[Ref.: #1881] |
Sample type/isolated from |
horse manure compost |
[Ref.: #1881] |
Country |
USA |
[Ref.: #1881] |
Country ISO 3 Code |
USA |
[Ref.: #1881] |
Continent |
North America |
* marker position based on {}
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Isolation sources categories |
#Engineered |
#Biodegradation |
#Composting |
#Host |
#Mammals |
#Equidae (Horse) |
#Host Body Product |
#Gastrointestinal tract |
#Feces (Stool) |
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Information on genomic background e.g. entries in nucleic sequence databass Sequence information
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16S Sequence information: |
Only first 5 entries are displayed. Click here to see all.Click here to see only first 5 entries. |
|
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Sequence accession description |
Seq. accession number |
Sequence length (bp) |
Sequence database |
Associated NCBI tax ID |
|
[Ref.: #1881] |
Clostridium thermobutyricum partial 16S rRNA gene, type strain DSM4928T, isolate Clone1 |
LT626252 |
1503 |
|
29372 tax ID |
[Ref.: #1881] |
Clostridium thermobutyricum partial 16S rRNA gene, type strain DSM4928T, isolate Clone 2 |
LT626253 |
1504 |
|
29372 tax ID |
[Ref.: #1881] |
Clostridium thermobutyricum partial 16S rRNA gene, type strain DSM4928T, isolate Clone 3 |
LT626254 |
1504 |
|
29372 tax ID |
[Ref.: #1881] |
Clostridium thermobutyricum partial 16S rRNA gene, type strain DSM4928T, isolate Clone 4 |
LT626255 |
1504 |
|
29372 tax ID |
[Ref.: #1881] |
Clostridium thermobutyricum partial 16S rRNA gene, type strain DSM4928T, isolate Clone 5 |
LT626256 |
1504 |
|
29372 tax ID |
[Ref.: #1881] |
Clostridium thermobutyricum partial 16S rRNA gene, type strain DSM4928T, isolate Clone 6 |
LT626257 |
1501 |
|
29372 tax ID |
[Ref.: #1881] |
Clostridium thermobutyricum partial 16S rRNA gene, type strain DSM4928T, isolate Clone 7 |
LT626258 |
1503 |
|
29372 tax ID |
[Ref.: #1881] |
Clostridium thermobutyricum partial 16S rRNA gene, type strain DSM4928T, isolate Clone 8 |
LT626259 |
1505 |
|
29372 tax ID |
|
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Genome sequence information: |
|
|
Sequence accession description |
Seq. accession number |
Assembly level |
Sequence database |
Associated NCBI tax ID |
|
[Ref.: #66792] |
Clostridium thermobutyricum DSM 4928 |
GCA_002050515 |
contig |
|
1121339 tax ID |
* |
[Ref.: #66792] |
Clostridium thermobutyricum DSM 4928 strain DSM 4928 |
1121339.3 |
wgs |
|
1121339 tax ID |
* |
[Ref.: #66792] |
Clostridium thermobutyricum DSM 4928 |
2916599234 |
draft |
|
29372 tax ID |
* |
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Availability in culture collections External links
[Ref.: #1881] |
Culture collection no. |
DSM 4928, ATCC 49875 |
[Ref.: #72268] |
SI-ID 42730
|
* |
|
Literature: |
|
Topic |
Title |
Authors |
Journal |
DOI |
Year |
|
Phylogeny |
Clostridium bovifaecis sp. nov., a novel acetogenic bacterium isolated from cow manure. |
Zhu H, Fu B, Lu S, Liu H, Liu H |
Int J Syst Evol Microbiol |
10.1099/ijsem.0.002928 |
2018 |
* |
Genetics |
First Insight into the Genome Sequence of Clostridium thermobutyricum DSM 4928, a Butyrate-Producing Moderate Thermophile. |
Poehlein A, Anbalagan A, Nagel A, Daniel R |
Genome Announc |
10.1128/genomeA.00367-17 |
2017 |
* |
|
- References
-
#1881 |
Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ;
DSM 4928
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#66794 |
Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg:
BRENDA, the ELIXIR core data resource in 2021: new developments and updates.
Nucleic Acids Res. 49:
D498 - D508
2020 (
DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
|
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#69479 |
João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.:
MicrobeAtlas 1.0 beta
.
|
-
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#72268 |
Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.:
StrainInfo: A central database for resolving microbial strain identifiers
.
(
DOI 10.60712/SI-ID42730.1 )
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- * These data were automatically processed and therefore are not curated
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