Name: Paraoerskovia marina CTT-37
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 2386

Type strain:

Species: Paraoerskovia marina

Strain Designation: CTT-37

Culture col. no.: DSM 21750, NBRC 104352

Strain history: <- NBRC <- S. T. Khan, Natl. Inst. of Technol. and Evaluation (NITE), Japan; CTT-37

NCBI tax ID(s): 1122933 (strain), 545619 (species)

SI-ID 401556

DSM 21750

Other strains from Paraoerskovia marina

P. marina DSW-2, DSM 22126, KCTC 13436, JCM ...
P. marina HR08-1, DSM 22763, NBRC 105853

Section

Paraoerskovia marina CTT-37 is a facultative anaerobe, mesophilic, Gram-positive bacterium that was isolated from sea sediment from a beach.

Gram-positive
rod-shaped
facultative anaerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micrococcales*
	Family	*Promicromonosporaceae*
	Genus	*Paraoerskovia*
	Species	**Paraoerskovia marina**
	Full Scientific Name (LPSN)	Paraoerskovia marina Khan et al. 2009

Synonym

Koreibacter algae

Information on morphological and physiological properties Morphology

[Ref.: #30628]	Gram stain	positive
[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #30628]	Cell length	1.3 µm

[Ref.: #30628]	Cell width	0.5 µm

[Ref.: #30628]	Cell shape	rod-shaped

[Ref.: #30628]	Motility	no
[Ref.: #69480]	Motility	no Confidence in %93.89

[Ref.: #18344]	Colony color	Light ivory (1015)
[Ref.: #18344]	Incubation period	10-14 days
[Ref.: #18344]	Cultivation medium used	ISP 2

[Ref.: #18344]	Colony color	Sulfur yellow (1016)
[Ref.: #18344]	Incubation period	10-14 days
[Ref.: #18344]	Cultivation medium used	ISP 3

[Ref.: #18344]	Colony color	Sulfur yellow (1016)
[Ref.: #18344]	Incubation period	10-14 days
[Ref.: #18344]	Cultivation medium used	ISP 4

[Ref.: #18344]	Colony color	Sulfur yellow (1016)
[Ref.: #18344]	Incubation period	10-14 days
[Ref.: #18344]	Cultivation medium used	ISP 5

[Ref.: #18344]	Colony color	Light ivory (1015)
[Ref.: #18344]	Incubation period	10-14 days
[Ref.: #18344]	Cultivation medium used	ISP 6

[Ref.: #18344]	Colony color	Zinc yellow (1018)
[Ref.: #18344]	Incubation period	10-14 days
[Ref.: #18344]	Cultivation medium used	ISP 7

[Ref.: #30628]

Pigment production

yes

[Ref.: #18344]	Multicellular complex forming ability	no
[Ref.: #18344]	Medium Name (multicellularity)	ISP 2

[Ref.: #18344]	Multicellular complex forming ability	no
[Ref.: #18344]	Medium Name (multicellularity)	ISP 3

[Ref.: #18344]	Multicellular complex forming ability	no
[Ref.: #18344]	Medium Name (multicellularity)	ISP 4

[Ref.: #18344]	Multicellular complex forming ability	no
[Ref.: #18344]	Medium Name (multicellularity)	ISP 5

[Ref.: #18344]	Multicellular complex forming ability	no
[Ref.: #18344]	Medium Name (multicellularity)	ISP 6

[Ref.: #18344]	Multicellular complex forming ability	no
[Ref.: #18344]	Medium Name (multicellularity)	ISP 7

Information on culture and growth conditions Culture and growth conditions

[Ref.: #15857]

Culture medium

TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)

[Ref.: #15857]

Culture medium growth

[Ref.: #15857]

Culture medium link

Medium recipe at MediaDive

[Ref.: #15857]

Culture medium composition

expand / minimize

[Ref.: #18344]

Culture medium

ISP 2

[Ref.: #18344]

Culture medium growth

[Ref.: #18344]

Culture medium composition

expand / minimize

[Ref.: #18344]

Culture medium

ISP 3

[Ref.: #18344]

Culture medium growth

[Ref.: #18344]

Culture medium composition

expand / minimize

[Ref.: #18344]

Culture medium

ISP 4

[Ref.: #18344]

Culture medium growth

[Ref.: #18344]

Culture medium composition

expand / minimize

[Ref.: #18344]

Culture medium

ISP 5

[Ref.: #18344]

Culture medium growth

[Ref.: #18344]

Culture medium composition

expand / minimize

[Ref.: #18344]

