Aeromonas caviae B-968 | Type strain | DSM 7323, ATCC 15468, NRRL B-968, WDCM 00062, NCTC 12244, JCM 1060, BCRC 16001, CCM 4491, CCUG 25939, CECT 838, CGMCC 1.1960, CIP 76.16, GTC 00465, LMG 12160, LMG 3775, NCAIM B.01931, NCIMB 13016, CIP 110812

Culture medium

CIP Medium 3

Culture medium growth

Culture medium link

Culture medium

CIP Medium 72

Culture medium growth

Culture medium link

[Ref.: #117223]

Culture medium

CIP Medium 72

[Ref.: #117223]

Culture medium growth

[Ref.: #117223]

Culture medium link

Culture medium

TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)

Culture medium growth

Culture medium link

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

Culture medium growth

Culture medium link

What are isolation sources categories?

	Kind of temperature		Temperature
[Ref.: #2998]		growth	30 °C
[Ref.: #2998]		growth	28 °C
[Ref.: #36285]		growth	30 °C
[Ref.: #41809]		growth	30 °C
[Ref.: #67770]		growth	30 °C
[Ref.: #117222]		growth	30-37 °C
[Ref.: #117222]	negative	growth	5 °C
[Ref.: #117222]	negative	growth	10 °C
[Ref.: #117222]	negative	growth	41 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #117222]	Oxygen tolerance	facultative anaerobe
[Ref.: #125439]	Oxygen tolerance	obligate anaerobe Confidence in %93.4

[Ref.: #125439]	Ability of spore formation	no Confidence in %96.6
[Ref.: #125438]	Ability of spore formation	no Confidence in %94.129

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68368]	amygdalin ChEBI	+	fermentation	* from API 20E
[Ref.: #68368]	arginine ChEBI	+	hydrolysis	* from API 20E
[Ref.: #117222]	citrate ChEBI	-	carbon source
[Ref.: #68368]	citrate ChEBI	-	assimilation	* from API 20E
[Ref.: #68368]	D-glucose ChEBI	+	fermentation	* from API 20E
[Ref.: #68368]	D-mannitol ChEBI	+	fermentation	* from API 20E
[Ref.: #68368]	gelatin ChEBI	+	hydrolysis	* from API 20E
[Ref.: #117222]	glucose ChEBI	+	fermentation
[Ref.: #117222]	glucose ChEBI	+	degradation
[Ref.: #68368]	L-arabinose ChEBI	+	fermentation	* from API 20E
[Ref.: #68368]	L-rhamnose ChEBI	-	fermentation	* from API 20E
[Ref.: #117222]	lactose ChEBI	-	fermentation
[Ref.: #68368]	lysine ChEBI	-	degradation	* from API 20E
[Ref.: #117222]	malonate ChEBI	-	assimilation
[Ref.: #117222]	mannitol ChEBI	+	fermentation
[Ref.: #68368]	melibiose ChEBI	-	fermentation	* from API 20E
[Ref.: #68368]	myo-inositol ChEBI	-	fermentation	* from API 20E
[Ref.: #117222]	nitrate ChEBI	+	reduction
[Ref.: #117222]	nitrite ChEBI	+	reduction
[Ref.: #68368]	ornithine ChEBI	-	degradation	* from API 20E
[Ref.: #117222]	sodium thiosulfate ChEBI	-	builds gas from
[Ref.: #68368]	sorbitol ChEBI	-	fermentation	* from API 20E
[Ref.: #68368]	sucrose ChEBI	+	fermentation	* from API 20E
[Ref.: #68368]	tryptophan ChEBI	+	energy source	* from API 20E
[Ref.: #68368]	urea ChEBI	-	hydrolysis	* from API 20E
	Only first 10 entries are displayed. Click here to see all.

	Antibiotica	Metabolite	Antibiotic sensitivity	Antibiotic resistance
[Ref.: #117222]		0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)	no	yes

	Metabolite	Production
[Ref.: #117222]	indole ChEBI	yes
[Ref.: #68368]	hydrogen sulfide ChEBI	no	* from API 20E
[Ref.: #68368]	indole ChEBI	yes	* from API 20E

	Metabolite	Voges-Proskauer-test	Methylred-test	Indole test
[Ref.: #117222]	acetoin ChEBI	-
[Ref.: #117222]	glucose ChEBI		+
[Ref.: #68368]	indole ChEBI			+	* from API 20E

