Name: Aeromonas schubertii 2446-81
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 245

Type strain:

Species: Aeromonas schubertii

Strain Designation: 2446-81

Culture col. no.: DSM 4882, ATCC 43700, CDC 2446-81, CCUG 27820, JCM 7373, LMG 9074, CCM 4356, CECT 4240, CIP 103437, NCIMB 13161

Strain history: CIP <- 1990, ATCC <- F. Hickman-Brenner, CDC: strain 2446-81 <- Texas Hlth. Dept., Texas, USA

NCBI tax ID(s): 652 (species)

SI-ID 389

LMG 9074, ATCC 43700, CCM 4356, JCM 7373, CCUG 27820, CIP 103437, DSM 4882, NCIMB 13161, CECT 4240, CCRC 14138, CECT 4241, BCRC 14138, CNCTC 5720

Special Collections

Other strains from Aeromonas schubertii

Section

Aeromonas schubertii 2446-81 is a bacterium that was isolated from forehead abscess.

16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Aeromonadales*
	Family	*Aeromonadaceae*
	Genus	*Aeromonas*
	Species	**Aeromonas schubertii**
	Full Scientific Name (LPSN)	Aeromonas schubertii Hickman-Brenner et al. 1989

Information on culture and growth conditions Culture and growth conditions

[Ref.: #34262]

Culture medium

MEDIUM 72- for trypto casein soja agar

[Ref.: #34262]

Culture medium growth

[Ref.: #34262]

Culture medium composition

expand / minimize

[Ref.: #1863]

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

[Ref.: #1863]

Culture medium growth

[Ref.: #1863]

Culture medium link

Medium recipe at MediaDive

[Ref.: #1863]

Culture medium composition

expand / minimize

[Ref.: #1863]

Culture medium

TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)

[Ref.: #1863]

Culture medium growth

[Ref.: #1863]

Culture medium link

Medium recipe at MediaDive

[Ref.: #1863]

Culture medium composition

expand / minimize

[Ref.: #122515]

Culture medium

CIP Medium 72

[Ref.: #122515]

Culture medium growth

[Ref.: #122515]

Culture medium link

Medium recipe provided by DSMZ

		Temperature
[Ref.: #1863]	growth	30 °C
[Ref.: #34262]	growth	22 °C
[Ref.: #48965]	growth	30 °C
[Ref.: #67770]	growth	37 °C

Information on physiology and metabolism Physiology and metabolism

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68368]	amygdalin ChEBI	-	fermentation	* from API 20E
[Ref.: #68368]	arginine ChEBI	+	hydrolysis	* from API 20E
[Ref.: #68368]	citrate ChEBI	+	assimilation	* from API 20E
[Ref.: #68368]	D-glucose ChEBI	+	fermentation	* from API 20E
[Ref.: #68368]	D-mannitol ChEBI	-	fermentation	* from API 20E
[Ref.: #68368]	gelatin ChEBI	+	hydrolysis	* from API 20E
[Ref.: #68368]	L-arabinose ChEBI	-	fermentation	* from API 20E
[Ref.: #68368]	L-rhamnose ChEBI	-	fermentation	* from API 20E
[Ref.: #68368]	melibiose ChEBI	-	fermentation	* from API 20E
[Ref.: #68368]	myo-inositol ChEBI	-	fermentation	* from API 20E
[Ref.: #68368]	ornithine ChEBI	-	degradation	* from API 20E
[Ref.: #68368]	sorbitol ChEBI	-	fermentation	* from API 20E
[Ref.: #68368]	sucrose ChEBI	-	fermentation	* from API 20E
[Ref.: #68368]	tryptophan ChEBI	-	energy source	* from API 20E
[Ref.: #68368]	urea ChEBI	-	hydrolysis	* from API 20E
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Production
[Ref.: #68368]	acetoin ChEBI	yes	* from API 20E
[Ref.: #68368]	hydrogen sulfide ChEBI	no	* from API 20E
[Ref.: #68368]	indole ChEBI	no	* from API 20E

	Physiological tests	Metabolite	Voges-Proskauer-test	Indole test
[Ref.: #68368]		acetoin ChEBI	+		* from API 20E
[Ref.: #68368]		indole ChEBI		-	* from API 20E

