Clostridium felsineum (DSM 6424, NRRL B-575, Wis 42-A)

Name: Clostridium felsineum (DSM 6424, NRRL B-575, Wis 42-A)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 2655

Type strain

Strain Designation Wis 42-A

Culture col. no. DSM 6424 NRRL B-575 Wis 42-A

NCBI tax ID(s) 36839

Special Collections DSMZ

History <- NRRL; NRRL B-575 (Clostridium roseum) <- J. Naghski, Eastern Regional Research Laboratory, Agricultural Research Service, U.S. Department of Agriculture, Philadelphia, Pennsylvania, USA; Wis 42-A <- E. McCoy, University of Wisconsin, Department of Bacteriology, Madison, Wisconsin, USA

Links

Clostridium felsineum Wis 42-A is an anaerobe bacterium of the family Clostridiaceae.

anaerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 48192

DSM 6424,NRRL B-575

@ref 20215

Last LPSN update 2026-02-09 11:18:20

Domain Bacteria

Phylum Bacillota

Class Clostridia

Order Eubacteriales

Family Clostridiaceae

Genus Clostridium

Species Clostridium felsineum

Full scientific name Clostridium felsineum (Carbone and Tombolato 1917) Bergey et al. 1939 (Approved Lists 1980)

Synonyms (3)

Clostridium roseum
"Bacillus felsineus"
Clostridium aurantibutyricum

BacDive ID	Other strains from **Clostridium felsineum** (3)	Type strain
2586	C. felsineum 541, DSM 794, ATCC 17788, NCIMB 10690, JCM ... (type strain)
2543	C. felsineum 2038, 10022, DSM 793, ATCC 17777, NCIMB 10659, ...
2656	C. felsineum 653, DSM 7320, ATCC 17797

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
2662	CLOSTRIDIUM ACETOBUTYLICUM MEDIUM (DSMZ Medium 411)		Medium recipe at MediaDive	Name: CLOSTRIDIUM ACETOBUTYLICUM MEDIUM (DSMZ Medium 411) Composition: Potato 200.0 g/l D-Glucose 6.0 g/l CaCO3 2.0 g/l L-Cysteine HCl x H2O 0.5 g/l Sodium resazurin 0.0005 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
2662	positive	growth	35

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
2662	anaerobe
125439	facultative anaerobe	99.3

Spore formation

@ref	Spore formation	Confidence
125439		92

Isolation, sampling and environmental information

Taxonmaps

69479

Global distribution of 16S sequence Y18172 (>99% sequence identity) for Clostridium from Microbeatlas

Aquatic Samples	1145
Soil Samples	1313
Animal Samples	1392
Plant Samples	134
Total Samples	3984

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
2662	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	NCBI tax ID	Score	IMG accession
66792	ASM200617v2 assembly for Clostridium felsineum DSM 6424	complete	GCA_002006175	84029.8	36839	98.59
66792	Clostridium roseum Wis 42-A	complete			84029	43.78	2703719318

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20218	Clostridium roseum 16S rRNA gene, partial, strain DSM 6424	Y18172	1460		84029

GC content

@ref	GC-content (mol%)	Method
2662	29.8	sequence analysis

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Clostridium felsineum DSM 6424
NCBI: GCA_002006175

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	yes	92.00	no
125439	motility	BacteriaNetⓘ	yes	86.30	no
125439	gram_stain	BacteriaNetⓘ	positive	79.60	no
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	99.30	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Clostridium roseum strain DSM 6424
PATRIC: 84029.8

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	64.70	no
125438	anaerobic	anaerobicⓘ	yes	87.80	yes
125438	aerobic	aerobicⓘ	no	94.55	no
125438	spore-forming	spore-formingⓘ	yes	79.32	no
125438	thermophilic	thermophileⓘ	no	91.38	yes
125438	flagellated	motile2+ⓘ	yes	78.74	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Microbial solvent formation revisited by comparative genome analysis.	Poehlein A, Solano JDM, Flitsch SK, Krabben P, Winzer K, Reid SJ, Jones DT, Green E, Minton NP, Daniel R, Durre P.	Biotechnol Biofuels	10.1186/s13068-017-0742-z	2017

References

#2662	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 6424
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Clostridium felsineum (DSM 6424, NRRL B-575, Wis 42-A)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Isolation, sampling and environmental information

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_002006175

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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