Name: Desulfocurvus thunnarius DSM 26129
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 23898

Type strain:

Species: Desulfocurvus thunnarius

Culture col. no.: DSM 26129, JCM 18546, Olac 40

Strain history: M.-L. Fardeau Olac 40.

NCBI tax ID(s): 1312905 (species)

SI-ID 405715

DSM 26129

Section

Desulfocurvus thunnarius DSM 26129 is an anaerobe, mesophilic, Gram-negative bacterium that was isolated from sludge from an anaerobic sequencing batch reactor treating tuna cooking wastewater.

Gram-negative
motile
rod-shaped
anaerobe
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Deltaproteobacteria*
	Order	*Desulfovibrionales*
	Family	*Desulfovibrionaceae*
	Genus	*Desulfocurvus*
	Species	**Desulfocurvus thunnarius**
	Full Scientific Name (LPSN)	Desulfocurvus thunnarius Hamdi et al. 2013

Information on morphological and physiological properties Morphology

[Ref.: #31087]	Gram stain	negative

[Ref.: #31087]	Cell length	6 µm

[Ref.: #31087]	Cell width	0.5 µm

[Ref.: #31087]	Cell shape	rod-shaped

[Ref.: #31087]	Motility	yes

Information on culture and growth conditions Culture and growth conditions

[Ref.: #21203]

Culture medium

DESULFOVIBRIO (MV) MEDIUM (DSMZ Medium 641)

[Ref.: #21203]

Culture medium growth

[Ref.: #21203]

Culture medium link

Medium recipe at MediaDive

[Ref.: #21203]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #21203]	growth	37 °C
[Ref.: #31087]	growth	20-50 °C
[Ref.: #31087]	optimum	40 °C
[Ref.: #67770]	growth	37 °C

[Ref.: #21203]	Temperature range	mesophilic
[Ref.: #31087]	Temperature range	thermophilic
[Ref.: #67770]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #31087]			optimum	7.1
[Ref.: #31087]			growth	05-09

Information on physiology and metabolism Physiology and metabolism

[Ref.: #21203]	Oxygen tolerance	anaerobe
[Ref.: #31087]	Oxygen tolerance	anaerobe

[Ref.: #31087]

Ability of spore formation

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #31087]		NaCl		growth	0-5	%
[Ref.: #31087]		NaCl		optimum	0.2	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #31087]	acetate ChEBI	+	carbon source
[Ref.: #31087]	formate ChEBI	+	carbon source
[Ref.: #31087]	lactate ChEBI	+	carbon source
[Ref.: #31087]	pyruvate ChEBI	+	carbon source

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #21203]	Sample type/isolated from	sludge from an anaerobic sequencing batch reactor treating tuna cooking wastewater
[Ref.: #21203]	Geographic location (country and/or sea, region)	INSAT Tunis
[Ref.: #21203]	Country	Tunisia
[Ref.: #21203]	Country ISO 3 Code	TUN
[Ref.: #21203]	Continent	Africa

[Ref.: #67770]	Sample type/isolated from	Anaerobic sequencing batch reactor treating tuna cooking wastewater in Tunisia
* marker position based on {}

Isolation sources categories

#Engineered	#Bioreactor	-
#Engineered	#Waste	#Wastewater
#Environmental	#Terrestrial	#Mud (Sludge)
#Condition	#Anoxic (anaerobic)	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KC513819 (>99% sequence identity) for Desulfocurvus thunnarius from Microbeatlas

Aquatic Samples	121
Soil Samples	27
Animal Samples	5
Plant Samples	3
Total Samples	156

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #21203]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #21203]	Desulfocurvus thunnarius strain Olac 40 16S ribosomal RNA gene, partial sequence	KC513819	1517	ENA	1312905 tax ID

[Ref.: #21203]	GC-content	70 mol%	high performance liquid chromatography (HPLC)
[Ref.: #31087]	GC-content	70 mol%

Availability in culture collections External links

[Ref.: #21203]

Culture collection no.

DSM 26129, JCM 18546, Olac 40

[Ref.: #87908]

SI-ID 405715

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Isolation and characterization of Desulfocurvus thunnarius sp. nov., a sulfate-reducing bacterium isolated from an anaerobic sequencing batch reactor treating cooking wastewater.	Hamdi O, Ben Hania W, Postec A, Bartoli M, Hamdi M, Bouallagui H, Fauque G, Ollivier B, Fardeau ML	Int J Syst Evol Microbiol	10.1099/ijs.0.051664-0	2013	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#21203

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 26129

#31087

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27416 (see below)

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#87908

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID405715.1 )

#27416

IJSEM 4237 2013 ( DOI 10.1099/ijs.0.051664-0 , PubMed 23811135 )

* These data were automatically processed and therefore are not curated

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