Aeromonas encheleia S181 is a facultative anaerobe, chemoorganotroph, mesophilic prokaryote that was isolated from healthy eel in fresh water.
Gram-negative motile rod-shaped facultative anaerobe chemoorganotroph mesophilic genome sequence 16S sequence| @ref 20215 |
|
|
| Domain Pseudomonadati |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order Aeromonadales |
| Family Aeromonadaceae |
| Genus Aeromonas |
| Species Aeromonas encheleia |
| Full scientific name Aeromonas encheleia Esteve et al. 1995 |
| BacDive ID | Other strains from Aeromonas encheleia (5) | Type strain |
|---|---|---|
| 138085 | A. encheleia S 177, CIP 104609, CECT 4340 | |
| 146078 | A. encheleia CCUG 30345, LMG 13061 | |
| 146079 | A. encheleia CCUG 30346, LMG 13062 | |
| 146096 | A. encheleia CCUG 30365, LMG 13076 | |
| 150766 | A. encheleia CCUG 42252 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 4328 | CASO AGAR (MERCK 105458) (DSMZ Medium 220) | Medium recipe at MediaDive | Name: CASO AGAR (Merck 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water | ||
| 23255 | MacConkey agar | ||||
| 23255 | Trypticase Soy Agar (TSA) | ||||
| 41242 | MEDIUM 3 - Columbia agar | Columbia agar (39.000 g);distilled water (1000.000 ml) | |||
| 119022 | CIP Medium 3 | Medium recipe at CIP | |||
| 4328 | TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) | Medium recipe at MediaDive | Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water | ||
| 4328 | R2A MEDIUM (DSMZ Medium 830) | Medium recipe at MediaDive | Name: R2A MEDIUM (DSMZ Medium 830) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water | ||
| 4328 | TRYPTONE SOYA BROTH (TSB) (DSMZ Medium 545) | Medium recipe at MediaDive | Name: TRYPTONE SOYA BROTH (TSB) (DSMZ Medium 545) Composition: Casein peptone 17.0 g/l NaCl 5.0 g/l Soy peptone 3.0 g/l D(+)-Glucose 2.5 g/l K2HPO4 2.5 g/l Distilled water |
| @ref | Ability | Type | PH | PH range | |
|---|---|---|---|---|---|
| 23255 | positive | growth | 9.0 | alkaliphile |
| 119022 | Oxygen tolerancefacultative anaerobe |
| 23255 | Typechemoorganotroph |
| @ref | Salt | Growth | Tested relation | Concentration | |
|---|---|---|---|---|---|
| 23255 | NaCl | positive | maximum | 3 % |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 23255 | 30916 ChEBI | 2-oxoglutarate | - | carbon source | |
| 23255 | 37054 ChEBI | 3-hydroxybutyrate | - | carbon source | |
| 68369 | 17128 ChEBI | adipate | - | assimilation | from API 20NE |
| 68371 | 27613 ChEBI | amygdalin | - | builds acid from | from API 50CH acid |
| 68368 | 27613 ChEBI | amygdalin | + | fermentation | from API 20E |
| 23255 | 18305 ChEBI | arbutin | + | hydrolysis | |
| 68371 | 18305 ChEBI | arbutin | + | builds acid from | from API 50CH acid |
| 68369 | 29016 ChEBI | arginine | + | hydrolysis | from API 20NE |
| 68368 | 29016 ChEBI | arginine | + | hydrolysis | from API 20E |
| 23255 | casein | + | hydrolysis | ||
| 23255 | 17057 ChEBI | cellobiose | - | builds acid from | |
| 23255 | 17057 ChEBI | cellobiose | - | carbon source | |
| 68371 | 17057 ChEBI | cellobiose | - | builds acid from | from API 50CH acid |
| 23255 | 17029 ChEBI | chitin | + | hydrolysis | |
| 23255 | 37397 ChEBI | chondroitin sulfate | - | hydrolysis | |
| 23255 | 16947 ChEBI | citrate | - | carbon source | |
| 119022 | 16947 ChEBI | citrate | - | carbon source | |
