Streptococcus constellatus subsp. viborgensis (DSM 25819, CCUG 62387, CIP 110789)

Name: Streptococcus constellatus subsp. viborgensis (DSM 25819, CCUG 62387, CIP 110789)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 24606

Type strain

Strain Designation SK1359

Culture col. no. DSM 25819 CCUG 62387 CIP 110789 SK1359

NCBI tax ID(s) 1272518

Special Collections DSMZ CCUG CIP Literature strains

History <- M. Kilian, Dept. of Biomedicine, Aarhus Univ., Denmark; SK1359 CIP <- 2014, DSMZ <- M. Kilian, Aarhus Univ., Aarhus, Denmark: strain SK1359

Links

Streptococcus constellatus subsp. viborgensis SK1359 is a microaerophile, Gram-positive, coccus-shaped bacterium that was isolated from human throat.

Gram-positive coccus-shaped microaerophile genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 397353

NCTC 13787,DSM 25819,CCUG 62387,CIP 110789

@ref 20215

Last LPSN update 2026-02-09 11:24:01

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Lactobacillales

Family Streptococcaceae

Genus Streptococcus

Species Streptococcus constellatus subsp. viborgensis

Full scientific name Streptococcus constellatus subsp. viborgensis Jensen et al. 2013

BacDive ID	Other strains from **Streptococcus constellatus subsp. viborgensis** (2)	Type strain
156518	S. constellatus subsp. viborgensis CCUG 62388
156519	S. constellatus subsp. viborgensis CCUG 62389

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Confidence
30730	positive	0.75 µm	0.75 µm	coccus-shaped
125438					93
125438	positive				91.807
118735	positive			coccus-shaped

Colony morphology

@ref	Type of hemolysis	Hemolysis ability	Incubation period
21036	beta	1	1-2 days

Pigmentation

30730

Productionno

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
36495	MEDIUM 45 - for Columbia agar with sheep blood		Distilled water make up to (1000.000 ml);Columbia agar (39.000 g);Sheepblood (100.000 ml)
21036	COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)	Medium recipe at MediaDive	Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base
21036	TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)	Medium recipe at MediaDive	Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water
118735	CIP Medium 45	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
21036	positive	growth	37
36495	positive	growth	37
62822	positive	growth	37

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
21036	microaerophile
30730	microaerophile
62822	microaerophile

Spore formation

30730

Spore formationno

Observation

30730

Observationaggregates in chains

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68381	40585 ChEBI	alpha-cyclodextrin	-	builds acid from	from API rID32STR
68381	29016 ChEBI	arginine	+	hydrolysis	from API rID32STR
68381	18333 ChEBI	D-arabitol	-	builds acid from	from API rID32STR
68381	16899 ChEBI	D-mannitol	-	builds acid from	from API rID32STR
68370	16899 ChEBI	D-mannitol	-	builds acid from	from API 20STR
68381	16988 ChEBI	D-ribose	-	builds acid from	from API rID32STR
68370	16988 ChEBI	D-ribose	-	builds acid from	from API 20STR
68370	17924 ChEBI	D-sorbitol	-	builds acid from	from API 20STR
68381	16443 ChEBI	D-tagatose	-	builds acid from	from API rID32STR
30730	4853 ChEBI	esculin	+	hydrolysis
30730	17234 ChEBI	glucose	+	carbon source
68381	28087 ChEBI	glycogen	-	builds acid from	from API rID32STR
68370	28087 ChEBI	glycogen	-	builds acid from	from API 20STR
68381	606565 ChEBI	hippurate	-	hydrolysis	from API rID32STR
68370	606565 ChEBI	hippurate	-	hydrolysis	from API 20STR
68370	15443 ChEBI	inulin	-	builds acid from	from API 20STR
68381	30849 ChEBI	L-arabinose	-	builds acid from	from API rID32STR
68370	30849 ChEBI	L-arabinose	-	builds acid from	from API 20STR
30730	17716 ChEBI	lactose	+	carbon source
68370	17716 ChEBI	lactose	+	builds acid from	from API 20STR
68381	17716 ChEBI	lactose	+	builds acid from	from API rID32STR
68381	17306 ChEBI	maltose	+	builds acid from	from API rID32STR
68381	6731 ChEBI	melezitose	-	builds acid from	from API rID32STR
68381	28053 ChEBI	melibiose	-	builds acid from	from API rID32STR
68381	320055 ChEBI	methyl beta-D-glucopyranoside	+	builds acid from	from API rID32STR
68381	27941 ChEBI	pullulan	+	builds acid from	from API rID32STR
68381	16634 ChEBI	raffinose	-	builds acid from	from API rID32STR
68370	16634 ChEBI	raffinose	-	builds acid from	from API 20STR
68381	30911 ChEBI	sorbitol	-	builds acid from	from API rID32STR
68370	28017 ChEBI	starch	+	builds acid from	from API 20STR
68381	17992 ChEBI	sucrose	+	builds acid from	from API rID32STR
68370	27082 ChEBI	trehalose	+	builds acid from	from API 20STR
68381	27082 ChEBI	trehalose	+	builds acid from	from API rID32STR
68381	16199 ChEBI	urea	-	hydrolysis	from API rID32STR

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68381	15688 ChEBI	acetoin		from API rID32STR
68370	15688 ChEBI	acetoin		from API 20STR

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test
68381	15688 ChEBI	acetoin	+	from API rID32STR
68370	15688 ChEBI	acetoin	+	from API 20STR