Culture medium

ISP 6

[Ref.: #18344]

Culture medium growth

[Ref.: #18344]

Culture medium composition

expand / minimize

[Ref.: #18344]

Culture medium

ISP 7

[Ref.: #18344]

Culture medium growth

[Ref.: #18344]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #15857]	growth	28 °C
[Ref.: #18344]	optimum	28 °C
[Ref.: #30628]	growth	10-35 °C
[Ref.: #30628]	optimum	28 °C

[Ref.: #15857]	Temperature range	mesophilic
[Ref.: #18344]	Temperature range	mesophilic
[Ref.: #30628]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #30628]			optimum	7.5
[Ref.: #30628]			growth	06-10

Information on physiology and metabolism Physiology and metabolism

[Ref.: #30628]

Oxygen tolerance

facultative anaerobe

[Ref.: #69481]	Ability of spore formation	no Confidence in %97
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.986

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #30628]		NaCl		growth	0-8	%
[Ref.: #30628]		NaCl		optimum	4	%

[Ref.: #15857]	Murein short key	A11.48
[Ref.: #15857]	Murein types	A4alpha L-Lys-L-Ser-D-Glu

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #18344]	arabinose ChEBI	+
[Ref.: #30628]	arabinose ChEBI	+	carbon source
[Ref.: #30628]	cellobiose ChEBI	+	carbon source
[Ref.: #18344]	cellulose ChEBI	-
[Ref.: #68379]	D-glucose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	D-mannitol ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	D-ribose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	D-xylose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	esculin ChEBI	-	hydrolysis	* from API Coryne
[Ref.: #18344]	fructose ChEBI	+
[Ref.: #30628]	fructose ChEBI	+	carbon source
[Ref.: #30628]	galactose ChEBI	+	carbon source
[Ref.: #68379]	gelatin ChEBI	-	hydrolysis	* from API Coryne
[Ref.: #18344]	glucose ChEBI	+
[Ref.: #30628]	glucose ChEBI	+	carbon source
[Ref.: #30628]	glycogen ChEBI	+	carbon source
[Ref.: #68379]	glycogen ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	lactose ChEBI	-	fermentation	* from API Coryne
[Ref.: #30628]	maltose ChEBI	+	carbon source
[Ref.: #68379]	maltose ChEBI	-	fermentation	* from API Coryne
[Ref.: #18344]	mannitol ChEBI	-
[Ref.: #30628]	mannose ChEBI	+	carbon source
[Ref.: #18344]	myo-inositol ChEBI	-
[Ref.: #68379]	nitrate ChEBI	-	reduction	* from API Coryne
[Ref.: #18344]	raffinose ChEBI	-
[Ref.: #18344]	rhamnose ChEBI	+
[Ref.: #18344]	sucrose ChEBI	+
[Ref.: #30628]	sucrose ChEBI	+	carbon source
[Ref.: #68379]	sucrose ChEBI	-	fermentation	* from API Coryne
[Ref.: #30628]	trehalose ChEBI	+	carbon source
[Ref.: #68379]	urea ChEBI	-	hydrolysis	* from API Coryne
[Ref.: #18344]	xylose ChEBI	-
[Ref.: #30628]	xylose ChEBI	+	carbon source
	Only first 10 entries are displayed. Click here to see all.

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68382]	alkaline phosphatase	-	3.1.3.1	* from API zym, API Coryne
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	+	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym, API Coryne
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym, API Coryne
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym, API Coryne
[Ref.: #68382]	beta-glucuronidase	+	3.2.1.31	* from API zym, API Coryne
[Ref.: #30628]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	-		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #68379]	gelatinase	-		* from API Coryne
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym, API Coryne
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #68379]	pyrazinamidase	-	3.5.1.B15	* from API Coryne
[Ref.: #68379]	pyrrolidonyl arylamidase	-	3.4.19.3	* from API Coryne
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #68379]	urease	-	3.5.1.5	* from API Coryne
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® Coryne:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitrateNIT	PyrazinamidasePYZ	Pyrrolidonyl arylamidasePYRA	Alkaline phosphatasePAL	beta-Glucuronidasebeta GUR	beta-Galactosidasebeta GAL	alpha-Glucosidasealpha GLU	N-Acetyl-beta-Glucosidasebeta NAG	Esculin hydrolysis/beta-GlucosidaseESC	Urease/urea hydrolysisURE	Gelatinase/gelatin hydrolysisGEL	Control fermentationControl	Fermentation of D-glucoseGLU	Fermentation of D-riboseRIB	Fermentation of D-xyloseXYL	Fermentation of D-mannitolMAN	Fermentation of maltoseMAL	Fermentation of lactoseLAC	Fermentation of sucroseSAC	Fermentation of glycogenGLYG	CatalaseCAT
[Ref.: #18344]	34	-	-	-	-	+	-	-	-	-	-	-	not determinedn.d.	-	-	-	-	-	-	-	-	not determinedn.d.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #18344]	54	not determinedn.d.	-	-	+	-	+	-	-	-	-	+	+	+	-	+	-	-	-	-	-

