Georgenia satyanarayanai (DSM 27632, KCTC 19802, NBRC 107612)

Name: Georgenia satyanarayanai (DSM 27632, KCTC 19802, NBRC 107612)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 23795

Type strain

Strain Designation JC82, 5NBRC 107612

Culture col. no. DSM 27632 KCTC 19802 NBRC 107612 JC82 5NBRC 107612

NCBI tax ID(s) 860221

Special Collections DSMZ KCTC Literature strains

History <- KCTC; KCTC 19802 <- Ch. Sasikala, Inst. Sci. Tech., India

Links

Georgenia satyanarayanai JC82 is an aerobe, Gram-positive, ovoid-shaped bacterium that was isolated from soda lake.

Gram-positive ovoid-shaped aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 26760

KCTC 19802,JCM 17755,NBRC 107612

@ref 20215

Last LPSN update 2026-02-09 11:23:48

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Micrococcales

Family Allobogoriellaceae

Genus Georgenia

Species Georgenia satyanarayanai

Full scientific name Georgenia satyanarayanai Srinivas et al. 2012

Synonyms (1)

Oceanitalea nanhaiensis

BacDive ID	Other strains from **Georgenia satyanarayanai** (1)	Type strain
162103	G. satyanarayanai JCM 17755, CGMCC 1.10826

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Confidence
30444	positive		1 µm	ovoid-shaped
30523	positive	1.2 µm	0.55 µm	rod-shaped
67771	positive
125439	positive				99.4

Colony morphology

@ref	Incubation period	Medium used
25050	2 days	Tryptic Soy Agar (TSA, Becton Dickinsons)

Pigmentation

@ref	Production
30444
30523

Culture and growth conditions

Culture medium

@ref	Name	Growth
25050	Tryptic Soy Agar (TSA, Becton Dickinsons)

Culture temp

@ref	Growth	Type	Temperature (°C)
30444	positive	optimum	37
30523	positive	growth	04-40
30523	positive	optimum	35
67771	positive	growth	37

Culture pH

@ref	Ability	Type	PH	PH range
30523	positive	optimum	8
30444	positive	optimum	8.5
30523	positive	growth	04-10	alkaliphile
30444	positive	growth	04-12

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
30444	aerobe
67771	aerobe

Halophily

@ref	Salt	Growth	Tested relation	Concentration
30444	NaCl	positive	growth	<5 %
30523	NaCl	positive	growth	01-10 %
30444	NaCl	positive	optimum	2 %

Murein

@ref	Murein short key	Type
20589	A11.54	A4alpha L-Lys-L-Glu

Observation

67771

Observationquinones: MK-8(H4)

