Paenibacillus chartarius (DSM 28439, CCM 7759, CCUG 55240)

Name: Paenibacillus chartarius (DSM 28439, CCM 7759, CCUG 55240)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 24285

Type strain

Culture col. no. DSM 28439 CCM 7759 CCUG 55240 JCM 30496

NCBI tax ID(s) 747481

Special Collections DSMZ CCUG JCM Literature strains

History <- CCUG; CCUG 55240 <- P. Kämpfer, Justus-Liebig-Universität, Giessen, Germany CCM 7759 <-- CCUG 55240 <-- L. Makhoul; Stora Enso, Sweden; 158-11.

Links

Paenibacillus chartarius DSM 28439 is an aerobe, spore-forming, Gram-positive bacterium that was isolated from industry, papermill.

spore-forming Gram-positive rod-shaped aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 396971

DSM 28439,CCUG 55240

@ref 20215

Last LPSN update 2026-02-09 11:23:56

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Paenibacillaceae

Genus Paenibacillus

Species Paenibacillus chartarius

Full scientific name Paenibacillus chartarius Kämpfer et al. 2012

BacDive ID	Other strains from **Paenibacillus chartarius** (3)	Type strain
100565	P. chartarius SF000284(FSU),
100566	P. chartarius SF000315(FSU),
100567	P. chartarius SF000796(FSU),

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Motility
30400	positive	2.5 µm	0.9 µm	rod-shaped

Pigmentation

30400

Productionyes

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
20709	CASO AGAR (MERCK 105458) (DSMZ Medium 220)		Medium recipe at MediaDive	Name: CASO AGAR (Merck 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
20709	positive	growth	30
30400	positive	growth	15-45
30400	positive	optimum	30
60508	positive	growth	37
67770	positive	growth	28

Culture pH

@ref	Ability	Type	PH
30400	positive	optimum	6.5
30400	positive	growth	5.5-7.5

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
30400	aerobe
60508	aerobe

Spore formation

30400

Spore formationyes

Halophily

@ref	Salt	Growth	Tested relation	Concentration
30400	NaCl	positive	growth	1-3 %

Observation

67770

Observationquinones: MK-7

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
30400	17057 ChEBI	cellobiose	+	carbon source
30400	28757 ChEBI	fructose	+	carbon source
30400	28260 ChEBI	galactose	+	carbon source
30400	24265 ChEBI	gluconate	+	carbon source
30400	17234 ChEBI	glucose	+	carbon source
30400	17306 ChEBI	maltose	+	carbon source
30400	29864 ChEBI	mannitol	+	carbon source
30400	37684 ChEBI	mannose	+	carbon source
30400	26546 ChEBI	rhamnose	+	carbon source
30400	17814 ChEBI	salicin	+	carbon source
30400	17992 ChEBI	sucrose	+	carbon source
30400	27082 ChEBI	trehalose	+	carbon source
30400	18222 ChEBI	xylose	+	carbon source

Enzymes

@ref	Value	Activity	Ec
30400	cytochrome oxidase	+	1.9.3.1
30400	gelatinase	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2
#Engineered	#Industrial

Isolation

@ref	Sample type	Sampling date	Geographic location	Country	Country ISO 3 Code	Continent
20709	industry, papermill		Karlstad	Sweden	SWE	Europe
60508	Papermill,industry	2007-09-01	Karlstad	Sweden	SWE	Europe
67770	Industrial paper mill			Sweden	SWE	Europe

Taxonmaps

69479

Global distribution of 16S sequence FN689718 (>99% sequence identity) for Paenibacillus chartarius subclade from Microbeatlas

Aquatic Samples	38
Soil Samples	362
Animal Samples	21
Plant Samples	21
Total Samples	442

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
20709	1	Risk group (German classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	NCBI tax ID	Score
124043	ASM4243282v1 assembly for Paenibacillus chartarius CCM 7759	scaffold	GCA_042432825	747481	49.77

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20709	Paenibacillus chartarius partial 16S rRNA gene, strain CCUG 55240	FN689718	1407	747481
124043	Paenibacillus chartarius partial 16S rRNA gene, type strain CCUG 55240T	FR832878	1407	747481
124043	Paenibacillus chartarius strain CCM 7759 16S ribosomal RNA gene, partial sequence.	MT760175	1352	747481

GC content

20709

GC-content (mol%)53.9

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
	Flood-Driven Microbial Resurgence: Functional Shifts and Beneficial Taxa in Post-Flood Agricultural and Residential Soils in Bangladesh.	Rahman T, Haider SMA, Khan FTZ, Islam MS, Mahmud ZH, Karim MM, Rahman M, Jubair M.	Microbiologyopen	10.1002/mbo3.70069	2025
	Diversity and antimicrobial potential of the culturable rhizobacteria from medicinal plant Baccharis trimera Less D.C.	Jardim ACM, de Oliveira JE, Alves LM, Gutuzzo GO, de Oliveira ALM, Rodrigues EP.	Braz J Microbiol	10.1007/s42770-022-00759-5	2022
Phylogeny	Paenibacillus chartarius sp. nov., isolated from a paper mill.	Kampfer P, Falsen E, Lodders N, Martin K, Kassmannhuber J, Busse HJ	Int J Syst Evol Microbiol	10.1099/ijs.0.035154-0	2011

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20709	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 28439
#26737	IJSEM 1342 2012 ( DOI 10.1099/ijs.0.035154-0 , PubMed 21828020 )
#30400	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26737
#60508	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 55240
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Paenibacillus chartarius (DSM 28439, CCM 7759, CCUG 55240)

Name and taxonomic classification

Morphology

Cell morphology

Pigmentation

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Observation

Metabolite utilization

Enzymes

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_042432825

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

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