	Pathway	Enzyme coverage	Annotated reactions
	Pathway annotation	Computationally determined by
[Ref.: #66794]	cellulose degradation	100	5 of 5
[Ref.: #66794]	starch degradation	100	10 of 10
[Ref.: #66794]	methylglyoxal degradation	100	5 of 5
[Ref.: #66794]	ppGpp biosynthesis	100	4 of 4
[Ref.: #66794]	cis-vaccenate biosynthesis	100	2 of 2
[Ref.: #66794]	palmitate biosynthesis	100	22 of 22
[Ref.: #66794]	acetate fermentation	100	4 of 4
[Ref.: #66794]	threonine metabolism	100	10 of 10
[Ref.: #66794]	cardiolipin biosynthesis	100	7 of 7
[Ref.: #66794]	adipate degradation	100	2 of 2
[Ref.: #66794]	anapleurotic synthesis of oxalacetate	100	1 of 1
[Ref.: #66794]	aerobactin biosynthesis	100	1 of 1
[Ref.: #66794]	suberin monomers biosynthesis	100	2 of 2
[Ref.: #66794]	folate polyglutamylation	100	1 of 1
[Ref.: #66794]	UDP-GlcNAc biosynthesis	100	3 of 3
[Ref.: #66794]	CDP-diacylglycerol biosynthesis	100	2 of 2
[Ref.: #66794]	coenzyme A metabolism	100	4 of 4
[Ref.: #66794]	formaldehyde oxidation	100	3 of 3
[Ref.: #66794]	serine metabolism	88.89	8 of 9
[Ref.: #66794]	chorismate metabolism	88.89	8 of 9
[Ref.: #66794]	gluconeogenesis	87.5	7 of 8
[Ref.: #66794]	photosynthesis	85.71	12 of 14
[Ref.: #66794]	tetrahydrofolate metabolism	85.71	12 of 14
[Ref.: #66794]	reductive acetyl coenzyme A pathway	85.71	6 of 7
[Ref.: #66794]	heme metabolism	85.71	12 of 14
[Ref.: #66794]	pentose phosphate pathway	81.82	9 of 11
[Ref.: #66794]	vitamin K metabolism	80	4 of 5
[Ref.: #66794]	Entner Doudoroff pathway	80	8 of 10
[Ref.: #66794]	lipoate biosynthesis	80	4 of 5
[Ref.: #66794]	factor 420 biosynthesis	80	4 of 5
[Ref.: #66794]	peptidoglycan biosynthesis	80	12 of 15
[Ref.: #66794]	metabolism of amino sugars and derivatives	80	4 of 5
[Ref.: #66794]	glycogen metabolism	80	4 of 5
[Ref.: #66794]	flavin biosynthesis	80	12 of 15
[Ref.: #66794]	valine metabolism	77.78	7 of 9
[Ref.: #66794]	NAD metabolism	77.78	14 of 18
[Ref.: #66794]	molybdenum cofactor biosynthesis	77.78	7 of 9
[Ref.: #66794]	vitamin B1 metabolism	76.92	10 of 13
[Ref.: #66794]	phenylalanine metabolism	76.92	10 of 13
[Ref.: #66794]	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	75	6 of 8
[Ref.: #66794]	C4 and CAM-carbon fixation	75	6 of 8
[Ref.: #66794]	sulfopterin metabolism	75	3 of 4
[Ref.: #66794]	isoleucine metabolism	75	6 of 8
[Ref.: #66794]	pyrimidine metabolism	73.33	33 of 45
[Ref.: #66794]	proline metabolism	72.73	8 of 11
[Ref.: #66794]	alanine metabolism	72.41	21 of 29
[Ref.: #66794]	glutamate and glutamine metabolism	71.43	20 of 28
[Ref.: #66794]	glycolysis	70.59	12 of 17
[Ref.: #66794]	purine metabolism	68.09	64 of 94
[Ref.: #66794]	glycolate and glyoxylate degradation	66.67	4 of 6
[Ref.: #66794]	octane oxidation	66.67	2 of 3
[Ref.: #66794]	CO2 fixation in Crenarchaeota	66.67	6 of 9
[Ref.: #66794]	d-mannose degradation	66.67	6 of 9
[Ref.: #66794]	acetoin degradation	66.67	2 of 3
[Ref.: #66794]	L-lactaldehyde degradation	66.67	2 of 3
[Ref.: #66794]	acetyl CoA biosynthesis	66.67	2 of 3
[Ref.: #66794]	oxidative phosphorylation	64.84	59 of 91
[Ref.: #66794]	citric acid cycle	64.29	9 of 14
[Ref.: #66794]	d-xylose degradation	63.64	7 of 11
[Ref.: #66794]	ketogluconate metabolism	62.5	5 of 8
[Ref.: #66794]	degradation of sugar alcohols	62.5	10 of 16