Enzymes

@ref	Value	Activity	Ec
68381	Alanyl-Phenylalanyl-Proline arylamidase	+		from API rID32STR
68381	alkaline phosphatase	+	3.1.3.1	from API rID32STR
68370	alkaline phosphatase	+	3.1.3.1	from API 20STR
68381	alpha-galactosidase	-	3.2.1.22	from API rID32STR
68370	alpha-galactosidase	-	3.2.1.22	from API 20STR
68381	arginine dihydrolase	+	3.5.3.6	from API rID32STR
68381	beta-galactosidase	-	3.2.1.23	from API rID32STR
68370	beta-galactosidase	-	3.2.1.23	from API 20STR
68381	beta-glucosidase	+	3.2.1.21	from API rID32STR
68381	beta-glucuronidase	-	3.2.1.31	from API rID32STR
68370	beta-glucuronidase	-	3.2.1.31	from API 20STR
68381	beta-mannosidase	-	3.2.1.25	from API rID32STR
21036	catalase	+	1.11.1.6
21036	cytochrome-c oxidase	-	1.9.3.1
68381	glycyl tryptophan arylamidase	-		from API rID32STR
68370	leucine arylamidase	+	3.4.11.1	from API 20STR
68381	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API rID32STR
68381	pyrrolidonyl arylamidase	-	3.4.19.3	from API rID32STR
68370	pyrrolidonyl arylamidase	-	3.4.19.3	from API 20STR
68381	urease	-	3.5.1.5	from API rID32STR

API 20STR

@ref	Acetoin production (Voges Proskauer test)VP	HIP	ESC	PYRA	alpha GAL	beta GUR	beta GAL	PAL	LAP	ADH	RIB	ARA	MAN	SOR	LAC	TRE	INU	RAF	AMD	GLYG	beta hemolysis presentbeta HEM
21036	+	-	+/-	-	-	-	-	+	+	+	-	-	-	-	+	+	-	-	+	-	not determinedn.d.
21036	+	-	+	-	-	-	-	+	+	-	-	-	-	-	+	+	-	-	+	-	not determinedn.d.

API rID32STR

@ref	ADH (Arg)	beta GLU	beta GAR	beta GUR	alpha GAL	PAL	RIB	MAN	SOR	LAC	TRE	RAF	SAC	LARA	DARL	Acid from alpha-cyclodextrinCDEX	Acetoin production (Voges Proskauer test)VP	Alanyl-Phenylalanyl-Proline arylamidaseAPPA	beta GAL	Pyrrolidonyl arylamidasePyrA	N-Acetyl-glucosaminidasebeta NAG	Glycyl-tryptophan arylamidaseGTA	HIP	GLYG	PUL	MAL	MEL	MLZ	Acidification of methyl beta-D-glucopyranosideMbeta DG	TAG	beta MAN	URE
21036	+	+	+	-	-	+	-	-	-	+	+	-	+	-	-	-	+	+	-	-	-	-	-	-	+	+	-	-	+	-	-	-
21036	+	+	-	-	-	+	-	-	-	+	+	-	+	-	-	-	+	+	-	-	-	-	-	-	+	+	-	-	+	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Human	-
#Host Body-Site	#Oral cavity and airways	#Throat

Isolation

@ref	Sample type	Sampling date	Geographic location	Country	Country ISO 3 Code	Continent
21036	human throat		Viborg	Denmark	DNK	Europe
62822	Human throat	2006	Viborg	Denmark	DNK	Europe
118735	Human, Throat		Viborg, Denmark	Denmark	DNK	Europe

Taxonmaps

69479

Global distribution of 16S sequence JN787160 (>99% sequence identity) for Streptococcus from Microbeatlas

Aquatic Samples	764
Soil Samples	275
Animal Samples	34119
Plant Samples	242
Total Samples	35400

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
21036	2	Risk group (German classification)
118735	2	Risk group (French classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	NCBI tax ID	Score
66792	ASM1612787v1 assembly for Streptococcus constellatus FDAARGOS_1015	complete	GCA_016127875	76860.27	76860	99.53

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
21036	Streptococcus constellatus subsp. viborgensis SK1359 16S ribosomal RNA gene, partial sequence	JN787160	1404		1249614

Genome-based predictions

Predictions

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Streptococcus constellatus strain FDAARGOS_1015 strain Not applicable
PATRIC: 76860.27

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	91.81	yes
125438	anaerobic	anaerobicⓘ	no	90.41	yes
125438	aerobic	aerobicⓘ	no	97.87	yes
125438	spore-forming	spore-formingⓘ	no	81.71	yes
125438	thermophilic	thermophileⓘ	no	96.44	yes
125438	flagellated	motile2+ⓘ	no	93.00	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Taxonomy of the Anginosus group of the genus Streptococcus and description of Streptococcus anginosus subsp. whileyi subsp. nov. and Streptococcus constellatus subsp. viborgensis subsp. nov.	Jensen A, Hoshino T, Kilian M	Int J Syst Evol Microbiol	10.1099/ijs.0.043232-0	2012

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#21036	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 25819
#27061	IJSEM 2506 2013 ( DOI 10.1099/ijs.0.043232-0 , PubMed 23223817 )
#30730	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27061
#36495	; Curators of the CIP;
#62822	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 62387
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#68370	Automatically annotated from API 20STR .
#68381	Automatically annotated from API rID32STR .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#118735	Collection of Institut Pasteur ; Curators of the CIP; CIP 110789
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Streptococcus constellatus subsp. viborgensis (DSM 25819, CCUG 62387, CIP 110789)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Pigmentation

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Observation

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

API 20STR

API rID32STR

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_016127875

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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