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #117222]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #117222]	amylase	-
[Ref.: #68368]	arginine dihydrolase	+	3.5.3.6	* from API 20E
[Ref.: #117222]	beta-galactosidase	+	3.2.1.23
[Ref.: #68382]	beta-galactosidase	+	3.2.1.23	* from API zym, API 20E
[Ref.: #68382]	beta-glucosidase	+	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	+	3.2.1.31	* from API zym
[Ref.: #117222]	caseinase	-	3.4.21.50
[Ref.: #117222]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68368]	cytochrome oxidase	+	1.9.3.1	* from API 20E
[Ref.: #117222]	DNase	+
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #117222]	gelatinase	+/-
[Ref.: #68368]	gelatinase	+		* from API 20E
[Ref.: #117222]	lecithinase	-
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #117222]	lipase	-
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #117222]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68368]	lysine decarboxylase	-	4.1.1.18	* from API 20E
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	+	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #117222]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #68368]	ornithine decarboxylase	-	4.1.1.17	* from API 20E
[Ref.: #117222]	oxidase	+
[Ref.: #117222]	phenylalanine ammonia-lyase	-	4.3.1.24
[Ref.: #68382]	trypsin	+	3.4.21.4	* from API zym
[Ref.: #117222]	tryptophan deaminase	-
[Ref.: #117222]	tween esterase	-
[Ref.: #117222]	urease	-	3.5.1.5
[Ref.: #68368]	urease	-	3.5.1.5	* from API 20E
[Ref.: #68382]	valine arylamidase	+		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® 20E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	beta-GalactosidaseONPG	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Ornithine decarboxylaseODC	Citrate utilizationCIT	H2S productionH2S	Urease/urea hydrolysisURE	Tryptophan deaminaseTDA (Trp)	Indole productionIND	Acetoin production (Voges Proskauer test)VP	Gelatinase/gelatin hydrolysisGEL	Fermentation/oxidation of D-glucoseGLU	Fermentation/oxidation of D-mannitolMAN	Fermentation/oxidation of inositolINO	Fermentation/oxidation of sorbitolSor	Fermentation/oxidation of L-rhamnoseRHA	Fermentation/oxidation of sucroseSAC	Fermentation/oxidation of melibioseMEL	Fermentation/oxidation of amygdalinAMY	Fermentation/oxidation of L-arabinoseARA	Cytochrome oxidaseOX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	Oxidative catabolisation of D-glucoseOF-O	Fermentation of D-glucoseOF-F
[Ref.: #2998]	18426	+	+	-	-	-	-	-	+/-	+	-	+	+	+	-	-	-	+	-	+	+	+	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.
[Ref.: #2998]	18420	+	+	-	-	-	-	-	-	+	+	+	+	+	-	-	-	+	-	+	+	+	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API® Biotype100:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
[Ref.: #117222]	3345	not determinedn.d.	+	+	+	+	-	-	-	+	-	+	+	+	-	+	-	+	-	+	+	+	+	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	+	+	-	-	-	-	-	-	-	-	-	-	-	+	-	-	+	+	-	+	+	+	-	+	-	-	-	+	-	-	+	+	+	+	-	+	-	-	-	-

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #117222]	13294	-	+	+	+	-	+	+	-	+	-	+	+	-	+	+	-	+	+	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #2998]	Sample type/isolated from	Epizootic of young guinea pigs
[Ref.: #2998]	Country	USA
[Ref.: #2998]	Country ISO 3 Code	USA
[Ref.: #2998]	Continent	North America

[Ref.: #67770]	Sample type/isolated from	Epizootic of young guinea pigs

[Ref.: #117222]	Sample type/isolated from	Epizootic among young guinea pigs

[Ref.: #117223]	Sample type/isolated from	Epizootic of young guinea pigs
[Ref.: #117223]	Country	United States of America
[Ref.: #117223]	Country ISO 3 Code	USA
[Ref.: #117223]	Continent	North America
* marker position based on {}

Isolation sources categories

#Infection	#Disease	-
#Host	#Mammals	#Suidae (Pig,Swine)

[Ref.: #69479]

Global distribution of 16S sequence X60408 (>99% sequence identity) for Aeromonas from Microbeatlas

Aquatic Samples	400
Soil Samples	45
Animal Samples	595
Plant Samples	47
Total Samples	1087

