Legionella pneumophila subsp. pneumophila W872 is a microaerophile bacterium that was isolated from Water.
microaerophile genome sequence Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order Legionellales |
| Family Legionellaceae |
| Genus Legionella |
| Species Legionella pneumophila subsp. pneumophila |
| Full scientific name Legionella pneumophila subsp. pneumophila (Brenner et al. 1979) Brenner et al. 1989 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 20626 | BCYE-AGAR (DSMZ Medium 585) | Medium recipe at MediaDive | Name: BCYE AGAR (DSMZ Medium 585) Composition: OXOID Legionella CYE-Agar base |
| Metadata FA analysis | |||||||||||||||||||||||||||||||||||||||||||
| type of FA analysis | whole cell analysis | ||||||||||||||||||||||||||||||||||||||||||
| method/protocol | CCUG | ||||||||||||||||||||||||||||||||||||||||||
| @ref | 63428 | ||||||||||||||||||||||||||||||||||||||||||
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| @ref | Biosafety level | Biosafety level comment | |
|---|---|---|---|
| 20626 | 2 | Risk group (German classification) |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | 54332_D01 assembly for Legionella pneumophila NCTC12821 | contig | 446 | 78.29 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 96.10 | no |
| 125439 | motility | BacteriaNetⓘ | yes | 53.60 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 98.26 | no |
| 125439 | spore_formation | BacteriaNetⓘ | no | 99.61 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 97.98 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 96.39 | yes |
| 125438 | spore-forming | spore-formingⓘ | no | 91.45 | no |
| 125438 | aerobic | aerobicⓘ | no | 77.07 | no |
| 125438 | thermophilic | thermophileⓘ | no | 96.93 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 60.70 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Validation of a Loop-Mediated Isothermal Amplification-Based Kit for the Detection of Legionella pneumophila in Environmental Samples According to ISO/TS 12869:2012. | Caruso G, Coniglio MA, Lagana P, Fasciana T, Arcoleo G, Arrigo I, Di Carlo P, Palermo M, Giammanco A. | Microorganisms | 10.3390/microorganisms12050961 | 2024 | ||
| Antibiotic Susceptibility of Environmental Legionella pneumophila Strains Isolated in Northern Italy. | Cocuzza CE, Martinelli M, Perdoni F, Giubbi C, Vinetti MEA, Calaresu E, Frugoni S, Scaturro M, Ricci ML, Musumeci R. | Int J Environ Res Public Health | 10.3390/ijerph18179352 | 2021 | ||
| Evaluation of an Environmental Transport Medium for Legionella pneumophila Recovery. | Martinelli M, Calaresu E, Musumeci R, Giubbi C, Perdoni F, Frugoni S, Castriciano S, Scaturro M, Ricci ML, Cocuzza CE. | Int J Environ Res Public Health | 10.3390/ijerph18168551 | 2021 | ||
| A Proactive Environmental Approach for Preventing Legionellosis in Infants: Water Sampling and Antibiotic Resistance Monitoring, a 3-Years Survey Program. | Alexandropoulou I, Parasidis T, Konstantinidis T, Panopoulou M, Constantinidis TC. | Healthcare (Basel) | 10.3390/healthcare7010039 | 2019 | ||
| Paper-based immunoassay based on 96-well wax-printed paper plate combined with magnetic beads and colorimetric smartphone-assisted measure for reliable detection of SARS-CoV-2 in saliva. | Fabiani L, Mazzaracchio V, Moscone D, Fillo S, De Santis R, Monte A, Amatore D, Lista F, Arduini F. | Biosens Bioelectron | 10.1016/j.bios.2021.113909 | 2022 | ||
| Metabolic Characterization of Supernatants Produced by Lactobacillus spp. With in vitro Anti-Legionella Activity. | Fuochi V, Coniglio MA, Laghi L, Rescifina A, Caruso M, Stivala A, Furneri PM. | Front Microbiol | 10.3389/fmicb.2019.01403 | 2019 | ||
| Isolation and identification of Legionella spp. from different aquatic sources in south-west of Iran by molecular &culture methods. | Tabatabaei M, Hemati Z, Moezzi MO, Azimzadeh N. | Mol Biol Res Commun | 2016 | |||
| First Case of Legionnaire's Disease Caused by Legionella anisa in Spain and the Limitations on the Diagnosis of Legionella non-pneumophila Infections. | Vaccaro L, Izquierdo F, Magnet A, Hurtado C, Salinas MB, Gomes TS, Angulo S, Salso S, Pelaez J, Tejeda MI, Alhambra A, Gomez C, Enriquez A, Estirado E, Fenoy S, Del Aguila C. | PLoS One | 10.1371/journal.pone.0159726 | 2016 | ||
| Legionella feeleii: Ubiquitous Pathogen in the Environment and Causative Agent of Pneumonia. | Vaccaro L, Gomes TS, Izquierdo F, Magnet A, Llorens Berzosa S, Ollero D, Salso S, Alhambra A, Gomez C, Lopez Cano M, Pelaz C, Bellido Samaniego B, Del Aguila C, Fenoy S, Hurtado-Marcos C. | Front Microbiol | 10.3389/fmicb.2021.707187 | 2021 | ||
| Opportunistic Pathogens in Drinking Water Distribution Systems-A Review. | LeChevallier MW, Prosser T, Stevens M. | Microorganisms | 10.3390/microorganisms12050916 | 2024 | ||
| Enzymology | Simple lysis of bacterial cells for DNA-based diagnostics using hydrophilic ionic liquids. | Martzy R, Bica-Schroder K, Palvolgyi AM, Kolm C, Jakwerth S, Kirschner AKT, Sommer R, Krska R, Mach RL, Farnleitner AH, Reischer GH. | Sci Rep | 10.1038/s41598-019-50246-5 | 2019 | |
| Interaction of Legionella pneumophila and Helicobacter pylori with bacterial species isolated from drinking water biofilms. | Giao MS, Azevedo NF, Wilks SA, Vieira MJ, Keevil CW. | BMC Microbiol | 10.1186/1471-2180-11-57 | 2011 | ||
| Legionella pneumophila persists within biofilms formed by Klebsiella pneumoniae, Flavobacterium sp., and Pseudomonas fluorescens under dynamic flow conditions. | Stewart CR, Muthye V, Cianciotto NP. | PLoS One | 10.1371/journal.pone.0050560 | 2012 | ||
| Enzymology | Development of a novel DNA microarray to detect bacterial pathogens in patients with chronic obstructive pulmonary disease (COPD). | Curran T, Coulter WA, Fairley DJ, McManus T, Kidney J, Larkin M, Moore JE, Coyle PV. | J Microbiol Methods | 10.1016/j.mimet.2010.01.004 | 2010 | |
| Metabolism | Targeting species-specific low-affinity 16S rRNA binding sites by using peptide nucleic acids for detection of Legionellae in biofilms. | Wilks SA, Keevil CW. | Appl Environ Microbiol | 10.1128/aem.02918-05 | 2006 | |
| Biotechnology | A real-time PCR assay for the detection of Campylobacter jejuni in foods after enrichment culture. | Sails AD, Fox AJ, Bolton FJ, Wareing DR, Greenway DL. | Appl Environ Microbiol | 10.1128/aem.69.3.1383-1390.2003 | 2003 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20626 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 27564 |
| #63428 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 67715 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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https://doi.org/10.13145/bacdive24145.20260601.11
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