| 68368 | 16947 ChEBI | citrate | - | assimilation | from API 20E |
| 23255 | 3815 ChEBI | collagen | + | hydrolysis | |
| 68371 | 17108 ChEBI | D-arabinose | - | builds acid from | from API 50CH acid |
| 68371 | 18333 ChEBI | D-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 15824 ChEBI | D-fructose | + | builds acid from | from API 50CH acid |
| 68371 | 28847 ChEBI | D-fucose | - | builds acid from | from API 50CH acid |
| 23255 | 12936 ChEBI | D-galactose | - | growth | |
| 23255 | 12936 ChEBI | D-galactose | + | builds acid from | |
| 68371 | 12936 ChEBI | D-galactose | + | builds acid from | from API 50CH acid |
| 23255 | 8391 ChEBI | D-gluconate | - | carbon source | |
| 68371 | 17634 ChEBI | D-glucose | + | builds acid from | from API 50CH acid |
| 68369 | 17634 ChEBI | D-glucose | + | assimilation | from API 20NE |
| 68369 | 17634 ChEBI | D-glucose | + | fermentation | from API 20NE |
| 68368 | 17634 ChEBI | D-glucose | + | fermentation | from API 20E |
| 23255 | 15748 ChEBI | D-glucuronate | - | carbon source | |
| 68371 | 62318 ChEBI | D-lyxose | - | builds acid from | from API 50CH acid |
| 23255 | 16899 ChEBI | D-mannitol | + | builds acid from | |
| 23255 | 16899 ChEBI | D-mannitol | + | carbon source | |
| 68371 | 16899 ChEBI | D-mannitol | + | builds acid from | from API 50CH acid |
| 68369 | 16899 ChEBI | D-mannitol | + | assimilation | from API 20NE |
| 68368 | 16899 ChEBI | D-mannitol | + | fermentation | from API 20E |
| 23255 | 16024 ChEBI | D-mannose | + | builds acid from | |
| 23255 | 16024 ChEBI | D-mannose | + | carbon source | |
| 68371 | 16024 ChEBI | D-mannose | + | builds acid from | from API 50CH acid |
| 68369 | 16024 ChEBI | D-mannose | + | assimilation | from API 20NE |
| 68371 | 16988 ChEBI | D-ribose | + | builds acid from | from API 50CH acid |
| 23255 | 17924 ChEBI | D-sorbitol | - | builds acid from | |
| 68371 | 17924 ChEBI | D-sorbitol | - | builds acid from | from API 50CH acid |
| 68371 | 16443 ChEBI | D-tagatose | - | builds acid from | from API 50CH acid |
| 23255 | 16551 ChEBI | D-trehalose | + | builds acid from | |
| 23255 | 16551 ChEBI | D-trehalose | + | carbon source | |
| 23255 | 65327 ChEBI | D-xylose | - | builds acid from | |
| 68371 | 65327 ChEBI | D-xylose | - | builds acid from | from API 50CH acid |
| 68369 | 27689 ChEBI | decanoate | + | assimilation | from API 20NE |
| 23255 | 16991 ChEBI | dna | + | hydrolysis | |
| 23255 | 4767 ChEBI | elastin | - | hydrolysis | |
| 23255 | 17113 ChEBI | erythritol | - | builds acid from | |
| 23255 | 17113 ChEBI | erythritol | - | carbon source | |
| 68371 | 17113 ChEBI | erythritol | - | builds acid from | from API 50CH acid |
| 23255 | 4853 ChEBI | esculin | + | hydrolysis | |
| 119022 | 4853 ChEBI | esculin | + | hydrolysis | |
| 68371 | 4853 ChEBI | esculin | + | builds acid from | from API 50CH acid |
| 68369 | 4853 ChEBI | esculin | + | hydrolysis | from API 20NE |
| 23255 | 16236 ChEBI | ethanol | - | carbon source | |
| 23255 | 29806 ChEBI | fumarate | + | carbon source | |
| 23255 | 16813 ChEBI | galactitol | - | builds acid from | |
| 23255 | 16813 ChEBI | galactitol | - | carbon source | |
| 68371 | 16813 ChEBI | galactitol | - | builds acid from | from API 50CH acid |
| 23255 | 16865 ChEBI | gamma-aminobutyric acid | + | growth | |
| 23255 | 5291 ChEBI | gelatin | + | hydrolysis | |