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
30444	62064 ChEBI	2,3-butanediol	+	carbon source
25050	30916 ChEBI	2-oxoglutarate	-	carbon source
30444	28644 ChEBI	2-oxopentanoate	+	carbon source
25050	37054 ChEBI	3-hydroxybutyrate	-	carbon source
25050	91122 ChEBI	4-nitrophenyl alpha-D-glucopyranoside	+	hydrolysis
25050		4-nitrophenyl beta-D-galactopyranoside hydrolysate	+	hydrolysis
25050	90259 ChEBI	4-nitrophenyl beta-D-glucopyranoside	+	hydrolysis
25050	90146 ChEBI	4-nitrophenyl beta-D-glucuronide	-	hydrolysis
25050	90148 ChEBI	4-nitrophenyl beta-D-xylopyranoside	+	hydrolysis
30444	30089 ChEBI	acetate	+	carbon source
25050	17128 ChEBI	adipate	-	carbon source
30444	22599 ChEBI	arabinose	+	carbon source
30523	22599 ChEBI	arabinose	+	carbon source
25050	18305 ChEBI	arbutin	+	carbon source
25050	78208 ChEBI	azelaate	-	carbon source
25050	16958 ChEBI	beta-alanine	-	carbon source
25050	3122 ChEBI	bis-4-nitrophenyl phosphate	+	hydrolysis
25050	91050 ChEBI	bis-4-nitrophenyl-phenyl phosphonate	+	hydrolysis
25050	55394 ChEBI	bis-4-nitrophenyl-phosphorylcholine	-	hydrolysis
25050	17057 ChEBI	cellobiose	+	carbon source
30444	17057 ChEBI	cellobiose	+	carbon source
25050	16383 ChEBI	cis-aconitate	-	carbon source
25050	16947 ChEBI	citrate	-	carbon source
25050	15824 ChEBI	D-fructose	+	carbon source
25050	12936 ChEBI	D-galactose	+	carbon source
25050	17634 ChEBI	D-glucose	+	carbon source
25050	16899 ChEBI	D-mannitol	+	carbon source
25050	16024 ChEBI	D-mannose	+	carbon source
25050	16988 ChEBI	D-ribose	+	carbon source
25050	17924 ChEBI	D-sorbitol	+	carbon source
25050	65327 ChEBI	D-xylose	+	carbon source
30444	23652 ChEBI	dextrin	+	carbon source
25050	4853 ChEBI	esculin	+	hydrolysis
30444	28757 ChEBI	fructose	+	carbon source
25050	29806 ChEBI	fumarate	+	carbon source
30444	28260 ChEBI	galactose	+	carbon source
30444	24175 ChEBI	galacturonate	+	carbon source
25050	16865 ChEBI	gamma-aminobutyric acid	-	carbon source
25050		gamma-L-glutamate-4-nitroanilide	-	hydrolysis
25050	24265 ChEBI	gluconate	+	carbon source
30444	24265 ChEBI	gluconate	+	carbon source
30444	17234 ChEBI	glucose	+	carbon source
25050	17859 ChEBI	glutaric acid	-	carbon source
30444	17754 ChEBI	glycerol	+	carbon source
30444	28087 ChEBI	glycogen	+	carbon source
30523	28087 ChEBI	glycogen	+	carbon source
30444	17596 ChEBI	inosine	+	carbon source
25050	17240 ChEBI	itaconate	-	carbon source
25050	16977 ChEBI	L-alanine	-	carbon source
25050		L-alanine 4-nitroanilide	+	hydrolysis
25050	30849 ChEBI	L-arabinose	+	carbon source
25050	29991 ChEBI	L-aspartate	-	carbon source
25050	15971 ChEBI	L-histidine	-	carbon source
25050	15603 ChEBI	L-leucine	-	carbon source
25050	15589 ChEBI	L-malate	-	carbon source
25050	15729 ChEBI	L-ornithine	-	carbon source
25050	17295 ChEBI	L-phenylalanine	-	carbon source
25050	17203 ChEBI	L-proline	-	carbon source
25050		L-proline-4-nitroanilide	-	hydrolysis
25050	62345 ChEBI	L-rhamnose	-	carbon source
25050	17115 ChEBI	L-serine	-	carbon source
25050	16828 ChEBI	L-tryptophan	-	carbon source
25050	24996 ChEBI	lactate	-	carbon source
30444	25115 ChEBI	malate	+	carbon source
25050	68428 ChEBI	maltitol	+	carbon source
25050	17306 ChEBI	maltose	+	carbon source
30444	17306 ChEBI	maltose	+	carbon source
30523	29864 ChEBI	mannitol	+	carbon source
30444	37684 ChEBI	mannose	+	carbon source
25050	28053 ChEBI	melibiose	-	carbon source
25050	36986 ChEBI	mesaconate	-	carbon source
30444	51850 ChEBI	methyl pyruvate	+	carbon source
25050	17268 ChEBI	myo-inositol	-	carbon source
25050	28037 ChEBI	N-acetylgalactosamine	-	carbon source
25050	506227 ChEBI	N-acetylglucosamine	+	carbon source
30523	17632 ChEBI	nitrate	+	reduction
25050	17272 ChEBI	propionate	-	carbon source
25050	17148 ChEBI	putrescine	-	carbon source
25050	15361 ChEBI	pyruvate	-	carbon source
30444	15361 ChEBI	pyruvate	+	carbon source
25050	15963 ChEBI	ribitol	-	carbon source
30444	33942 ChEBI	ribose	+	carbon source
30523	33942 ChEBI	ribose	+	carbon source
25050	17814 ChEBI	salicin	-	carbon source
30444	17814 ChEBI	salicin	+	carbon source
30523	17814 ChEBI	salicin	+	carbon source
30444	30911 ChEBI	sorbitol	+	carbon source
25050	9300 ChEBI	suberic acid	-	carbon source
25050	17992 ChEBI	sucrose	+	carbon source
30444	17992 ChEBI	sucrose	+	carbon source
30444	17748 ChEBI	thymidine	+	carbon source
25050	15708 ChEBI	trans-aconitate	-	carbon source
25050	27082 ChEBI	trehalose	+	carbon source
30444	27082 ChEBI	trehalose	+	carbon source
30523	27082 ChEBI	trehalose	+	carbon source
30444	16704 ChEBI	uridine	+	carbon source
30444	18222 ChEBI	xylose	+	carbon source