[Ref.: #66794]	isoprenoid biosynthesis	61.54	16 of 26
[Ref.: #66794]	non-pathway related	60.53	23 of 38
[Ref.: #66794]	propionate fermentation	60	6 of 10
[Ref.: #66794]	methionine metabolism	57.69	15 of 26
[Ref.: #66794]	ubiquinone biosynthesis	57.14	4 of 7
[Ref.: #66794]	cysteine metabolism	55.56	10 of 18
[Ref.: #66794]	aspartate and asparagine metabolism	55.56	5 of 9
[Ref.: #66794]	tryptophan metabolism	55.26	21 of 38
[Ref.: #66794]	histidine metabolism	55.17	16 of 29
[Ref.: #66794]	lipid metabolism	54.84	17 of 31
[Ref.: #66794]	metabolism of disaccharids	54.55	6 of 11
[Ref.: #66794]	arginine metabolism	54.17	13 of 24
[Ref.: #66794]	urea cycle	53.85	7 of 13
[Ref.: #66794]	leucine metabolism	53.85	7 of 13
[Ref.: #66794]	lysine metabolism	52.38	22 of 42
[Ref.: #66794]	degradation of sugar acids	52	13 of 25
[Ref.: #66794]	degradation of hexoses	50	9 of 18
[Ref.: #66794]	myo-inositol biosynthesis	50	5 of 10
[Ref.: #66794]	mannosylglycerate biosynthesis	50	1 of 2
[Ref.: #66794]	kanosamine biosynthesis II	50	1 of 2
[Ref.: #66794]	butanoate fermentation	50	2 of 4
[Ref.: #66794]	ethanol fermentation	50	1 of 2
[Ref.: #66794]	phenylmercury acetate degradation	50	1 of 2
[Ref.: #66794]	glycogen biosynthesis	50	2 of 4
[Ref.: #66794]	degradation of pentoses	50	14 of 28
[Ref.: #66794]	nitrate assimilation	44.44	4 of 9
[Ref.: #66794]	lipid A biosynthesis	44.44	4 of 9
[Ref.: #66794]	propanol degradation	42.86	3 of 7
[Ref.: #66794]	glutathione metabolism	42.86	6 of 14
[Ref.: #66794]	degradation of aromatic, nitrogen containing compounds	41.67	5 of 12
[Ref.: #66794]	glycine metabolism	40	4 of 10
[Ref.: #66794]	arachidonate biosynthesis	40	2 of 5
[Ref.: #66794]	sulfate reduction	38.46	5 of 13
[Ref.: #66794]	vitamin B6 metabolism	36.36	4 of 11
[Ref.: #66794]	tyrosine metabolism	35.71	5 of 14
[Ref.: #66794]	cyanate degradation	33.33	1 of 3
[Ref.: #66794]	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
[Ref.: #66794]	selenocysteine biosynthesis	33.33	2 of 6
[Ref.: #66794]	sulfoquinovose degradation	33.33	1 of 3
[Ref.: #66794]	sphingosine metabolism	33.33	2 of 6
[Ref.: #66794]	enterobactin biosynthesis	33.33	1 of 3
[Ref.: #66794]	IAA biosynthesis	33.33	1 of 3
[Ref.: #66794]	pantothenate biosynthesis	33.33	2 of 6
[Ref.: #66794]	carotenoid biosynthesis	31.82	7 of 22
[Ref.: #66794]	androgen and estrogen metabolism	31.25	5 of 16
[Ref.: #66794]	coenzyme M biosynthesis	30	3 of 10
[Ref.: #66794]	mevalonate metabolism	28.57	2 of 7
[Ref.: #66794]	dolichyl-diphosphooligosaccharide biosynthesis	27.27	3 of 11
[Ref.: #66794]	dTDPLrhamnose biosynthesis	25	2 of 8
[Ref.: #66794]	lactate fermentation	25	1 of 4
[Ref.: #66794]	CMP-KDO biosynthesis	25	1 of 4
[Ref.: #66794]	cyclohexanol degradation	25	1 of 4
[Ref.: #66794]	toluene degradation	25	1 of 4
[Ref.: #66794]	carnitine metabolism	25	2 of 8
[Ref.: #66794]	biotin biosynthesis	25	1 of 4
		Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #15857]	Sample type/isolated from	sea sediment from a beach
[Ref.: #15857]	Geographic location (country and/or sea, region)	coast of Tottori city
[Ref.: #15857]	Country	Japan
[Ref.: #15857]	Country ISO 3 Code	JPN
[Ref.: #15857]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Marine
#Environmental	#Aquatic	#Sediment