	Enzyme	Enzyme activity	EC number
[Ref.: #68368]	arginine dihydrolase	+	3.5.3.6	* from API 20E
[Ref.: #68368]	beta-galactosidase	+	3.2.1.23	* from API 20E
[Ref.: #68368]	cytochrome oxidase	+	1.9.3.1	* from API 20E
[Ref.: #68368]	gelatinase	+		* from API 20E
[Ref.: #68368]	ornithine decarboxylase	-	4.1.1.17	* from API 20E
[Ref.: #68368]	tryptophan deaminase	-	4.1.99.1	* from API 20E
[Ref.: #68368]	urease	-	3.5.1.5	* from API 20E

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #48965]

Fatty acid	Percentage	ECL
C16:1 ω7c	29.6	15.819
C12:0	9	12
C16:0	8.4	16
C14:0 3OH/C16:1 ISO I	6.2	15.485
C18:1 ω7c /12t/9t	5.8	17.824
C15:0	4.7	15
C14:0	4.4	14
C16:1 ω7c alcohol	2.6	15.386
C17:1 ω9c ISO	2.5	16.416
C13:0 iso	2.4	12.612
C18:2 ω6,9c/C18:0 ANTE	2.4	17.724
C13:0	2.2	13
C17:1 ω8c	2.2	16.792
C17:0 10-methyl	2.1	17.41
C15:0 ISO	2.1	14.621
C15:0 ISO 3OH	1.8	16.135
C16:0 N alcohol	1.7	15.549
C13:0 ISO 2OH	1.3	13.814
C15:1 ω8c	1.3	14.792
C13:0 3OH/C15:1 i I/H	1.2	14.469
C15:1 ISO F	0.9	14.414
Unidentified	0.8	17.321
C17:1 ω6c	0.8	16.862
C17:0	0.7	17
C17:0 iso	0.7	16.629
C15:1 ω6c	0.5	14.856
C15:0 3OH	0.5	16.504
C16:0 anteiso	0.4	15.717
C11:0	0.4	11
Unidentified	0.4	13.934

Metadata FA analysis

Reference

[Ref.: #48965]

Fatty acid	Percentage	ECL
C16:1 ω7c	39.3	15.819
C16:0	14.2	16
C18:1 ω7c /12t/9t	12.4	17.824
C12:0	9.2	12
C14:0 3OH/C16:1 ISO I	8.7	15.485
C14:0	3.8	14
C17:1 ω9c ISO	1.7	16.416
C15:0	1.6	15
C17:1 ω8c	1.3	16.792
C13:0 ISO 2OH	1.1	13.814
Unidentified	0.9	12.274
C17:0 iso	0.8	16.629
C15:0 ISO 3OH	0.8	16.135
C13:0 iso	0.8	12.612
unknown 14.503	0.8	14.503
C17:0	0.7	17
C13:0	0.7	13
C17:1 ω6c	0.6	16.862
C15:0 ISO	0.6	14.621

API® 20E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	beta-GalactosidaseONPG	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Ornithine decarboxylaseODC	Citrate utilizationCIT	H2S productionH2S	Urease/urea hydrolysisURE	Tryptophan deaminaseTDA (Trp)	Indole productionIND	Acetoin production (Voges Proskauer test)VP	Gelatinase/gelatin hydrolysisGEL	Fermentation/oxidation of D-glucoseGLU	Fermentation/oxidation of D-mannitolMAN	Fermentation/oxidation of inositolINO	Fermentation/oxidation of sorbitolSor	Fermentation/oxidation of L-rhamnoseRHA	Fermentation/oxidation of sucroseSAC	Fermentation/oxidation of melibioseMEL	Fermentation/oxidation of amygdalinAMY	Fermentation/oxidation of L-arabinoseARA	Cytochrome oxidaseOX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	Oxidative catabolisation of D-glucoseOF-O	Fermentation of D-glucoseOF-F
[Ref.: #1863]	17946	+	+	-	-	+	-	-	-	-	+	+	+	-	-	-	-	-	-	-	-	+	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.
[Ref.: #1863]	16788	+	+	+	-	+	-	-	-	-	+	+	+	-	-	-	-	-	-	-	-	+	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #1863]	Sample type/isolated from	forehead abscess
[Ref.: #1863]	Geographic location (country and/or sea, region)	Texas
[Ref.: #1863]	Country	USA
[Ref.: #1863]	Country ISO 3 Code	USA
[Ref.: #1863]	Continent	North America