| 68369 | 5291 ChEBI | gelatin | + | hydrolysis | from API 20NE |
| 68368 | 5291 ChEBI | gelatin | + | hydrolysis | from API 20E |
| 68371 | 28066 ChEBI | gentiobiose | - | builds acid from | from API 50CH acid |
| 68369 | 24265 ChEBI | gluconate | + | assimilation | from API 20NE |
| 23255 | 17234 ChEBI | glucose | + | builds acid from | |
| 23255 | 17234 ChEBI | glucose | + | builds gas from | |
| 119022 | 17234 ChEBI | glucose | + | fermentation | |
| 23255 | 17754 ChEBI | glycerol | - | builds acid from | |
| 23255 | 17754 ChEBI | glycerol | + | growth | |
| 23255 | 15428 ChEBI | glycine | - | carbon source | |
| 68371 | 28087 ChEBI | glycogen | + | builds acid from | from API 50CH acid |
| 68371 | 15443 ChEBI | inulin | - | builds acid from | from API 50CH acid |
| 23255 | 16977 ChEBI | L-alanine | - | carbon source | |
| 23255 | 30849 ChEBI | L-arabinose | - | builds acid from | |
| 23255 | 30849 ChEBI | L-arabinose | - | carbon source | |
| 68369 | 30849 ChEBI | L-arabinose | - | assimilation | from API 20NE |
| 68371 | 30849 ChEBI | L-arabinose | - | builds acid from | from API 50CH acid |
| 68368 | 30849 ChEBI | L-arabinose | - | fermentation | from API 20E |
| 68371 | 18403 ChEBI | L-arabitol | - | builds acid from | from API 50CH acid |
| 23255 | 16467 ChEBI | L-arginine | - | carbon source | |
| 23255 | 29991 ChEBI | L-aspartate | - | carbon source | |
| 23255 | 16349 ChEBI | L-citrulline | - | carbon source | |
| 68371 | 18287 ChEBI | L-fucose | - | builds acid from | from API 50CH acid |
| 23255 | 29985 ChEBI | L-glutamate | - | growth | |
| 23255 | 18050 ChEBI | L-glutamine | - | carbon source | |
| 23255 | 15971 ChEBI | L-histidine | + | growth | |
| 23255 | 15603 ChEBI | L-leucine | - | carbon source | |
| 23255 | 15589 ChEBI | L-malate | + | carbon source | |
| 23255 | 17203 ChEBI | L-proline | + | carbon source | |
| 23255 | 62345 ChEBI | L-rhamnose | - | carbon source | |
| 23255 | 62345 ChEBI | L-rhamnose | + | builds acid from | |
| 68371 | 62345 ChEBI | L-rhamnose | + | builds acid from | from API 50CH acid |
| 68368 | 62345 ChEBI | L-rhamnose | + | fermentation | from API 20E |
| 23255 | 17115 ChEBI | L-serine | + | carbon source | |
| 68371 | 17266 ChEBI | L-sorbose | - | builds acid from | from API 50CH acid |
| 23255 | 17895 ChEBI | L-tyrosine | - | carbon source | |
| 68371 | 65328 ChEBI | L-xylose | - | builds acid from | from API 50CH acid |
| 23255 | 17716 ChEBI | lactose | - | builds acid from | |
| 23255 | 17716 ChEBI | lactose | - | carbon source | |
| 119022 | 17716 ChEBI | lactose | - | fermentation | |
| 68371 | 17716 ChEBI | lactose | - | builds acid from | from API 50CH acid |
| 68368 | 25094 ChEBI | lysine | - | degradation | from API 20E |
| 68369 | 25115 ChEBI | malate | + | assimilation | from API 20NE |
| 23255 | 17306 ChEBI | maltose | + | builds acid from | |
| 23255 | 17306 ChEBI | maltose | + | carbon source | |
| 68371 | 17306 ChEBI | maltose | + | builds acid from | from API 50CH acid |
| 68369 | 17306 ChEBI | maltose | + | assimilation | from API 20NE |
| 68371 | 6731 ChEBI | melezitose | - | builds acid from | from API 50CH acid |
| 23255 | 28053 ChEBI | melibiose | - | builds acid from | |
| 68371 | 28053 ChEBI | melibiose | - | builds acid from | from API 50CH acid |
| 68368 | 28053 ChEBI | melibiose | - | fermentation | from API 20E |
