Name: Clostridium felsineum 541
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 2586

Type strain:

Species: Clostridium felsineum

Strain Designation: 541

Culture col. no.: DSM 794, ATCC 17788, NCIMB 10690, JCM 1399, BCRC 14489, KCTC 5072, NRRL B-41126

Strain history: ATCC 17788 <-- L. S. McClung 541.

NCBI tax ID(s): 1121310 (strain), 36839 (species)

Section

Clostridium felsineum 541 is an anaerobe, mesophilic bacterium of the family Clostridiaceae.

anaerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	07-12-2022 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Clostridia*
	Order	*Eubacteriales*
	Family	*Clostridiaceae*
	Genus	*Clostridium*
	Species	**Clostridium felsineum**
	Full Scientific Name (LPSN)	Clostridium felsineum (Carbone and Tombolato 1917) Bergey et al. 1939 (Approved Lists 1980)

Synonym

"Bacillus felsineus"

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #69480]	Motility	yes Confidence in %92.335

Information on culture and growth conditions Culture and growth conditions

[Ref.: #451]

Culture medium

CLOSTRIDIUM ACETOBUTYLICUM MEDIUM (DSMZ Medium 411)

[Ref.: #451]

Culture medium growth

[Ref.: #451]

Culture medium link

Medium recipe at MediaDive

[Ref.: #451]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #451]			growth	37 °C
[Ref.: #67770]			growth	37 °C

[Ref.: #451]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #451]	Oxygen tolerance	anaerobe
[Ref.: #69480]	Oxygen tolerance	anaerobe Confidence in %99.057

[Ref.: #69481]	Ability of spore formation	yes Confidence in %92
[Ref.: #69480]	Ability of spore formation	yes Confidence in %100

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #451]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #451]	Clostridium felsineum DSM 794 16S ribosomal RNA gene, partial sequence	AF270502	1439	ENA	36839 tax ID
[Ref.: #67770]	Clostridium felsineum NCIMB 10690 16S ribosomal RNA gene, partial sequence	AF270501	1439	ENA	36839 tax ID
[Ref.: #67770]	Clostridium felsineum gene for 16S ribosomal RNA, partial sequence, strain: JCM 1399	LC036316	1467	ENA	36839 tax ID
[Ref.: #20218]	Clostridium felsineum 16S rRNA gene, strain DSM 794	X77851	1501	ENA	36839 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Clostridium felsineum DSM 794 DSM 794	GCA_002006355	contig	GenBank	1121310 tax ID
[Ref.: #66792]	Clostridium felsineum DSM 794 strain DSM 794	1121310.4	wgs	PATRIC	1121310 tax ID	*
[Ref.: #66792]	Clostridium felsineum 541	2703719316	draft	JGI IMG/M	36839 tax ID	*

[Ref.: #451]	GC-content	28.0-29.0 mol%
[Ref.: #451]	GC-content	26.0 mol%
[Ref.: #67770]	GC-content	26 mol%	thermal denaturation, midpoint method (Tm)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Clostridium felsineum DSM 794 strain DSM 794 PATRIC: 1121310.4
[Ref.: #69480]	spore-forming	yes	100	yes
[Ref.: #69480]	anaerobic	yes	99.057	yes
[Ref.: #69480]	gram-positive	yes	100	yes
[Ref.: #69480]	thermophile	no	96.295	yes
[Ref.: #69480]	motile	yes	92.335	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Clostridium felsineum DSM 794 strain DSM 794 PATRIC: 1121310.4
[Ref.: #69481]	spore-forming	yes	92	no

Availability in culture collections External links

[Ref.: #451]

Culture collection no.

DSM 794, ATCC 17788, NCIMB 10690, JCM 1399, BCRC 14489, KCTC 5072, NRRL B-41126

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Clostridium felsineum and Clostridium acetobutylicum are two distinct species that are phylogenetically closely related.	Tamburini E, Daly S, Steiner U, Vandini C, Mastromei G	Int J Syst Evol Microbiol	10.1099/00207713-51-3-963	2001	*
Phylogeny	Reclassification of Clostridium aurantibutyricum Hellinger 1944 and Clostridium roseum (ex McCoy and McClung 1935) Cato et al. 1988.	Schoch T, Hofele F, Odeh H, Winter LM, Stoferle S, Karl M, Bengelsdorf F, Poehlein A, Daniel R, Durre P	Int J Syst Evol Microbiol	10.1099/ijsem.0.005589	2022	*

References

#451	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 794

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

* These data were automatically processed and therefore are not curated

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Clostridium felsineum DSM 794 strain DSM 794

Clostridium felsineum DSM 794 strain DSM 794

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