Name: Falsiporphyromonas endometrii 9_9A1
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 24339

Type strain:

Species: Falsiporphyromonas endometrii

Strain Designation: 9_9A1

Culture col. no.: DSM 27210, CCUG 64267, LMM 40

Strain history: <- K. Wagener, Veterinärmed. Univ., Inst. Bacteriology, Mycology and Hygiene, Vienna, Austria

NCBI tax ID(s): 1387297 (species)

SI-ID 406050

DSM 27210, CCUG 64267

Section

Falsiporphyromonas endometrii 9_9A1 is an anaerobe, mesophilic animal pathogen that was isolated from bovine post-partum endometrium of a Holstein cow.

anaerobe
animal pathogen
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Bacteroidia*
	Order	*Bacteroidales*
	Family	*Porphyromonadaceae*
	Genus	*Falsiporphyromonas*
	Species	**Falsiporphyromonas endometrii**
	Full Scientific Name (LPSN)	Falsiporphyromonas endometrii Wagener et al. 2014

Information on morphological and physiological properties Morphology

[Ref.: #21307]	Incubation period	1-2 days

[Ref.: #63112]	Incubation period	1 day

Information on culture and growth conditions Culture and growth conditions

[Ref.: #21307]

Culture medium

CHOPPED MEAT MEDIUM (DSMZ Medium 78)

[Ref.: #21307]

Culture medium growth

[Ref.: #21307]

Culture medium link

Medium recipe at MediaDive

[Ref.: #21307]

Culture medium composition

expand / minimize

[Ref.: #21307]

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

[Ref.: #21307]

Culture medium growth

[Ref.: #21307]

Culture medium link

Medium recipe at MediaDive

[Ref.: #21307]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #21307]			growth	37 °C
[Ref.: #63112]			growth	37 °C

[Ref.: #21307]	Temperature range	mesophilic
[Ref.: #63112]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #21307]	Oxygen tolerance	anaerobe
[Ref.: #63112]	Oxygen tolerance	anaerobe

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68380]	arginine ChEBI	-	hydrolysis	* from API rID32A
[Ref.: #68380]	D-mannose ChEBI	-	fermentation	* from API rID32A
[Ref.: #68380]	L-glutamate ChEBI	-	degradation	* from API rID32A
[Ref.: #68380]	nitrate ChEBI	-	reduction	* from API rID32A
[Ref.: #68380]	raffinose ChEBI	-	fermentation	* from API rID32A
[Ref.: #68380]	tryptophan ChEBI	-	energy source	* from API rID32A
[Ref.: #68380]	urea ChEBI	-	hydrolysis	* from API rID32A

	Metabolite production	Metabolite	Production
[Ref.: #68380]		indole ChEBI	no	* from API rID32A

	Physiological tests	Metabolite	Indole test
[Ref.: #68380]		indole ChEBI	-	* from API rID32A

	Enzyme	Enzyme activity	EC number
[Ref.: #68380]	alanine arylamidase	+	3.4.11.2	* from API rID32A
[Ref.: #68380]	alkaline phosphatase	+	3.1.3.1	* from API rID32A
[Ref.: #68380]	alpha-arabinosidase	-	3.2.1.55	* from API rID32A
[Ref.: #68380]	alpha-fucosidase	-	3.2.1.51	* from API rID32A
[Ref.: #68380]	alpha-galactosidase	-	3.2.1.22	* from API rID32A
[Ref.: #68380]	alpha-glucosidase	-	3.2.1.20	* from API rID32A
[Ref.: #68380]	arginine dihydrolase	-	3.5.3.6	* from API rID32A
[Ref.: #68380]	beta-galactosidase	-	3.2.1.23	* from API rID32A
[Ref.: #68380]	beta-Galactosidase 6-phosphate	-		* from API rID32A
[Ref.: #68380]	beta-glucosidase	-	3.2.1.21	* from API rID32A
[Ref.: #68380]	beta-glucuronidase	-	3.2.1.31	* from API rID32A
[Ref.: #68380]	glutamate decarboxylase	-	4.1.1.15	* from API rID32A
[Ref.: #68380]	glutamyl-glutamate arylamidase	+		* from API rID32A
[Ref.: #68380]	glycin arylamidase	+		* from API rID32A
[Ref.: #68380]	histidine arylamidase	-		* from API rID32A
[Ref.: #68380]	L-arginine arylamidase	-		* from API rID32A
[Ref.: #68380]	leucine arylamidase	-	3.4.11.1	* from API rID32A
[Ref.: #68380]	leucyl glycin arylamidase	+	3.4.11.1	* from API rID32A
[Ref.: #68380]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API rID32A
[Ref.: #68380]	phenylalanine arylamidase	-		* from API rID32A
[Ref.: #68380]	proline-arylamidase	-	3.4.11.5	* from API rID32A
[Ref.: #68380]	pyrrolidonyl arylamidase	-	3.4.19.3	* from API rID32A
[Ref.: #68380]	serine arylamidase	-		* from API rID32A
[Ref.: #68380]	tryptophan deaminase	-	4.1.99.1	* from API rID32A
[Ref.: #68380]	tyrosine arylamidase	-		* from API rID32A
[Ref.: #68380]	urease	-	3.5.1.5	* from API rID32A
	Only first 10 entries are displayed. Click here to see all.