| 68371 | 320061 ChEBI | methyl alpha-D-glucopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 43943 ChEBI | methyl alpha-D-mannoside | - | builds acid from | from API 50CH acid |
| 68371 | 74863 ChEBI | methyl beta-D-xylopyranoside | - | builds acid from | from API 50CH acid |
| 23255 | 17268 ChEBI | myo-inositol | - | builds acid from | |
| 23255 | 17268 ChEBI | myo-inositol | - | carbon source | |
| 68371 | 17268 ChEBI | myo-inositol | - | builds acid from | from API 50CH acid |
| 68368 | 17268 ChEBI | myo-inositol | - | fermentation | from API 20E |
| 68371 | 59640 ChEBI | N-acetylglucosamine | + | builds acid from | from API 50CH acid |
| 68369 | 59640 ChEBI | N-acetylglucosamine | + | assimilation | from API 20NE |
| 23255 | 17632 ChEBI | nitrate | + | reduction | |
| 119022 | 17632 ChEBI | nitrate | + | reduction | |
| 119022 | 17632 ChEBI | nitrate | + | respiration | |
| 68369 | 17632 ChEBI | nitrate | + | reduction | from API 20NE |
| 119022 | 16301 ChEBI | nitrite | + | reduction | |
| 68368 | 18257 ChEBI | ornithine | - | degradation | from API 20E |
| 68371 | Potassium 2-ketogluconate | - | builds acid from | from API 50CH acid | |
| 68371 | Potassium 5-ketogluconate | - | builds acid from | from API 50CH acid | |
| 23255 | 17272 ChEBI | propionate | - | carbon source | |
| 23255 | 17148 ChEBI | putrescine | - | carbon source | |
| 23255 | 16634 ChEBI | raffinose | - | builds acid from | |
| 23255 | 16634 ChEBI | raffinose | - | carbon source | |
| 68371 | 16634 ChEBI | raffinose | - | builds acid from | from API 50CH acid |
| 68371 | 15963 ChEBI | ribitol | - | builds acid from | from API 50CH acid |
| 23255 | 17814 ChEBI | salicin | + | builds acid from | |
| 23255 | 17814 ChEBI | salicin | + | carbon source | |
| 68371 | 17814 ChEBI | salicin | - | builds acid from | from API 50CH acid |
| 119022 | 132112 ChEBI | sodium thiosulfate | - | builds gas from | |
| 68368 | 30911 ChEBI | sorbitol | - | fermentation | from API 20E |
| 23255 | 28017 ChEBI | starch | + | hydrolysis | |
| 68371 | 28017 ChEBI | starch | + | builds acid from | from API 50CH acid |
| 23255 | 30031 ChEBI | succinate | + | growth | |
| 23255 | 17992 ChEBI | sucrose | + | builds acid from | |
| 23255 | 17992 ChEBI | sucrose | + | carbon source | |
| 68371 | 17992 ChEBI | sucrose | + | builds acid from | from API 50CH acid |
| 68368 | 17992 ChEBI | sucrose | + | fermentation | from API 20E |
| 68371 | 27082 ChEBI | trehalose | + | builds acid from | from API 50CH acid |
| 68369 | 27897 ChEBI | tryptophan | + | energy source | from API 20NE |
| 68368 | 27897 ChEBI | tryptophan | + | energy source | from API 20E |
| 68371 | 32528 ChEBI | turanose | + | builds acid from | from API 50CH acid |
| 23255 | 53426 ChEBI | tween 80 | + | hydrolysis | |
| 23255 | 16199 ChEBI | urea | - | hydrolysis | |
| 68369 | 16199 ChEBI | urea | - | hydrolysis | from API 20NE |
| 68368 | 16199 ChEBI | urea | - | hydrolysis | from API 20E |
| 68371 | 17151 ChEBI | xylitol | - | builds acid from | from API 50CH acid |
| @ref | Metabolite | Is sensitive | Is resistant | ChEBI | |
|---|---|---|---|---|---|
| 119022 | 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate) | ||||
| 23255 | amikacin | 2637 | |||
| 23255 | amoxicillin | 2676 | |||
| 23255 | ampicillin | 28971 | |||
| 23255 | carbenicillin | 3393 | |||
