI | lysine | - | degradation | from API 20E |
| 122392 | 15792 ChEBI | malonate | - | assimilation | |
| 68371 | 17306 ChEBI | maltose | + | builds acid from | from API 50CH acid |
| 122392 | 29864 ChEBI | mannitol | + | fermentation | |
| 68371 | 6731 ChEBI | melezitose | - | builds acid from | from API 50CH acid |
| 68371 | 28053 ChEBI | melibiose | - | builds acid from | from API 50CH acid |
| 68368 | 28053 ChEBI | melibiose | - | fermentation | from API 20E |
| 68371 | 320061 ChEBI | methyl alpha-D-glucopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 43943 ChEBI | methyl alpha-D-mannoside | - | builds acid from | from API 50CH acid |
| 68371 | 74863 ChEBI | methyl beta-D-xylopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 17268 ChEBI | myo-inositol | - | builds acid from | from API 50CH acid |
| 68368 | 17268 ChEBI | myo-inositol | - | fermentation | from API 20E |
| 68371 | 59640 ChEBI | N-acetylglucosamine | + | builds acid from | from API 50CH acid |
| 122392 | 17632 ChEBI | nitrate | + | reduction | |
| 122392 | 16301 ChEBI | nitrite | - | reduction | |
| 68368 | 18257 ChEBI | ornithine | - | degradation | from API 20E |
| 68371 | Potassium 2-ketogluconate | - | builds acid from | from API 50CH acid | |
| 68371 | Potassium 5-ketogluconate | - | builds acid from | from API 50CH acid | |
| 68371 | 16634 ChEBI | raffinose | - | builds acid from | from API 50CH acid |
| 68371 | 15963 ChEBI | ribitol | - | builds acid from | from API 50CH acid |
| 68371 | 17814 ChEBI | salicin | + | builds acid from | from API 50CH acid |
| 122392 | 132112 ChEBI | sodium thiosulfate | - | builds gas from | |
| 68368 | 30911 ChEBI | sorbitol | - | fermentation | from API 20E |
| 68371 | 28017 ChEBI | starch | + | builds acid from | from API 50CH acid |
| 68371 | 17992 ChEBI | sucrose | + | builds acid from | from API 50CH acid |
| 68368 | 17992 ChEBI | sucrose | + | fermentation | from API 20E |
| 68371 | 27082 ChEBI | trehalose | + | builds acid from | from API 50CH acid |
| 68368 | 27897 ChEBI | tryptophan | + | energy source | from API 20E |
| 68371 | 32528 ChEBI | turanose | - | builds acid from | from API 50CH acid |
| 68368 | 16199 ChEBI | urea | - | hydrolysis | from API 20E |
| 68371 | 17151 ChEBI | xylitol | - | builds acid from | from API 50CH acid |
| @ref | Metabolite | Is sensitive | Is resistant | |
|---|---|---|---|---|
| 122392 | 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate) |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 122392 | alcohol dehydrogenase | + | 1.1.1.1 | |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | + | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 122392 | amylase | + | ||
| 68382 | beta-galactosidase | + | 3.2.1.23 | from API zym |
| 122392 | beta-galactosidase | + | 3.2.1.23 | |
| 68368 | beta-galactosidase | + | 3.2.1.23 | from API 20E |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 122392 | caseinase | + | 3.4.21.50 | |
| 122392 | catalase | + | 1.11.1.6 | |
| 68382 | cystine arylamidase | + | 3.4.11.3 | from API zym |
| 68368 | cytochrome oxidase | + | 1.9.3.1 | from API 20E |
| 122392 | DNase | + | ||
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 122392 | gamma-glutamyltransferase | + | 2.3.2.2 | |
| 122392 | gelatinase | + | ||
| 68368 | gelatinase | + | from API 20E | |
| 122392 | lecithinase | - | ||
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 122392 | lipase | - | ||
| 68382 | lipase (C 14) | - | from API zym | |
| 122392 | lysine decarboxylase | - | 4.1.1.18 | |
| 68368 | lysine decarboxylase | - | 4.1.1.18 | from API 20E |
| 68382 | N-acetyl-beta-glucosaminidase | + | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 122392 | ornithine decarboxylase | - | 4.1.1.17 | |
