Name: Rheinheimera texasensis A62-14B
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 2456

Type strain:

Species: Rheinheimera texasensis

Strain Designation: A62-14B

Culture col. no.: DSM 17496, ATCC BAA 1235

Strain history: <- R. J. C. McLean, Dept. Biol., TX State Univ., San Marcos, USA; A62-14B <- M. B. Barnes, Tulane Natl. Primate Res. Center, Louisiana

NCBI tax ID(s): 1123055 (strain), 306205 (species)

Section

Rheinheimera texasensis A62-14B is an anaerobe, mesophilic, Gram-negative bacterium that was isolated from Spring Lake .

Gram-negative
motile
rod-shaped
anaerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	07-12-2022 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Chromatiales*
	Family	*Chromatiaceae*
	Genus	*Rheinheimera*
	Species	**Rheinheimera texasensis**
	Full Scientific Name (PNU)	Rheinheimera texasensis Merchant et al. 2007

Synonym

"Pararheinheimera texasensis"

Information on morphological and physiological properties Morphology

[Ref.: #32153]	Gram stain	negative
[Ref.: #32153]	Cell length	1.85 µm
[Ref.: #32153]	Cell width	0.75 µm
[Ref.: #32153]	Cell shape	rod-shaped
[Ref.: #32153]	Motility	yes

[Ref.: #32153]

Pigment production

Information on culture and growth conditions Culture and growth conditions

[Ref.: #7023]

Culture medium

R2A MEDIUM (DSMZ Medium 830)

[Ref.: #7023]

Culture medium growth

[Ref.: #7023]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #7023]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #7023]	growth	30 °C
[Ref.: #32153]	growth	25-37 °C
[Ref.: #32153]	optimum	33.5 °C

[Ref.: #7023]	Temperature range	mesophilic
[Ref.: #32153]	Temperature range	mesophilic

	pH	Kind of pH		pH	pH range
[Ref.: #32153]			optimum	7.75
[Ref.: #32153]			growth	6.5-9.6	alkaliphile

Information on physiology and metabolism Physiology and metabolism

[Ref.: #32153]

Oxygen tolerance

anaerobe

[Ref.: #32153]

Ability of spore formation

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #32153]		NaCl		growth	0-1	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #32153]	arabinose ChEBI	+	carbon source
[Ref.: #32153]	cellobiose ChEBI	+	carbon source
[Ref.: #32153]	galactose ChEBI	+	carbon source
[Ref.: #32153]	glucose ChEBI	+	carbon source
[Ref.: #32153]	glycogen ChEBI	+	carbon source
[Ref.: #32153]	lactose ChEBI	+	carbon source
[Ref.: #32153]	methyl pyruvate ChEBI	+	carbon source
[Ref.: #32153]	N-acetylglucosamine ChEBI	+	carbon source
[Ref.: #32153]	nitrate ChEBI	+	reduction
[Ref.: #32153]	sucrose ChEBI	+	carbon source
[Ref.: #32153]	trehalose ChEBI	+	carbon source
[Ref.: #32153]	tween 20 ChEBI	+	carbon source
[Ref.: #32153]	tween 40 ChEBI	+	carbon source
[Ref.: #32153]	tween 80 ChEBI	+	carbon source
	Only first 10 entries are displayed. Click here to see all.

	Enzyme	Enzyme activity	EC number
[Ref.: #32153]	catalase	+	1.11.1.6
[Ref.: #32153]	cytochrome oxidase	+	1.9.3.1
[Ref.: #32153]	gelatinase	+

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #7023]	Sample type/isolated from	Spring Lake (freshwater lake)
[Ref.: #7023]	Geographic location (country and/or sea, region)	Texas, San Marcos
[Ref.: #7023]	Country	USA
[Ref.: #7023]	Country ISO 3 Code	USA
[Ref.: #7023]	Continent	North America
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Freshwater
#Environmental	#Aquatic	#Lake (large)
#Environmental	#Aquatic	#Spring

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #7023]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #7023]	Rheinheimera texasensis strain A62-14B 16S ribosomal RNA gene, complete sequence	AY701891	1447	ENA	306205 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Pararheinheimera texasensis DSM 17496 DSM 17496	GCA_000711985	scaffold	GenBank	1123055 tax ID	*
[Ref.: #66792]	Rheinheimera texasensis DSM 17496	1123055.3	wgs	PATRIC	1123055 tax ID	*
[Ref.: #66792]	Pararheinheimera texasensis DSM 17496	2565956515	draft	JGI IMG/M	1123055 tax ID	*
[Ref.: #66792]	Staphylococcus aureus st1659	GCA_900041815	contig	PATRIC	1280 tax ID	*

[Ref.: #7023]

GC-content

48.2 mol%

Availability in culture collections External links

[Ref.: #7023]

Culture collection no.

DSM 17496, ATCC BAA 1235

[Ref.: #20218]

Associated Passport(s) in StrainInfo

740423, 740422

Literature:

Only first 10 entries are displayed. Click here to see all.

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Rheinheimera texasensis sp. nov., a halointolerant freshwater oligotroph.	Merchant MM, Welsh AK, McLean RJC	Int J Syst Evol Microbiol	10.1099/ijs.0.65045-0	2007	*
Phylogeny	Rheinheimera tangshanensis sp. nov., a rice root-associated bacterium.	Zhang X, Sun L, Qiu F, McLean RJ, Jiang R, Song W	Int J Syst Evol Microbiol	10.1099/ijs.0.65605-0	2008	*
Phylogeny	Rheinheimera aquatica sp. nov., an antimicrobial activity producing bacterium isolated from freshwater culture pond.	Chen WM, Lin CY, Young CC, Sheu SY	J Microbiol Biotechnol	10.4014/jmb.1004.04048	2010	*
Phylogeny	Taxonomic description and genome sequence of Rheinheimera mesophila sp. nov., isolated from an industrial waste site.	Kumar A, Bajaj A, Mathan Kumar R, Kaur G, Kaur N, Kumar Singh N, Manickam N, Mayilraj S	Int J Syst Evol Microbiol	10.1099/ijsem.0.000471	2015	*
Phylogeny	Rheinheimera coerulea sp. nov., isolated from a freshwater creek, and emended description of genus Rheinheimera Brettar et al. 2002.	Sheu SY, Chen WT, Young CC, Chen WM	Int J Syst Evol Microbiol	10.1099/ijsem.0.002838	2018	*
Phylogeny	Rheinheimera sediminis sp. nov., a marine bacterium isolated from coastal sediment.	Yu Q, Qi Y, Zhang H, Pu J	Int J Syst Evol Microbiol	10.1099/ijsem.0.003917	2020	*

References

#7023

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 17496

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#32153

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #28396 (see below)

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#28396

IJSEM 2376 2007 ( DOI 10.1099/ijs.0.65045-0 , PubMed 17911314 )

* These data were automatically processed and therefore are not curated

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