API® rID32A:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Urease/urea hydrolysisURE	Arginine dihydrolaseADH (Arg)	alpha-Galactosidasealpha GAL	beta-Galactosidasebeta GAL	beta-Galactosidase 6-phosphatebeta GP	alpha-Glucosidasealpha GLU	beta-Glucosidasebeta GLU	alpha-Arabinosidasealpha ARA	beta-Glucuronidasebeta GUR	beta-N-Acetyl-beta-glucosaminidasebeta NAG	Fermentation of D-mannoseMNE	Fermentation of raffinoseRAF	Glutamate decarboxylaseGDC	alpha-Fucosidasealpha FUC	Reduction of nitrateNIT	Indole productionIND	Alkaline phosphatasePAL	L-arginine arylamidaseArgA	Proline arylamidaseProA	Leucyl glycin arylamidaseLGA	Phenylalanine arylamidasePheA	Leucine arylamidaseLeuA	Pyrrolidonyl arylamidasePyrA	Tyrosine arylamidaseTyrA	Alanine arylamidaseAlaA	Glycin arylamidaseGlyA	Histidine arylamidaseHisA	Glutamyl-glutamate arylamidaseGGA	Serine arylamidaseSerA
[Ref.: #21307]	12463	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	+	-	-	-	-	+	+	-	+	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #21307]	Sample type/isolated from	bovine post-partum endometrium of a Holstein cow
[Ref.: #21307]	Geographic location (country and/or sea, region)	Klein Bennebek, Friedrichsanbau
[Ref.: #21307]	Country	Germany
[Ref.: #21307]	Country ISO 3 Code	DEU
[Ref.: #21307]	Continent	Europe

[Ref.: #63112]	Sample type/isolated from	Bovine uterus
[Ref.: #63112]	Sampling date	2010-08-21
* marker position based on {}

Isolation sources categories

#Host	#Mammals	#Bovinae (Cow, Cattle)
#Host Body-Site	#Urogenital tract	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence HF969314 (>99% sequence identity) for Falsiporphyromonas endometrii subclade from Microbeatlas

Aquatic Samples	195
Soil Samples	78
Animal Samples	1671
Plant Samples	14
Total Samples	1958

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #21307]	Pathogenicity (animal)	yes, in single cases
[Ref.: #21307]	Biosafety level	1	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #21307]	Falsiporphyromonas endometrii partial 16S rRNA gene, isolate LMM 40	HF969314	1459	ENA	1387297 tax ID

[Ref.: #21307]

GC-content

40.7 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #21307]

Culture collection no.

DSM 27210, CCUG 64267, LMM 40

[Ref.: #88265]

SI-ID 406050

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Falsiporphyromonas endometrii gen. nov., sp. nov., isolated from the post-partum bovine uterus, and emended description of the genus Porphyromonas Shah and Collins 1988.	Wagener K, Drillich M, Baumgardt S, Kampfer P, Busse HJ, Ehling-Schulz M	Int J Syst Evol Microbiol	10.1099/ijs.0.057307-0	2013	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#21307

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 27210

#63112 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 64267

#68380

Automatically annotated from API rID32A .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#88265

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID406050.1 )

* These data were automatically processed and therefore are not curated

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