Enzymes

@ref	Value	Activity	Ec
30523	alkaline phosphatase	+	3.1.3.1
30444	catalase	+	1.11.1.6

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	cellulose degradation	100	5 of 5
66794	acetate fermentation	100	4 of 4
66794	vitamin K metabolism	100	5 of 5
66794	palmitate biosynthesis	100	22 of 22
66794	sulfopterin metabolism	100	4 of 4
66794	coenzyme A metabolism	100	4 of 4
66794	formaldehyde oxidation	100	3 of 3
66794	glycogen metabolism	100	5 of 5
66794	cis-vaccenate biosynthesis	100	2 of 2
66794	aspartate and asparagine metabolism	100	9 of 9
66794	adipate degradation	100	2 of 2
66794	denitrification	100	2 of 2
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	starch degradation	100	10 of 10
66794	folate polyglutamylation	100	1 of 1
66794	ceramide biosynthesis	100	1 of 1
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	suberin monomers biosynthesis	100	2 of 2
66794	methylglyoxal degradation	100	5 of 5
66794	ppGpp biosynthesis	100	4 of 4
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	threonine metabolism	100	10 of 10
66794	Entner Doudoroff pathway	90	9 of 10
66794	chorismate metabolism	88.89	8 of 9
66794	C4 and CAM-carbon fixation	87.5	7 of 8
66794	ketogluconate metabolism	87.5	7 of 8
66794	heme metabolism	85.71	12 of 14
66794	reductive acetyl coenzyme A pathway	85.71	6 of 7
66794	photosynthesis	85.71	12 of 14
66794	glycolate and glyoxylate degradation	83.33	5 of 6
66794	glycolysis	82.35	14 of 17
66794	pyrimidine metabolism	82.22	37 of 45
66794	glutamate and glutamine metabolism	82.14	23 of 28
66794	metabolism of disaccharids	81.82	9 of 11
66794	pentose phosphate pathway	81.82	9 of 11
66794	lipoate biosynthesis	80	4 of 5
66794	metabolism of amino sugars and derivatives	80	4 of 5
66794	peptidoglycan biosynthesis	80	12 of 15
66794	flavin biosynthesis	80	12 of 15
66794	purine metabolism	78.72	74 of 94
66794	tetrahydrofolate metabolism	78.57	11 of 14
66794	citric acid cycle	78.57	11 of 14
66794	molybdenum cofactor biosynthesis	77.78	7 of 9
66794	serine metabolism	77.78	7 of 9
66794	valine metabolism	77.78	7 of 9
66794	phenylalanine metabolism	76.92	10 of 13
66794	butanoate fermentation	75	3 of 4
66794	glycogen biosynthesis	75	3 of 4
66794	isoleucine metabolism	75	6 of 8
66794	gluconeogenesis	75	6 of 8
66794	dTDPLrhamnose biosynthesis	75	6 of 8
66794	alanine metabolism	72.41	21 of 29
66794	NAD metabolism	72.22	13 of 18
66794	cardiolipin biosynthesis	71.43	5 of 7
66794	propionate fermentation	70	7 of 10
66794	leucine metabolism	69.23	9 of 13
66794	oxidative phosphorylation	69.23	63 of 91
66794	octane oxidation	66.67	2 of 3
66794	acetyl CoA biosynthesis	66.67	2 of 3