[Ref.: #48965]	Sample type/isolated from	Human abscess,forehead
[Ref.: #48965]	Geographic location (country and/or sea, region)	Texas
[Ref.: #48965]	Country	USA
[Ref.: #48965]	Country ISO 3 Code	USA
[Ref.: #48965]	Continent	North America

[Ref.: #67770]	Sample type/isolated from	Forehead abscess

[Ref.: #122515]	Sample type/isolated from	Human, Abscess
[Ref.: #122515]	Geographic location (country and/or sea, region)	Texas
[Ref.: #122515]	Country	United States of America
[Ref.: #122515]	Country ISO 3 Code	USA
[Ref.: #122515]	Continent	North America
[Ref.: #122515]	Isolation date	1981
* marker position based on {}

Isolation sources categories

#Host Body-Site

#Other

#Abscess

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #1863]	Biosafety level	2	Risk group (German classification) According to TRBA 466
[Ref.: #122515]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #1863]	Aeromonas schubertii 16S rRNA gene, strain ATCC 43700	X60416	1503	GenBank ENA	652 tax ID
[Ref.: #20218]	Aeromonas schubertii strain CECT 4240 16S ribosomal RNA gene, partial sequence	JX014452	151	GenBank ENA	652 tax ID	*
[Ref.: #20218]	A.shubertii (ATCC 43700T) gene for 16S ribosomal RNA	X74682	1460	GenBank ENA	652 tax ID	*

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Aeromonas schubertii CECT 4240	GCA_000820105	scaffold	GenBank ENA	652 tax ID
[Ref.: #67770]	Aeromonas schubertii ATCC 43700	GCA_001481395	scaffold	GenBank ENA	652 tax ID
[Ref.: #66792]	Aeromonas schubertii CECT 4240	652.4	wgs	PATRIC	652 tax ID	*
[Ref.: #66792]	Aeromonas schubertii strain ATCC 43700	652.6	wgs	PATRIC	652 tax ID	*
[Ref.: #66792]	Aeromonas schubertii CECT 4240	2639763128	draft	JGI IMG/M	652 tax ID	*
[Ref.: #66792]	Aeromonas schubertii ATCC 43700	2700989550	complete	JGI IMG/M	652 tax ID	*

Availability in culture collections External links

[Ref.: #1863]

Culture collection no.

DSM 4882, ATCC 43700, CDC 2446-81, CCUG 27820, JCM 7373, LMG 9074, CCM 4356, CECT 4240, CIP 103437, NCIMB 13161

[Ref.: #69927]

SI-ID 389

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Aeromonas schubertii, a novel bacterium recovered from AHPND affected farm is lethal to whiteleg shrimp, Penaeus vannamei.	Sangpo P, Thitamadee S, Dong HT, Senapin S	Microb Pathog	10.1016/j.micpath.2020.104501	2020	*
Genetics	Complete Genome Sequence of the Type Strain of Aeromonas schubertii, ATCC 43700.	Liu L, Li N, Zhang D, Fu X, Shi C, Lin Q	Genome Announc	10.1128/genomeA.00012-16	2016	*
Pathogenicity	Characterization of Aeromonas schubertii strains recently isolated from traumatic wound infections.	Carnahan AM, Marii MA, Fanning GR, Pass MA, Joseph SW	J Clin Microbiol	10.1128/jcm.27.8.1826-1830.1989	1989	*
Phylogeny	Aeromonas schubertii, a new mannitol-negative species found in human clinical specimens.	Hickman-Brenner FW, Fanning GR, Arduino MJ, Brenner DJ, Farmer JJ 3rd	J Clin Microbiol	10.1128/jcm.26.8.1561-1564.1988	1988	*

References

#1863

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 4882

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#34262 ; Curators of the CIP;
#48965 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 27820

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68368

Automatically annotated from API 20E .

#69927

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID389.1 )

#122515 Collection of Institut Pasteur ; Curators of the CIP; CIP 103437
* These data were automatically processed and therefore are not curated

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