Name: Mobilitalea sibirica P3M-3
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 24121

Type strain:

Species: Mobilitalea sibirica

Strain Designation: P3M-3

Culture col. no.: DSM 26468, KCTC 15522, VKM B-2804

Strain history: <- DSM <- OA Podosocorskaya, Winogradsky Inst. Microbiol., RAS, Moscow, Russia, P3M-3

NCBI tax ID(s): 1462919 (species)

SI-ID 407666

DSM 26468

Section

Mobilitalea sibirica P3M-3 is an anaerobe, spore-forming, mesophilic bacterium that was isolated from microbial mat in a wooden bath flooded with hot water from a 2775 m-deep well.

motile
rod-shaped
spore-forming
anaerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Clostridia*
	Order	*Eubacteriales*
	Family	*Lachnospiraceae*
	Genus	*Mobilitalea*
	Species	**Mobilitalea sibirica**
	Full Scientific Name (LPSN)	Mobilitalea sibirica Podosokorskaya et al. 2014

Information on morphological and physiological properties Morphology

[Ref.: #67771]	Gram stain	positive
[Ref.: #69480]	Gram stain	positive Confidence in %99.999

[Ref.: #67771]	Cell shape	rod-shaped

[Ref.: #67771]	Motility	yes
[Ref.: #69480]	Motility	yes Confidence in %91.325

Information on culture and growth conditions Culture and growth conditions

[Ref.: #21347]

Culture medium

DESULFOFARCIMEN MEDIUM (DSMZ Medium 124)

[Ref.: #21347]

Culture medium growth

[Ref.: #21347]

Culture medium link

Medium recipe at MediaDive

[Ref.: #21347]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #21347]			growth	37 °C
[Ref.: #67771]			growth	37 °C

[Ref.: #21347]	Temperature range	mesophilic
[Ref.: #67771]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #21347]	Oxygen tolerance	anaerobe
[Ref.: #67771]	Oxygen tolerance	anaerobe
[Ref.: #69480]	Oxygen tolerance	anaerobe Confidence in %100

[Ref.: #67771]	Type of spore	spore
[Ref.: #67771]	Ability of spore formation	yes
[Ref.: #69481]	Ability of spore formation	yes Confidence in %100

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #21347]	Sample type/isolated from	microbial mat in a wooden bath flooded with hot water from a 2775 m-deep well
[Ref.: #21347]	Geographic location (country and/or sea, region)	Tomsk region, Parabel' district (58° 50' 05.3'' N 81° 30' 07.5'' E)
[Ref.: #21347]	Country	Russia
[Ref.: #21347]	Country ISO 3 Code	RUS
[Ref.: #21347]	Continent	Asia
[Ref.: #21347]	Geographic location	58.8348°/81.5021°

[Ref.: #67771]	Sample type/isolated from	From microbial mat in a wooden bath flooded with hot water from a 2775 m-deep well
[Ref.: #67771]	Geographic location (country and/or sea, region)	Parabel' district, Tomsk region(Siberia)
[Ref.: #67771]	Country	Russia
[Ref.: #67771]	Country ISO 3 Code	RUS
[Ref.: #67771]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	-
#Environmental	#Microbial community	#Microbial mat
#Condition	#Thermophilic (>45°C)	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KF931641 (>99% sequence identity) for Mobilitalea sibirica subclade from Microbeatlas

Aquatic Samples	20
Soil Samples	4
Animal Samples	13
Plant Samples
Total Samples	37

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #21347]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #21347]	Mobilitalea sibirica strain P3M-3 16S ribosomal RNA gene, partial sequence	KF931641	1444	ENA	1462919 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Mobilitalea sibirica DSM 26468	GCA_015999265	contig	GenBank	1462919 tax ID	*
[Ref.: #66792]	Mobilitalea sibirica strain DSM 26468	1462919.3	wgs	PATRIC	1462919 tax ID	*

[Ref.: #21347]

GC-content

33.4 mol%

thermal denaturation, midpoint method (Tm)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Mobilitalea sibirica strain DSM 26468 PATRIC: 1462919.3
[Ref.: #69481]	spore-forming	yes	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Mobilitalea sibirica strain DSM 26468 PATRIC: 1462919.3
[Ref.: #69480]	motile	yes	85.027	yes
[Ref.: #69480]	gram-positive	yes	88.315	yes
[Ref.: #69480]	anaerobic	yes	98.017	no
[Ref.: #69480]	aerobic	no	97.425	yes
[Ref.: #69480]	halophile	no	81.355	no
[Ref.: #69480]	spore-forming	yes	91.574	yes
[Ref.: #69480]	thermophile	no	81.852	no
[Ref.: #69480]	glucose-util	yes	85.996	no
[Ref.: #69480]	flagellated	no	53.496	no
[Ref.: #69480]	glucose-ferment	yes	69.341	no

Availability in culture collections External links

[Ref.: #21347]

Culture collection no.

DSM 26468, KCTC 15522, VKM B-2804

[Ref.: #88081]

SI-ID 407666

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Mobilisporobacter senegalensis gen. nov., sp. nov., an anaerobic bacterium isolated from tropical shea cake.	Mbengue M, Thioye A, Labat M, Casalot L, Joseph M, Samb A, Ben Ali Gam Z	Int J Syst Evol Microbiol	10.1099/ijsem.0.000889	2016	*
Phylogeny	Mobilitalea sibirica gen. nov., sp. nov., a halotolerant polysaccharide-degrading bacterium.	Podosokorskaya OA, Bonch-Osmolovskaya EA, Beskorovaynyy AV, Toshchakov SV, Kolganova TV, Kublanov IV	Int J Syst Evol Microbiol	10.1099/ijs.0.057109-0	2014	*
Phylogeny	Variimorphobacter saccharofermentans gen. nov., sp. nov., a new member of the family Lachnospiraceae, isolated from a maize-fed biogas fermenter.	Rettenmaier R, Thieme N, Streubel J, Di Bello L, Kowollik ML, Huang L, Maus I, Klingl A, Liebl W, Zverlov VV	Int J Syst Evol Microbiol	10.1099/ijsem.0.005044	2021	*
Genetics	Draft Genome Sequence of Mobilitalea sibirica Strain P3M-3(T), the Sole Representative of the Genus Mobilitalea.	Thieme N, Rettenmaier R, Liebl W, Zverlov VV	Microbiol Resour Announc	10.1128/MRA.00129-21	2021	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#21347

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 26468

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#88081

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID407666.1 )

* These data were automatically processed and therefore are not curated

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Mobilitalea sibirica strain DSM 26468

Mobilitalea sibirica strain DSM 26468

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