| 68368 | ornithine decarboxylase | - | 4.1.1.17 | from API 20E |
| 122392 | oxidase | + | ||
| 122392 | phenylalanine ammonia-lyase | + | 4.3.1.24 | |
| 122392 | protease | + | ||
| 68382 | trypsin | + | 3.4.21.4 | from API zym |
| 122392 | tryptophan deaminase | - | ||
| 68368 | tryptophan deaminase | - | 4.1.99.1 | from API 20E |
| 122392 | tween esterase | + | ||
| 122392 | urease | - | 3.5.1.5 | |
| 68368 | urease | - | 3.5.1.5 | from API 20E |
| 68382 | valine arylamidase | - | from API zym |
| @ref | ONPG | ADH (Arg) | LDC (Lys) | ODC | CIT | H2S productionH2S | URE | TDA (Trp) | IND | Acetoin production (Voges Proskauer test)VP | GEL | GLU | MAN | INO | Sor | RHA | SAC | MEL | AMY | ARA | OX | Nitrite productionNO2 | Reduction to N2N2 | MotilityMOB | Growth on MacConkey mediumMAC | OF-O | OF-F | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15922 | + | - | - | - | - | - | - | - | + | - | + | - | + | - | - | - | + | - | - | - | + | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | |
| 15922 | + | + | - | - | - | - | - | - | + | - | + | - | + | - | - | - | + | - | - | - | + | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. |
| @ref | ControlQ | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 122392 | not determinedn.d. | + | - | - | + | + | - | - | - | - | + | + | + | + | - | - | - | - | + | - | - | - | + | - | + | + | + | + | + | - | - | + | + | - | - | - | + | + | - | - | - | - | - | - | - | - | - | + | - | - |
| Cat1 | Cat2 | Cat3 | |
|---|---|---|---|
| #Host | #Fishes | #Salmonidae | |
| #Host Body-Site | #Organ | #Heart | |
| #Host Body Product | #Fluids | #Blood |
Global distribution of 16S sequence X74680 (>99% sequence identity) for Aeromonas from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 67770 | ASM64795v1 assembly for Aeromonas salmonicida subsp. masoucida NBRC 13784 | contig | 1216980 | 33.26 | ||||
| 67770 | ASM624613v1 assembly for Aeromonas salmonicida CIP 103210 | scaffold | 645 | 28.43 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Aeromonas salmonicida 16S rRNA | D11175 | 130 | 645 | ||
| 20218 | Aeromonas salmonicida 16S rRNA | D11224 | 155 | 645 | ||
| 20218 | Aeromonas salmonicida 16s rRNA | D11273 | 159 | 645 | ||
| 15922 | A.salmonicida masoucida (ATCC 27013T) gene for 16S ribosomal RNA | X74680 | 1460 | 197700 | ||
| 67770 | Aeromonas salmonicida subsp. masoucida gene for 16S rRNA, strain: JCM 7873 | AB027542 | 1467 | 197700 | ||
| 124043 | Aeromonas salmonicida subsp. masoucida gene for 16S rRNA, partial sequence, strain: NBRC 13784. | AB680514 | 1470 | 197700 | ||
| 124043 | Aeromonas salmonicida subsp. masoucida strain NBRC 13784 16S ribosomal RNA gene, partial sequence. | MN526992 | 493 | 197700 | ||
| 124043 | Aeromonas salmonicida subsp. masoucida strain NBRC 13784 16S ribosomal RNA gene, partial sequence. | KY606580 | 1412 | 197700 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 62.70 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 99.60 | no |
| 125439 | motility | BacteriaNetⓘ | yes | 87.70 | no |
| 125439 | spore_formation | BacteriaNetⓘ | no | 99.60 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 99.99 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 95.22 | yes |
| 125438 | spore-forming | spore-formingⓘ | no | 90.97 | no |
| 125438 | aerobic | aerobicⓘ | no | 71.99 | yes |
| 125438 | thermophilic | thermophileⓘ | no | 100.00 | no |
| 125438 | flagellated | motile2+ⓘ | yes | 90.50 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Isolation, Identification, and Characteristics of Aeromonas salmonicida subsp. masoucida from Diseased Starry Flounder (Platichthys stellatus). | Woo SJ, Kim SS, Kim A, Cho MY, Do JW. | Pathogens | 10.3390/pathogens14030257 | 2025 | ||
