Melaminivora alkalimesophila (DSM 26006, CCTCC AB 2012024, CY 1)

Name: Melaminivora alkalimesophila (DSM 26006, CCTCC AB 2012024, CY 1)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 23874

Type strain

Culture col. no. DSM 26006 CCTCC AB 2012024 CY 1

NCBI tax ID(s) 1165852

Special Collections DSMZ

History DSMZ <- L. Jiangwei, Chinese Academy of Science, Inst. of Urban Environment and Health, China; CY1 <- H. Wang, Chinese Academy of Sciences, Urban Environment

Links

Melaminivora alkalimesophila DSM 26006 is a bacterium that was isolated from wastewater sludge of a melamine-producing factory.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 401418

DSM 26006

@ref 20215

Last LPSN update 2026-05-29 08:30:31

Domain Bacteria

Phylum Pseudomonadota

Class Betaproteobacteria

Order Burkholderiales

Family Comamonadaceae

Genus Melaminivora

Species Melaminivora alkalimesophila

Full scientific name Melaminivora alkalimesophila Wang et al. 2014

Morphology

Cell morphology

@ref	Gram stain	Confidence
125439	negative	98.486
125438	negative	97.985

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
21340	R2A MEDIUM (DSMZ Medium 830)		Medium recipe at MediaDive	Name: R2A MEDIUM (DSMZ Medium 830) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
21340	positive	growth	28

Physiology and metabolism

Spore formation

@ref	Spore formation	Confidence
125438		93.938
125439		99.873

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Industrial	#Plant (Factory)
#Engineered	#Waste	#Sewage sludge
#Engineered	#Waste	#Wastewater

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude
21340	wastewater sludge of a melamine-producing factory	Fujian Province, Sanming city (117° 16.097' E 26° 37.193' N)	China	CHN	Asia	26.6199	117.268 26.6199/117.268

Taxonmaps

69479

Global distribution of 16S sequence JQ676982 (>99% sequence identity) for Melaminivora alkalimesophila from Microbeatlas

Aquatic Samples	257
Soil Samples	72
Animal Samples	363
Plant Samples	635
Total Samples	1327

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
21340	1	Risk group (German classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM318237v1 assembly for Melaminivora alkalimesophila DSM 26006	scaffold	GCA_003182375	1165852.3	2770939489	1165852	73.54

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
21340	Melaminivora alkalimesophila strain CY1 16S ribosomal RNA gene, partial sequence	JQ676982	1436		1165852

GC content

@ref	GC-content (mol%)	Method
21340	69.5	high performance liquid chromatography (HPLC)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM318237v1 assembly for Melaminivora alkalimesophila DSM 26006
BV-BRC: 1165852.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	aerobe	89.64	no
125439	gram_stain	BacteriaNetⓘ	negative	98.49	no
125439	motility	BacteriaNetⓘ	yes	87.24	no
125439	spore_formation	BacteriaNetⓘ	no	99.87	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Melaminivora alkalimesophila DSM 26006
NCBI: GCA_003182375.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	97.99	no
125438	anaerobic	anaerobicⓘ	no	95.01	no
125438	aerobic	aerobicⓘ	yes	81.23	no
125438	spore-forming	spore-formingⓘ	no	93.94	no
125438	thermophilic	thermophileⓘ	no	92.73	yes
125438	flagellated	motile2+ⓘ	yes	79.79	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Pulveribacter suum gen. nov., sp. nov., isolated from a pig farm dust collector.	Heo J, Cho HY, Heo I, Hong SB, Kim JS, Kwon SW, Kim SJ	Int J Syst Evol Microbiol	10.1099/ijsem.0.003082	2019
Phylogeny	Oryzisolibacter propanilivorax gen. nov., sp. nov., a propanil-degrading bacterium.	Vaz-Moreira I, Narciso-da-Rocha C, Lopes AR, Carvalho G, Lobo-da-Cunha A, Whitman WB, Snauwaert C, Vandamme P, Manaia CM, Nunes OC	Int J Syst Evol Microbiol	10.1099/ijsem.0.002184	2017
Phylogeny	Melaminivora jejuensis sp. nov., isolated from Swinery waste.	Kim JY, Park SH, Lee DH, Song G, Kim YJ	Int J Syst Evol Microbiol	10.1099/ijsem.0.002294	2017
Phylogeny	Melaminivora alkalimesophila gen. nov., sp. nov., a melamine-degrading betaproteobacterium isolated from a melamine-producing factory.	Wang H, Li J, Hu A, Qin D, Xu H, Yu CP	Int J Syst Evol Microbiol	10.1099/ijs.0.055103-0	2014

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#21340	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 26006
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Melaminivora alkalimesophila (DSM 26006, CCTCC AB 2012024, CY 1)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Spore formation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_003182375

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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