Name: Paenibacillus chartarius DSM 28439
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 24285

Type strain:

Species: Paenibacillus chartarius

Culture col. no.: DSM 28439, CCM 7759, CCUG 55240, JCM 30496

Strain history: CCM 7759 <-- CCUG 55240 <-- L. Makhoul; Stora Enso, Sweden; 158-11.

NCBI tax ID(s): 747481 (species)

SI-ID 396971

DSM 28439, CCUG 55240

Other strains from Paenibacillus chartarius

P. chartarius SF000284(FSU),
P. chartarius SF000315(FSU),
P. chartarius SF000796(FSU),

Section

Paenibacillus chartarius DSM 28439 is an aerobe, spore-forming, mesophilic bacterium that was isolated from industry, papermill.

Gram-positive
rod-shaped
spore-forming
aerobe
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Paenibacillaceae*
	Genus	*Paenibacillus*
	Species	**Paenibacillus chartarius**
	Full Scientific Name (LPSN)	Paenibacillus chartarius Kämpfer et al. 2012

Information on morphological and physiological properties Morphology

[Ref.: #30400]	Gram stain	positive

[Ref.: #30400]	Cell length	2.5 µm

[Ref.: #30400]	Cell width	0.9 µm

[Ref.: #30400]	Cell shape	rod-shaped

[Ref.: #30400]	Motility	no

[Ref.: #30400]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

[Ref.: #20709]

Culture medium

CASO AGAR (MERCK 105458) (DSMZ Medium 220)

[Ref.: #20709]

Culture medium growth

[Ref.: #20709]

Culture medium link

Medium recipe at MediaDive

[Ref.: #20709]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #20709]	growth	30 °C
[Ref.: #30400]	growth	15-45 °C
[Ref.: #30400]	optimum	30 °C
[Ref.: #60508]	growth	37 °C
[Ref.: #67770]	growth	28 °C

[Ref.: #20709]	Temperature range	mesophilic
[Ref.: #30400]	Temperature range	mesophilic
[Ref.: #60508]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #30400]			optimum	6.5
[Ref.: #30400]			growth	5.5-7.5

Information on physiology and metabolism Physiology and metabolism

[Ref.: #30400]	Oxygen tolerance	aerobe
[Ref.: #60508]	Oxygen tolerance	aerobe

[Ref.: #30400]

Ability of spore formation

yes

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #30400]		NaCl		growth	1-3	%

[Ref.: #67770]

Observation

quinones: MK-7

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #30400]	cellobiose ChEBI	+	carbon source
[Ref.: #30400]	fructose ChEBI	+	carbon source
[Ref.: #30400]	galactose ChEBI	+	carbon source
[Ref.: #30400]	gluconate ChEBI	+	carbon source
[Ref.: #30400]	glucose ChEBI	+	carbon source
[Ref.: #30400]	maltose ChEBI	+	carbon source
[Ref.: #30400]	mannitol ChEBI	+	carbon source
[Ref.: #30400]	mannose ChEBI	+	carbon source
[Ref.: #30400]	rhamnose ChEBI	+	carbon source
[Ref.: #30400]	salicin ChEBI	+	carbon source
[Ref.: #30400]	sucrose ChEBI	+	carbon source
[Ref.: #30400]	trehalose ChEBI	+	carbon source
[Ref.: #30400]	xylose ChEBI	+	carbon source
	Only first 10 entries are displayed. Click here to see all.

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #30400]		cytochrome oxidase	+	1.9.3.1
[Ref.: #30400]		gelatinase	+

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #20709]	Sample type/isolated from	industry, papermill
[Ref.: #20709]	Geographic location (country and/or sea, region)	Karlstad
[Ref.: #20709]	Country	Sweden
[Ref.: #20709]	Country ISO 3 Code	SWE
[Ref.: #20709]	Continent	Europe

[Ref.: #60508]	Sample type/isolated from	Papermill,industry
[Ref.: #60508]	Sampling date	2007-09-01
[Ref.: #60508]	Geographic location (country and/or sea, region)	Karlstad
[Ref.: #60508]	Country	Sweden
[Ref.: #60508]	Country ISO 3 Code	SWE
[Ref.: #60508]	Continent	Europe

[Ref.: #67770]	Sample type/isolated from	Industrial paper mill
[Ref.: #67770]	Country	Sweden
[Ref.: #67770]	Country ISO 3 Code	SWE
[Ref.: #67770]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Engineered

#Industrial

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence FN689718 (>99% sequence identity) for Paenibacillus chartarius subclade from Microbeatlas

Aquatic Samples	38
Soil Samples	362
Animal Samples	21
Plant Samples	21
Total Samples	442

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #20709]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20709]	Paenibacillus chartarius partial 16S rRNA gene, strain CCUG 55240	FN689718	1407	ENA	747481 tax ID

[Ref.: #20709]

GC-content

53.9 mol%

Availability in culture collections External links

[Ref.: #20709]

Culture collection no.

DSM 28439, CCM 7759, CCUG 55240, JCM 30496

[Ref.: #88223]

SI-ID 396971

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Paenibacillus chartarius sp. nov., isolated from a paper mill.	Kampfer P, Falsen E, Lodders N, Martin K, Kassmannhuber J, Busse HJ	Int J Syst Evol Microbiol	10.1099/ijs.0.035154-0	2011	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20709

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 28439

#30400

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26737 (see below)

#60508 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 55240
#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#88223

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID396971.1 )

#26737

IJSEM 1342 2012 ( DOI 10.1099/ijs.0.035154-0 , PubMed 21828020 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Paenibacillus chartarius in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF