Name: Thermoactinomyces daqus H-18
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 24642

Type strain:

Species: Thermoactinomyces daqus

Strain Designation: H-18

Culture col. no.: DSM 45914, CICC 10681

Strain history: <- Y. Ge, China National Research Inst. of Food & Fermentation Industries, Beijing; H-18 <- M. Zhang

NCBI tax ID(s): 1329516 (species)

Section

Thermoactinomyces daqus H-18 is a bacterium that was isolated from high-temperature daqu, a fermentation starter used in the production of a sesame-flavour liquor.

16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Thermoactinomycetaceae*
	Genus	*Thermoactinomyces*
	Species	**Thermoactinomyces daqus**
	Full Scientific Name (LPSN)	Thermoactinomyces daqus Yao et al. 2014

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #20866]	Sample type/isolated from	high-temperature daqu, a fermentation starter used in the production of a sesame-flavour liquor
[Ref.: #20866]	Geographic location (country and/or sea, region)	Shandong Province, Zibo, Shandong Bandaojing Co. Ltd
[Ref.: #20866]	Country	China
[Ref.: #20866]	Country ISO 3 Code	CHN
[Ref.: #20866]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Engineered	#Food production	#Fermented
#Condition	#Thermophilic (>45°C)	-
#Engineered	#Food production	#Beverage

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KF590624 (>99% sequence identity) for Thermoactinomycetaceae from Microbeatlas

Aquatic Samples	1922
Soil Samples	7337
Animal Samples	1670
Plant Samples	1617
Total Samples	12546

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #20866]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20866]	Thermoactinomyces daqus strain H-18 16S ribosomal RNA gene, partial sequence	KF590624	1506	ENA	1329516 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Thermoactinomyces daqus H-18	GCA_000763315	contig	GenBank	1329516 tax ID	*
[Ref.: #66792]	Thermoactinomyces daqus H-18	1329516.3	wgs	PATRIC	1329516 tax ID	*
[Ref.: #66792]	Thermoactinomyces daqus H-18	2617271285	draft	JGI IMG/M	1329516 tax ID	*

[Ref.: #20866]

GC-content

49.1 mol%

high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Thermoactinomyces daqus H-18 PATRIC: 1329516.3
[Ref.: #69480]	motile	no	89.147	no
[Ref.: #69480]	gram-positive	yes	84.828	no
[Ref.: #69480]	anaerobic	no	98.495	no
[Ref.: #69480]	halophile	no	87.219	no
[Ref.: #69480]	spore-forming	yes	94.577	no
[Ref.: #69480]	glucose-util	yes	92.284	no
[Ref.: #69480]	aerobic	yes	92.593	no
[Ref.: #69480]	flagellated	no	94.042	no
[Ref.: #69480]	thermophile	yes	98.078	no
[Ref.: #69480]	glucose-ferment	no	90.573	no

Availability in culture collections External links

[Ref.: #20866]

Culture collection no.

DSM 45914, CICC 10681

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Thermoactinomyces guangxiensis sp. nov., a thermophilic actinomycete isolated from mushroom compost.	Wu H, Liu B, Pan S	Int J Syst Evol Microbiol	10.1099/ijs.0.000342	2015	*
Genetics	Genome Sequence of Thermoactinomyces daqus H-18, a Novel Thermophilic Species Isolated from High-Temperature Daqu.	Yao S, Xu Y, Xin C, Xu L, Liu Y, Li H, Li J, Zhao J, Cheng C	Genome Announc	10.1128/genomeA.01394-14	2015	*
Phylogeny	Thermoactinomyces daqus sp. nov., a thermophilic bacterium isolated from high-temperature Daqu.	Yao S, Liu Y, Zhang M, Zhang X, Li H, Zhao T, Xin C, Xu L, Zhang B, Cheng C	Int J Syst Evol Microbiol	10.1099/ijs.0.055509-0	2013	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20866

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 45914

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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