Name: Clostridium felsineum Wis 42-A
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 2655

Type strain:

Species: Clostridium felsineum

Strain Designation: Wis 42-A

Culture col. no.: DSM 6424, NRRL B-575

Strain history: <- NRRL; NRRL B-575 (Clostridium roseum) <- J. Naghski, Eastern Regional Research Laboratory, Agricultural Research Service, U.S. Department of Agriculture, Philadelphia, Pennsylvania, USA; Wis 42-A <- E. McCoy, University of Wisconsin, Department of Bacteriology, Madison, Wisconsin, USA

NCBI tax ID(s): 36839 (species)

SI-ID 48192

DSM 6424, NRRL B-575

Other strains from Clostridium felsineum

C. felsineum 541, DSM 794, ATCC 17788, NCIMB ... (type strain)

Section

Clostridium felsineum Wis 42-A is an anaerobe, mesophilic bacterium of the family Clostridiaceae.

anaerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Clostridia*
	Order	*Eubacteriales*
	Family	*Clostridiaceae*
	Genus	*Clostridium*
	Species	**Clostridium felsineum**
	Full Scientific Name (LPSN)	Clostridium felsineum (Carbone and Tombolato 1917) Bergey et al. 1939 (Approved Lists 1980)

	Synonym	"Bacillus* felsineus"*
	Synonym	Clostridium aurantibutyricum
	Synonym	Clostridium roseum

Information on culture and growth conditions Culture and growth conditions

[Ref.: #2662]

Culture medium

CLOSTRIDIUM ACETOBUTYLICUM MEDIUM (DSMZ Medium 411)

[Ref.: #2662]

Culture medium growth

[Ref.: #2662]

Culture medium link

Medium recipe at MediaDive

[Ref.: #2662]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #2662]			growth	35 °C

[Ref.: #2662]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #2662]

Oxygen tolerance

anaerobe

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #69479]

Global distribution of 16S sequence Y18172 (>99% sequence identity) for Clostridium from Microbeatlas

Aquatic Samples	1145
Soil Samples	1313
Animal Samples	1392
Plant Samples	134
Total Samples	3984

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #2662]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Clostridium roseum 16S rRNA gene, partial, strain DSM 6424	Y18172	1460	ENA	84029 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Clostridium felsineum DSM 6424	GCA_002006175	complete	GenBank	36839 tax ID	*
[Ref.: #66792]	Clostridium roseum strain DSM 6424	84029.8	wgs	PATRIC	84029 tax ID	*
[Ref.: #66792]	Clostridium roseum Wis 42-A	2703719318	draft	JGI IMG/M	84029 tax ID	*

[Ref.: #2662]

GC-content

29.8 mol%

sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Clostridium roseum strain DSM 6424 PATRIC: 84029.8
[Ref.: #69480]	motile	yes	77.944	no
[Ref.: #69480]	flagellated	yes	66.059	no
[Ref.: #69480]	gram-positive	yes	83.512	no
[Ref.: #69480]	anaerobic	yes	97.151	no
[Ref.: #69480]	halophile	no	95.728	no
[Ref.: #69480]	spore-forming	yes	96.882	no
[Ref.: #69480]	thermophile	no	99.13	no
[Ref.: #69480]	glucose-util	yes	90.218	no
[Ref.: #69480]	aerobic	no	97.078	yes
[Ref.: #69480]	glucose-ferment	yes	67.09	no

Availability in culture collections External links

[Ref.: #2662]

Culture collection no.

DSM 6424, NRRL B-575

[Ref.: #72185]

SI-ID 48192

References

#2662

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 6424

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#72185

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID48192.1 )

* These data were automatically processed and therefore are not curated

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Clostridium roseum strain DSM 6424

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