Methylomarinovum caldicuralii (DSM 19749, JCM 13666, IT-9)

Name: Methylomarinovum caldicuralii (DSM 19749, JCM 13666, IT-9)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 24813

Type strain

Strain Designation IT-9

Culture col. no. DSM 19749 JCM 13666 IT-9

NCBI tax ID(s) 438856

Special Collections DSMZ JCM

Links

Methylomarinovum caldicuralii IT-9 is a thermophilic prokaryote that was isolated from submarine hot spring water in coral reefs.

thermophilic 16S sequence

Name and taxonomic classification

SI-ID 404550

JCM 13666,DSM 19749

@ref 20215

Last LPSN update 2025-12-16 09:52:57

Domain Pseudomonadati

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Methylococcales

Family Methylothermaceae

Genus Methylomarinovum

Species Methylomarinovum caldicuralii

Full scientific name Methylomarinovum caldicuralii Hirayama et al. 2014

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
21320	METHYLOTHERMUS MEDIUM (DSMZ Medium 1412)		Medium recipe at MediaDive	Name: METHYLOTHERMUS MEDIUM (DSMZ Medium 1412) Composition: KCl 33.0 g/l NaCl 3.0 g/l NaHCO3 2.5 g/l MgCl2 x 6 H2O 0.42 g/l MgSO4 x 7 H2O 0.34 g/l NaNO3 0.25 g/l NH4Cl 0.25 g/l CaCl2 x 2 H2O 0.08 g/l Fe2(SO4)3 x n H2O 0.02 g/l KH2PO4 0.014 g/l Nitrilotriacetic acid 0.0045 g/l MnSO4 x 2 H2O 0.0015 g/l ZnSO4 x 7 H2O 0.00054 g/l CoSO4 x 7 H2O 0.00054 g/l Na2SeO3 x 5 H2O 0.0005 g/l NiCl2 x 6 H2O 0.0005 g/l Na2SiO3 x 9 H2O 0.0002 g/l AlK(SO4)2 x 12 H2O 6e-05 g/l H3BO4 3e-05 g/l Na2MoO4 x 2 H2O 3e-05 g/l CuSO4 x 5 H2O 3e-05 g/l Pyridoxine hydrochloride 1e-05 g/l Thiamine HCl 5e-06 g/l Riboflavin 5e-06 g/l Nicotinic acid 5e-06 g/l D-Calcium pantothenate 5e-06 g/l p-Aminobenzoic acid 5e-06 g/l Lipoic acid 5e-06 g/l Folic acid 2e-06 g/l Biotin 2e-06 g/l Vitamin B12 1e-07 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
21320	positive	growth	45	thermophilic
67770	positive	growth	45	thermophilic

Physiology and metabolism

Observation

67770

Observationquinones: Q-8

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Coral reef
#Environmental	#Aquatic	#Marine
#Environmental	#Aquatic	#Thermal spring
#Condition	#Thermophilic (>45°C)	-

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
21320	submarine hot spring water in coral reefs	off Taketomi Island, Okinawa at a depth of 23 m	Japan	JPN	Asia
67770	Shallow submarine hydrothermal system off Taketomi Island	Okinawa	Japan	JPN	Asia

Taxonmaps

69479

Global distribution of 16S sequence AB301718 (>99% sequence identity) for Methylomarinovum caldicuralii subclade from Microbeatlas

Aquatic Samples	67
Soil Samples	4
Animal Samples	5
Plant Samples
Total Samples	76

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
21320	1	Risk group (German classification)

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
21320	Methylomarinovum caldicuralii gene for 16S ribosomal RNA, partial sequence	AB301718	1466		438856

GC content

@ref	GC-content (mol%)	Method
21320	66.0	high performance liquid chromatography (HPLC)
67770	66	high performance liquid chromatography (HPLC)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Diversity and Habitat Preferences of Cultivated and Uncultivated Aerobic Methanotrophic Bacteria Evaluated Based on pmoA as Molecular Marker.	Knief C.	Front Microbiol	10.3389/fmicb.2015.01346	2015
Phylogeny	Methylomarinovum caldicuralii gen. nov., sp. nov., a moderately thermophilic methanotroph isolated from a shallow submarine hydrothermal system, and proposal of the family Methylothermaceae fam. nov.	Hirayama H, Abe M, Miyazaki M, Nunoura T, Furushima Y, Yamamoto H, Takai K	Int J Syst Evol Microbiol	10.1099/ijs.0.058172-0	2013

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#21320	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 19749
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Methylomarinovum caldicuralii (DSM 19749, JCM 13666, IT-9)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Observation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

BacDive

Help

Social Media