| 23255 | chloramphenicol | 17698 | |||
| 23255 | erythromycin | 48923 | |||
| 23255 | fosfomycin | 28915 | |||
| 23255 | gentamicin | 17833 | |||
| 23255 | kanamycin | 6104 | |||
| 23255 | nalidixic acid | 100147 | |||
| 23255 | nitrofurantoin | 71415 | |||
| 23255 | novobiocin | 28368 | |||
| 23255 | oxolinate | 59066 | |||
| 23255 | phenoxymethylpenicillin | 27446 | |||
| 23255 | polymyxin b | 8309 | |||
| 23255 | rifampicin | 28077 | |||
| 23255 | streptomycin | 17076 | |||
| 23255 | sulfadimethoxine | 32161 | |||
| 23255 | sulfanilamide | 45373 | |||
| 23255 | tetracycline | 27902 | |||
| 23255 | tobramycin | 28864 | |||
| 23255 | trimethoprim | 45924 | |||
| 23255 | vibriostat | 73908 |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 119022 | alcohol dehydrogenase | + | 1.1.1.1 | |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | - | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 119022 | amylase | + | ||
| 23255 | arginine dihydrolase | + | 3.5.3.6 | |
| 68369 | arginine dihydrolase | + | 3.5.3.6 | from API 20NE |
| 68368 | arginine dihydrolase | + | 3.5.3.6 | from API 20E |
| 119022 | beta-galactosidase | + | 3.2.1.23 | |
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 68368 | beta-galactosidase | + | 3.2.1.23 | from API 20E |
| 68382 | beta-glucosidase | + | 3.2.1.21 | from API zym |
| 68369 | beta-glucosidase | + | 3.2.1.21 | from API 20NE |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 119022 | caseinase | + | 3.4.21.50 | |
| 23255 | catalase | + | 1.11.1.6 | |
| 119022 | catalase | + | 1.11.1.6 | |
| 68382 | cystine arylamidase | + | 3.4.11.3 | from API zym |
| 23255 | cytochrome oxidase | + | 1.9.3.1 | |
| 68369 | cytochrome oxidase | + | 1.9.3.1 | from API 20NE |
| 68368 | cytochrome oxidase | + | 1.9.3.1 | from API 20E |
| 119022 | DNase | + | ||
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 119022 | gamma-glutamyltransferase | + | 2.3.2.2 | |
| 119022 | gelatinase | - | ||
| 68369 | gelatinase | + | from API 20NE | |
| 68368 | gelatinase | + | from API 20E | |
| 119022 | lecithinase | + | ||
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68382 | lipase (C 14) | + | from API zym | |
| 23255 | lysine decarboxylase | - | 4.1.1.18 | |
| 119022 | lysine decarboxylase | + | 4.1.1.18 | |
| 68368 | lysine decarboxylase | - | 4.1.1.18 | from API 20E |
| 68382 | N-acetyl-beta-glucosaminidase | + | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 23255 | ornithine decarboxylase | - | 4.1.1.17 | |
| 119022 | ornithine decarboxylase | - | 4.1.1.17 | |
| 68368 | ornithine decarboxylase | - | 4.1.1.17 | from API 20E |
| 119022 | oxidase | + | ||
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 68368 | tryptophan deaminase | - | 4.1.99.1 | from API 20E |
| 119022 | tween esterase | + | ||
| 119022 | urease | - | 3.5.1.5 | |
| 68369 | urease | - | 3.5.1.5 | from API 20NE |
| 68368 | urease | - | 3.5.1.5 | from API 20E |
| 68382 | valine arylamidase | + | from API zym |
| @ref | ONPG | ADH (Arg) | LDC (Lys) | ODC | CIT | H2S productionH2S | URE | TDA (Trp) | IND | Acetoin production (Voges Proskauer test)VP | GEL | GLU | MAN | INO | Sor | RHA | SAC | MEL | AMY | ARA | OX | Nitrite productionNO2 | Reduction to N2N2 | MotilityMOB | Growth on MacConkey mediumMAC | OF-O | OF-F | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4328 | + | + | - | - | - | - | - | - | + | - | + | + | + | - | - | + | + | - | + | - | + | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. |