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AB445007 (>99% sequence identity) for Paraoerskovia marina from Microbeatlas

Aquatic Samples	29
Soil Samples	46
Animal Samples	19
Plant Samples	8
Total Samples	102

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #15857]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #15857]	Paraoerskovia marina gene for 16S rRNA, partial sequence	AB445007	1457	ENA	1122933 tax ID
[Ref.: #20218]	Paraoerskovia marina gene for 16S rRNA, partial sequence, strain: NBRC 104352	AB695379	1478	ENA	1122933 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Paraoerskovia marina DSM 21750	GCA_000701465	scaffold	GenBank	1122933 tax ID	*
[Ref.: #66792]	Paraoerskovia marina DSM 21750	1122933.3	wgs	PATRIC	1122933 tax ID	*
[Ref.: #66792]	Paraoerskovia marina DSM 21750	2561511089	draft	JGI IMG/M	1122933 tax ID	*

[Ref.: #15857]	GC-content	70 mol%	high performance liquid chromatography (HPLC)
[Ref.: #30628]	GC-content	70.8 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Paraoerskovia marina DSM 21750 DSM 21750 NCBI: GCA_000701465.1
[Ref.: #69481]	spore-forming	no	97	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Paraoerskovia marina DSM 21750 DSM 21750 NCBI: GCA_000701465.1
[Ref.: #69480]	motile	no	89.78	yes
[Ref.: #69480]	flagellated	no	97.966	yes
[Ref.: #69480]	gram-positive	yes	92.801	no
[Ref.: #69480]	anaerobic	no	99.039	yes
[Ref.: #69480]	halophile	no	68.838	no
[Ref.: #69480]	spore-forming	no	87.278	no
[Ref.: #69480]	thermophile	no	98.607	no
[Ref.: #69480]	glucose-util	yes	88.864	yes
[Ref.: #69480]	aerobic	yes	76.036	yes
[Ref.: #69480]	glucose-ferment	no	71.167	yes

Availability in culture collections External links

[Ref.: #15857]

Culture collection no.

DSM 21750, NBRC 104352

[Ref.: #71941]

SI-ID 401556

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Paraoerskovia sediminicola sp. nov., an actinobacterium isolated from sea sediment, and emended description of the genus Paraoerskovia.	Hamada M, Tamura T, Shibata C, Yamamura H, Hayakawa M, Schumann P, Suzuki KI	Int J Syst Evol Microbiol	10.1099/ijs.0.043745-0	2013	*
Phylogeny	Reclassification of Koreibacter algae as a later heterotypic synonym of Paraoerskovia marina and emended descriptions of the genus Paraoerskovia Khan et al. 2009 and of Paraoerskovia marina Khan et al. 2009.	Schumann P, Pukall R, Sproer C, Stackebrandt E	Int J Syst Evol Microbiol	10.1099/ijs.0.040600-0	2012	*
Phylogeny	Paraoerskovia marina gen. nov., sp. nov., an actinobacterium isolated from marine sediment.	Khan ST, Harayama S, Tamura T, Ando K, Takagi M, Kazuo SY	Int J Syst Evol Microbiol	10.1099/ijs.0.007666-0	2009	*

References

#15857

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 21750

#18344

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#30628

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26959 (see below)

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#66794

Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )

#68379

Automatically annotated from API Coryne .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#71941

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID401556.1 )

#26959

IJSEM 219 2013 ( DOI 10.1099/ijs.0.040600-0 , PubMed 22389283 )

* These data were automatically processed and therefore are not curated

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Search for species Paraoerskovia marina in external resources:
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Paraoerskovia marina DSM 21750 DSM 21750

Paraoerskovia marina DSM 21750 DSM 21750

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