Halosaccharopolyspora lacisalsi (DSM 45975, CCTCC AA 2010012, KCTC 19987)

Name: Halosaccharopolyspora lacisalsi (DSM 45975, CCTCC AA 2010012, KCTC 19987)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 24452

Type strain

Culture col. no. DSM 45975 CCTCC AA 2010012 KCTC 19987 TRM 40133

NCBI tax ID(s) 1000566

Special Collections DSMZ KCTC

History <- J. S. Lee, KRIBB; KCTC 19987 <- TW Guan, Tarim Univ., China

Links

Halosaccharopolyspora lacisalsi DSM 45975 is an aerobe, Gram-positive bacterium that was isolated from hypersaline habitat.

Gram-positive aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 398203

DSM 45975

@ref 20215

Last LPSN update 2026-02-09 11:23:58

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Pseudonocardiales

Family Pseudonocardiaceae

Genus Halosaccharopolyspora

Species Halosaccharopolyspora lacisalsi

Full scientific name Halosaccharopolyspora lacisalsi (Guan et al. 2013) Teo et al. 2021

Synonyms (1)

Saccharopolyspora lacisalsi

Morphology

Cell morphology

@ref	Gram stain	Confidence
67771	positive
125439	positive	99
125438		92

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
20795	STARCH-MINERAL SALT-AGAR (STMS) + 15% NACL (DSMZ Medium 1241)		Medium recipe at MediaDive	Name: STARCH - MINERAL SALT - AGAR (STMS) + 15% NaCl (DSMZ Medium 1241) Composition: NaCl 150.0 g/l Agar 15.0 g/l Starch 10.0 g/l (NH4)2SO4 2.0 g/l CaCO3 2.0 g/l K2HPO4 1.0 g/l MgSO4 x 7 H2O 1.0 g/l FeSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l ZnSO4 x 7 H2O 0.001 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
20795	positive	growth	37
67771	positive	growth	37

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
67771	aerobe
125439	obligate aerobe	97.8

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2
#Condition	#Saline

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
20795	hypersaline habitat	Xinjiang Province, Lop Nur salt lake	China	CHN	Asia
67771	From saline soil		China	CHN	Asia

Taxonmaps

69479

Global distribution of 16S sequence JF411070 (>99% sequence identity) for Saccharopolyspora lacisalsi subclade from Microbeatlas

Aquatic Samples	134
Soil Samples	317
Animal Samples	209
Plant Samples	58
Total Samples	718

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
20795	1	Risk group (German classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM1413797v1 assembly for Halosaccharopolyspora lacisalsi DSM 45975	contig	GCA_014137975	1000566.3	2820988766	1000566	73.1

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20795	Saccharopolyspora lacisalsi strain TRM 40133 16S ribosomal RNA gene, partial sequence	JF411070	1420		1000566

GC content

20795

GC-content (mol%)68.2

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Halosaccharopolyspora lacisalsi DSM 45975
NCBI: GCA_014137975

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	yes	58.90	no
125439	motility	BacteriaNetⓘ	no	85.20	no
125439	gram_stain	BacteriaNetⓘ	positive	99.00	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	97.80	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Saccharopolyspora lacisalsi strain DSM 45975
PATRIC: 1000566.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	89.10	yes
125438	anaerobic	anaerobicⓘ	no	93.87	yes
125438	spore-forming	spore-formingⓘ	yes	82.41	no
125438	aerobic	aerobicⓘ	yes	88.19	yes
125438	thermophilic	thermophileⓘ	no	92.56	yes
125438	flagellated	motile2+ⓘ	no	92.00	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Taxonomic note on the family Pseudonocardiaceae based on phylogenomic analysis and descriptions of Allosaccharopolyspora gen. nov. and Halosaccharopolyspora gen. nov.	Teo WFA, Tan GYA, Li WJ.	Int J Syst Evol Microbiol	10.1099/ijsem.0.005075	2021

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20795	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 45975
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67771	Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Halosaccharopolyspora lacisalsi (DSM 45975, CCTCC AA 2010012, KCTC 19987)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_014137975

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

Help

Social Media