| Metabolism | Recent Insights into Aeromonas salmonicida and Its Bacteriophages in Aquaculture: A Comprehensive Review. | Park SY, Han JE, Kwon H, Park SC, Kim JH. | J Microbiol Biotechnol | 10.4014/jmb.2005.05040 | 2020 | |
| Metabolism | Green biosynthesis of floxuridine by immobilized microorganisms. | Rivero CW, Britos CN, Lozano ME, Sinisterra JV, Trelles JA. | FEMS Microbiol Lett | 10.1111/j.1574-6968.2012.02547.x | 2012 | |
| Phylogeny | Clustering subspecies of Aeromonas salmonicida using IS630 typing. | Studer N, Frey J, Vanden Bergh P. | BMC Microbiol | 10.1186/1471-2180-13-36 | 2013 | |
| Enzymology | Grouping by plasmid profiles of atypical Aeromonas salmonicida isolated from fish, with special reference to salmonid fish. | Sorum H, Holstad G, Lunder T, Hastein T. | Dis Aquat Organ | 10.3354/dao041159 | 2000 | |
| Pathogenicity | Molecular characterization of tetracycline- and quinolone-resistant Aeromonas salmonicida isolated in Korea. | Kim JH, Hwang SY, Son JS, Han JE, Jun JW, Shin SP, Choresca C, Choi YJ, Park YH, Park SC. | J Vet Sci | 10.4142/jvs.2011.12.1.41 | 2011 | |
| Comparative genomics profiling of clinical isolates of Aeromonas salmonicida using DNA microarrays. | Nash JH, Findlay WA, Luebbert CC, Mykytczuk OL, Foote SJ, Taboada EN, Carrillo CD, Boyd JM, Colquhoun DJ, Reith ME, Brown LL. | BMC Genomics | 10.1186/1471-2164-7-43 | 2006 | ||
| Phylogeny | Identification of pathogenic Vibrio species by multilocus PCR-electrospray ionization mass spectrometry and its application to aquatic environments of the former soviet republic of Georgia. | Whitehouse CA, Baldwin C, Sampath R, Blyn LB, Melton R, Li F, Hall TA, Harpin V, Matthews H, Tediashvili M, Jaiani E, Kokashvili T, Janelidze N, Grim C, Colwell RR, Huq A. | Appl Environ Microbiol | 10.1128/aem.01919-09 | 2010 | |
| Emerging Aeromonas species infections and their significance in public health. | Igbinosa IH, Igumbor EU, Aghdasi F, Tom M, Okoh AI. | ScientificWorldJournal | 10.1100/2012/625023 | 2012 | ||
| Cultivation | A medium for presumptive identification of Vibrio anguillarum. | Alsina M, Martinez-Picado J, Jofre J, Blanch AR. | Appl Environ Microbiol | 10.1128/aem.60.5.1681-1683.1994 | 1994 | |
| Characterization of plasmids in bacterial fish pathogen. | Toranzo AE, Barja JL, Colwell RR, Hetrick FM. | Infect Immun | 10.1128/iai.39.1.184-192.1983 | 1983 | ||
| Compilation of 5S rRNA and 5S rRNA gene sequences. | Specht T, Wolters J, Erdmann VA. | Nucleic Acids Res | 10.1093/nar/18.suppl.2215 | 1990 | ||
| Enzymology | Comparative genomics of Streptococcus parauberis: new target for molecular identification of serotype III. | Torres-Corral Y, Santos Y. | Appl Microbiol Biotechnol | 10.1007/s00253-020-10683-z | 2020 | |
| Metabolism | A major secreted elastase is essential for pathogenicity of Aeromonas hydrophila. | Cascon A, Yugueros J, Temprano A, Sanchez M, Hernanz C, Luengo JM, Naharro G. | Infect Immun | 10.1128/iai.68.6.3233-3241.2000 | 2000 | |
| Antibacterial and Antibiofilm Activity of Essential Oils Against Aeromonas spp. Isolated from Rainbow Trout. | Hudecova P, Koscova J, Hajduckova V, Kiraly J, Hornak P. | Animals (Basel) | 10.3390/ani14223202 | 2024 | ||
| Emergence of Aeromonas salmonicida subsp. masoucida MHJM250: unveiling pathological characteristics and antimicrobial susceptibility in golden mahseer, Tor putitora (Hamilton, 1822) in India. | Kala K, Mallik SK, Shahi N, Pathak R, Sharma P, Chandra S, Patiyal RS, Pande V, Pandey N, Pande A, Pandey PK. | Vet Res Commun | 10.1007/s11259-024-10518-6 | 2024 | ||