| @ref | ControlQ | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 119022 | not determinedn.d. | +/- | - | - | - | + | - | - | - | - | + | + | + | + | - | + | - | - | + | - | - | - | + | - | + | + | - | - | + | - | - | + | + | - | - | - | + | + | - | - | + | - | - | - | - | - | - | +/- | - | - |
Global distribution of 16S sequence HQ832414 (>99% sequence identity) for Aeromonas from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | PRJEB7027 assembly for Aeromonas encheleia CECT 4342 | scaffold | 73010 | 68.43 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | no | 99.20 | no |
| 125439 | motility | BacteriaNetⓘ | yes | 82.20 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 99.40 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate anaerobe | 68.10 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 99.99 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 96.27 | no |
| 125438 | aerobic | aerobicⓘ | no | 71.29 | no |
| 125438 | spore-forming | spore-formingⓘ | no | 90.68 | no |
| 125438 | thermophilic | thermophileⓘ | no | 100.00 | yes |
| 125438 | flagellated | motile2+ⓘ | yes | 90.11 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Bacterial Isolates Associated with Mortality Events in Brown Trout (Salmo trutta) Restocking Farms in Spain: A Descriptive Field Study. | Vargas-Gonzalez A, Barajas M, Perez-Sanchez T. | Animals (Basel) | 10.3390/ani15172532 | 2025 | ||
| Enzymology | Simultaneous detection of Aeromonas salmonicida, Flavobacterium psychrophilum, and Yersinia ruckeri, three major fish pathogens, by multiplex PCR. | Del Cerro A, Marquez I, Guijarro JA. | Appl Environ Microbiol | 10.1128/aem.68.10.5177-5180.2002 | 2002 | |
| Phylogeny | Inclusion of Aeromonas DNA hybridization group 11 in Aeromonas encheleia and extended descriptions of the species Aeromonas eucrenophila and A. encheleia. | Huys G, Kampfer P, Altwegg M, Coopman R, Janssen P, Gillis M, Kersters K | Int J Syst Bacteriol | 10.1099/00207713-47-4-1157 | 1997 | |
| Phylogeny | Aeromonas encheleia sp. nov., isolated from European eels. | Esteve C, Gutierrez MC, Ventosa A | Int J Syst Bacteriol | 10.1099/00207713-45-3-462 | 1995 |
| #4328 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 11577 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #23255 | Consuelo Esteve, M. Carmen Gutiérrez, Antonio Ventosa: Aeromonas encheleia sp. nov., Isolated from European Eels. IJSEM 45: 462 - 466 1995 ( DOI 10.1099/00207713-45-3-462 , PubMed 8590673 ) |
| #41242 | ; Curators of the CIP; |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #68368 | Automatically annotated from API 20E . |
| #68369 | Automatically annotated from API 20NE . |
| #68371 | Automatically annotated from API 50CH acid . |
| #68382 | Automatically annotated from API zym . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #119022 | Collection of Institut Pasteur ; Curators of the CIP; CIP 104608 |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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https://doi.org/10.13145/bacdive258.20251217.10
When using BacDive for research please cite the following paper
BacDive in 2025: the core database for prokaryotic strain data