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #2998]	Pathogenicity (human)	yes
[Ref.: #2998]	Pathogenicity (animal)	yes
[Ref.: #2998]	Biosafety level	2	Risk group (German classification) According to TRBA 466
[Ref.: #117222]	Biosafety level	1	Risk group (French classification)
[Ref.: #117223]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #2998]	A.caviae (ATCC 15468T) gene for 16S ribosomal RNA	X74674	1460	GenBank ENA	648 tax ID
[Ref.: #124043]	Aeromonas caviae strain CECT 838 16S ribosomal RNA gene, partial sequence.	ON872251	761	GenBank ENA	648 tax ID	*
[Ref.: #20218]	Aeromonas caviae strain ATCC15468 16S-23S ribosomal RNA intergenic spacer region type 1	AF198363	476	GenBank ENA	648 tax ID	*
[Ref.: #20218]	Aeromonas caviae strain ATCC15468 16S-23S ribosomal RNA intergenic spacer region type 2	AF198364	521	GenBank ENA	648 tax ID	*
[Ref.: #20218]	Aeromonas caviae strain ATCC15468 16S-23S ribosomal RNA intergenic spacer region type 3	AF198365	592	GenBank ENA	648 tax ID	*
[Ref.: #20218]	Aeromonas punctata strain ATCC 15468 clone 1 16S-23S ribosomal RNA intergenic spacer, complete sequence	EF373978	471	GenBank ENA	648 tax ID	*
[Ref.: #20218]	Aeromonas punctata strain ATCC 15468 clone 3 16S-23S ribosomal RNA intergenic spacer, complete sequence	EF373979	471	GenBank ENA	648 tax ID	*
[Ref.: #20218]	Aeromonas punctata strain ATCC 15468 clone 2 16S-23S ribosomal RNA intergenic spacer, complete sequence	EF373996	471	GenBank ENA	648 tax ID	*
[Ref.: #20218]	Aeromonas punctata strain ATCC 15468 clone 4 16S-23S ribosomal RNA intergenic spacer, complete sequence	EF373997	587	GenBank ENA	648 tax ID	*
[Ref.: #20218]	Aeromonas caviae strain CECT 838 16S ribosomal RNA gene, partial sequence	JX014442	151	GenBank ENA	648 tax ID	*
[Ref.: #20218]	Aeromonas caviae gene for 16S rRNA, partial sequence, strain: JCM 1060	AB626132	1467	GenBank ENA	648 tax ID	*
[Ref.: #20218]	Aeromonas caviae 16S rRNA	D11169	214	GenBank ENA	648 tax ID	*
[Ref.: #20218]	Aeromonas caviae 16S rRNA	D11218	215	GenBank ENA	648 tax ID	*
[Ref.: #20218]	Aeromonas caviae 16S rRNA	D11267	200	GenBank ENA	648 tax ID	*
[Ref.: #20218]	Aeromonas caviae 16S rRNA gene, strain NCIMB 13016	X60408	1503	GenBank ENA	648 tax ID	*

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Aeromonas caviae CECT 838	GCA_000819785	scaffold	GenBank ENA	648 tax ID
[Ref.: #66792]	Aeromonas caviae CECT 838	GCA_018360005	contig	GenBank ENA	648 tax ID	*
[Ref.: #66792]	Aeromonas caviae CECT 838	648.21	wgs	PATRIC	648 tax ID	*
[Ref.: #66792]	Aeromonas caviae strain CECT 838	648.319	wgs	PATRIC	648 tax ID	*
[Ref.: #66792]	Aeromonas caviae strain NCTC12244	648.115	complete	PATRIC	648 tax ID	*
[Ref.: #66792]	Aeromonas caviae NCTC 12244	2852469294	complete	JGI IMG/M	648 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Model	Trait	Prediction	Confidence in %	In training data
	Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Aeromonas caviae NCTC12244 NCBI: GCA_900476005.1
[Ref.: #125438]	gram-positive	gram-positiveⓘ	no	99.994	no
[Ref.: #125438]	anaerobic	anaerobicⓘ	no	96.343	yes
[Ref.: #125438]	aerobic	aerobicⓘ	no	73.522	yes
[Ref.: #125438]	spore-forming	spore-formingⓘ	no	94.129	no
[Ref.: #125438]	thermophile	thermophilicⓘ	no	100	no
[Ref.: #125438]	motile2+	flagellatedⓘ	yes	89.604	no

	Model	Trait	Prediction	Confidence in %
	Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Aeromonas caviae NCTC12244 NCBI: GCA_900476005
[Ref.: #125439]	BacteriaNet	spore_formationⓘ	no	96.6
[Ref.: #125439]	BacteriaNet	motilityⓘ	yes	74.4
[Ref.: #125439]	BacteriaNet	gram_stainⓘ	negative	97.6
[Ref.: #125439]	BacteriaNet	oxygen_toleranceⓘ	obligate anaerobe	93.4

Availability in culture collections External links