| Aeromonas salmonicida subsp. Masoucida causes an emerging infectious diseases and immune response in red swamp crayfish (Procambarus clarkii) | Yang Y, Mao T, Xu B, Zhu X, Zhang L, Huang Y, Zhang H, Xu J, Ai X. | Aquaculture | 2024 | |||
| Bacterial Isolates Associated with Mortality Events in Brown Trout (Salmo trutta) Restocking Farms in Spain: A Descriptive Field Study. | Vargas-Gonzalez A, Barajas M, Perez-Sanchez T. | Animals (Basel) | 10.3390/ani15172532 | 2025 | ||
| Transcriptome | Transcriptomic characterization of Atlantic salmon (Salmo salar) head kidney following administration of Aeromonas salmonicida subsp. masoucida vaccine. | Fu Q, Zhang H, Li Y, Zhang P, Gao C, Li J, Li X, Cao M, Li C. | Fish Shellfish Immunol | 10.1016/j.fsi.2022.05.022 | 2022 | |
| Development of Aeromonas salmonicida subsp. masoucida vaccine in turbot and evaluation of protection efficacy under field conditions | Yan Y, Liu Y, Mo Z, Li J, Liu S, Gao Y, Li G, Li J. | Aquaculture | 10.1016/j.aquaculture.2021.737035 | 2021 | ||
| Pathogenic characterization of Aeromonas salmonicida subsp. masoucida turbot isolate from China. | Wang P, Li J, He TT, Li N, Mo ZL, Nie P, Xie HX. | J Fish Dis | 10.1111/jfd.13224 | 2020 | ||
| Recombinant outer membrane protein C of Aeromonas salmonicida subsp. masoucida, a potential vaccine candidate for rainbow trout (Oncorhynchus mykiss). | Diao J, Li L, Fan Y, Wang S, Gai C, Wang Y, Yu X, Wang X, Xu, Liu H, Ye H. | Microb Pathog | 10.1016/j.micpath.2020.104211 | 2020 | ||
| Enzymology | Quantitative detection and reduction of potentially pathogenic bacterial groups of Aeromonas, Arcobacter, Klebsiella pneumoniae species complex, and Mycobacterium in wastewater treatment facilities. | Aoki M, Takemura Y, Kawakami S, Yoochatchaval W, Tran P T, Tomioka N, Ebie Y, Syutsubo K. | PLoS One | 10.1371/journal.pone.0291742 | 2023 | |
| A Mesophilic Aeromonas salmonicida Strain Isolated from an Unsuspected Host, the Migratory Bird Pied Avocet. | Vincent AT, Bernatchez A, Frey J, Charette SJ. | Microorganisms | 10.3390/microorganisms7120592 | 2019 | ||
| Metabolism | Purification, virulence and characterization of an extracellular peptidase produced by Aeromonas salmonicida ssp. masoucida isolated from cultured sea cucumber Apostichopus japonicus. | Yang JL, Zhan WB, Zhou L, Xing J. | Dis Aquat Organ | 10.3354/dao01970 | 2008 | |
| Transcriptome | Living in an Extremely Polluted Environment: Clues from the Genome of Melanin-Producing Aeromonas salmonicida subsp. pectinolytica 34melT. | Pavan ME, Pavan EE, Lopez NI, Levin L, Pettinari MJ. | Appl Environ Microbiol | 10.1128/aem.00903-15 | 2015 | |
| Genetics | Functional Genomics of the Aeromonas salmonicida Lipopolysaccharide O-Antigen and A-Layer from Typical and Atypical Strains. | Merino S, de Mendoza E, Canals R, Tomas JM. | Mar Drugs | 10.3390/md13063791 | 2015 |
| #15922 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 21760 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #38121 | ; Curators of the CIP; |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68368 | Automatically annotated from API 20E . |
| #68371 | Automatically annotated from API 50CH acid . |
| #68382 | Automatically annotated from API zym . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #122392 | Collection of Institut Pasteur ; Curators of the CIP; CIP 103210 |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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https://doi.org/10.13145/bacdive274.20251217.10
When using BacDive for research please cite the following paper
BacDive in 2025: the core database for prokaryotic strain data