Name: Desulfurispirillum alkaliphilum SR 1
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 2496

Type strain:

Species: Desulfurispirillum alkaliphilum

Strain Designation: SR 1

Culture col. no.: DSM 18274, JCM 15827, UNIQEM U250

Strain history: D. Y. Sorokin SR1.

NCBI tax ID(s): 393030 (species)

SI-ID 400664

DSM 18274

Section

Desulfurispirillum alkaliphilum SR 1 is an anaerobe, mesophilic bacterium that was isolated from sulfide-removing bioreactor.

anaerobe
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Chrysiogenota*
	Class	*Chrysiogenia*
	Order	*Chrysiogenales*
	Family	*Chrysiogenaceae*
	Genus	*Desulfurispirillum*
	Species	**Desulfurispirillum alkaliphilum**
	Full Scientific Name (LPSN)	Desulfurispirillum alkaliphilum Sorokin et al. 2010

Information on culture and growth conditions Culture and growth conditions

[Ref.: #7480]

Culture medium

DESULFURISPIRILLUM MEDIUM (DSMZ Medium 1239)

[Ref.: #7480]

Culture medium growth

[Ref.: #7480]

Culture medium link

Medium recipe at MediaDive

[Ref.: #7480]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #7480]			growth	28 °C
[Ref.: #67770]			growth	30 °C

[Ref.: #7480]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #7480]

Oxygen tolerance

anaerobe

[Ref.: #67770]

Observation

quinones: MK-8

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #7480]	Sample type/isolated from	sulfide-removing bioreactor
[Ref.: #7480]	Country	Netherlands
[Ref.: #7480]	Country ISO 3 Code	NLD
[Ref.: #7480]	Continent	Europe

[Ref.: #67770]	Sample type/isolated from	Tiopaq bioreactor, removing H₂S from biogas
[Ref.: #67770]	Geographic location (country and/or sea, region)	Eerbeek
[Ref.: #67770]	Country	Netherlands
[Ref.: #67770]	Country ISO 3 Code	NLD
[Ref.: #67770]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Engineered

#Bioreactor

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence DQ666683 (>99% sequence identity) for Desulfurispirillum from Microbeatlas

Aquatic Samples	445
Soil Samples	166
Animal Samples	3918
Plant Samples	47
Total Samples	4576

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #7480]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #7480]	Desulfurispirillum alkaliphilum strain SR 1 16S ribosomal RNA gene, partial sequence	DQ666683	1446	ENA	393030 tax ID
[Ref.: #20218]	Desulfurispirillum alkaliphilum strain SR1 16S ribosomal RNA gene, partial sequence	JQ346730	1375	ENA	393030 tax ID	*

[Ref.: #7480]

GC-content

44.8 mol%

thermal denaturation, midpoint method (Tm)

Availability in culture collections External links

[Ref.: #7480]

Culture collection no.

DSM 18274, JCM 15827, UNIQEM U250

[Ref.: #72033]

SI-ID 400664

Literature:

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Desulfurispirillum alkaliphilum gen. nov. sp. nov., a novel obligately anaerobic sulfur- and dissimilatory nitrate-reducing bacterium from a full-scale sulfide-removing bioreactor.	Sorokin DY, Foti M, Tindall BJ, Muyzer G	Extremophiles	10.1007/s00792-006-0048-8	2007	*

References

#7480

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 18274

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#72033

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID400664.1 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Desulfurispirillum alkaliphilum in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF