Name: Thalassotalea piscium T202
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 23867

Type strain:

Species: Thalassotalea piscium

Strain Designation: T202

Culture col. no.: DSM 26287, JCM 18590, KCTC 32144

Strain history: X.-H. Zhang and Y. Zhang T202.

NCBI tax ID(s): 1230533 (species)

SI-ID 404281

DSM 26287

Section

Thalassotalea piscium T202 is a mesophilic, motile bacterium that was isolated from gill of a cultured flounder .

motile
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Alteromonadales*
	Family	*Colwelliaceae*
	Genus	*Thalassotalea*
	Species	**Thalassotalea piscium**
	Full Scientific Name (LPSN)	Thalassotalea piscium Zhang et al. 2014

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %99.966

[Ref.: #69480]	Motility	yes Confidence in %98.808

Information on culture and growth conditions Culture and growth conditions

[Ref.: #21324]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

[Ref.: #21324]

Culture medium growth

[Ref.: #21324]

Culture medium link

Medium recipe at MediaDive

[Ref.: #21324]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #21324]			growth	28 °C
[Ref.: #67770]			growth	28 °C

[Ref.: #21324]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.993

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #21324]	Sample type/isolated from	gill of a cultured flounder (Paralichthys olivaceus)
[Ref.: #21324]	Host species	Paralichthys olivaceus
[Ref.: #21324]	Geographic location (country and/or sea, region)	Shandong Province
[Ref.: #21324]	Country	China
[Ref.: #21324]	Country ISO 3 Code	CHN
[Ref.: #21324]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Gill of a cultured flounder (Paralichthys olivaceus) in Shandong Province
[Ref.: #67770]	Host species	Paralichthys olivaceus
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Engineered	#Food production	#Aquaculture
#Host	#Fishes	-
#Host Body-Site	#Organ	#Vascular system

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence JX412957 (>99% sequence identity) for Thalassotalea piscium subclade from Microbeatlas

Aquatic Samples	835
Soil Samples	8
Animal Samples	26
Plant Samples	1
Total Samples	870

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #21324]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #21324]	Thalassotalea piscium strain T202 16S ribosomal RNA gene, partial sequence	JX412957	1505	ENA	1230533 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Thalassotalea piscium DSM 26287	GCA_014207645	scaffold	GenBank	1230533 tax ID	*
[Ref.: #66792]	Thalassotalea piscium strain DSM 26287	1230533.4	wgs	PATRIC	1230533 tax ID	*
[Ref.: #66792]	Thalassotalea piscium DSM 26287	2861639327	draft	JGI IMG/M	1230533 tax ID	*

[Ref.: #21324]

GC-content

37 mol%

high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Thalassotalea piscium DSM 26287 NCBI: GCA_014207645.1
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Thalassotalea piscium DSM 26287 NCBI: GCA_014207645.1
[Ref.: #69480]	flagellated	yes	82.733	no
[Ref.: #69480]	gram-positive	no	98.793	no
[Ref.: #69480]	anaerobic	no	98.895	no
[Ref.: #69480]	aerobic	yes	80.208	no
[Ref.: #69480]	halophile	no	55.352	no
[Ref.: #69480]	spore-forming	no	95.963	no
[Ref.: #69480]	glucose-util	yes	87.54	no
[Ref.: #69480]	thermophile	no	99.677	yes
[Ref.: #69480]	motile	yes	89.066	no
[Ref.: #69480]	glucose-ferment	no	84.211	no

Availability in culture collections External links

[Ref.: #21324]

Culture collection no.

DSM 26287, JCM 18590, KCTC 32144

[Ref.: #87879]

SI-ID 404281

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Description of Thalassotalea piscium gen. nov., sp. nov., isolated from flounder (Paralichthys olivaceus), reclassification of four species of the genus Thalassomonas as members of the genus Thalassotalea gen. nov. and emended description of the genus Thalassomonas.	Zhang Y, Tang K, Shi X, Zhang XH	Int J Syst Evol Microbiol	10.1099/ijs.0.055913-0	2014	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#21324

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 26287

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#87879

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID404281.1 )

* These data were automatically processed and therefore are not curated

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Thalassotalea piscium DSM 26287

Thalassotalea piscium DSM 26287

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