66794	CO2 fixation in Crenarchaeota	66.67	6 of 9
66794	sulfoquinovose degradation	66.67	2 of 3
66794	d-mannose degradation	66.67	6 of 9
66794	selenocysteine biosynthesis	66.67	4 of 6
66794	L-lactaldehyde degradation	66.67	2 of 3
66794	acetoin degradation	66.67	2 of 3
66794	proline metabolism	63.64	7 of 11
66794	d-xylose degradation	63.64	7 of 11
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	62.5	5 of 8
66794	degradation of sugar alcohols	62.5	10 of 16
66794	vitamin B1 metabolism	61.54	8 of 13
66794	isoprenoid biosynthesis	61.54	16 of 26
66794	methionine metabolism	61.54	16 of 26
66794	lipid metabolism	61.29	19 of 31
66794	cysteine metabolism	61.11	11 of 18
66794	degradation of pentoses	60.71	17 of 28
66794	non-pathway related	60.53	23 of 38
66794	glycine betaine biosynthesis	60	3 of 5
66794	factor 420 biosynthesis	60	3 of 5
66794	ubiquinone biosynthesis	57.14	4 of 7
66794	glutathione metabolism	57.14	8 of 14
66794	histidine metabolism	55.17	16 of 29
66794	arginine metabolism	54.17	13 of 24
66794	urea cycle	53.85	7 of 13
66794	tryptophan metabolism	52.63	20 of 38
66794	lysine metabolism	52.38	22 of 42
66794	degradation of sugar acids	52	13 of 25
66794	glycine metabolism	50	5 of 10
66794	kanosamine biosynthesis II	50	1 of 2
66794	phenylmercury acetate degradation	50	1 of 2
66794	myo-inositol biosynthesis	50	5 of 10
66794	CMP-KDO biosynthesis	50	2 of 4
66794	alginate biosynthesis	50	2 of 4
66794	mannosylglycerate biosynthesis	50	1 of 2
66794	ethanol fermentation	50	1 of 2
66794	bile acid biosynthesis, neutral pathway	47.06	8 of 17
66794	vitamin B6 metabolism	45.45	5 of 11
66794	ascorbate metabolism	45.45	10 of 22
66794	lipid A biosynthesis	44.44	4 of 9
66794	degradation of hexoses	44.44	8 of 18
66794	tyrosine metabolism	42.86	6 of 14
66794	propanol degradation	42.86	3 of 7
66794	degradation of aromatic, nitrogen containing compounds	41.67	5 of 12
66794	arachidonate biosynthesis	40	2 of 5
66794	chlorophyll metabolism	38.89	7 of 18
66794	carotenoid biosynthesis	36.36	8 of 22
66794	dolichyl-diphosphooligosaccharide biosynthesis	36.36	4 of 11
66794	cyanate degradation	33.33	1 of 3
66794	pantothenate biosynthesis	33.33	2 of 6
66794	nitrate assimilation	33.33	3 of 9
66794	enterobactin biosynthesis	33.33	1 of 3
66794	IAA biosynthesis	33.33	1 of 3
66794	sphingosine metabolism	33.33	2 of 6
66794	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
66794	androgen and estrogen metabolism	31.25	5 of 16
66794	coenzyme M biosynthesis	30	3 of 10
66794	benzoyl-CoA degradation	28.57	2 of 7
66794	mevalonate metabolism	28.57	2 of 7
66794	arachidonic acid metabolism	27.78	5 of 18
66794	cholesterol biosynthesis	27.27	3 of 11
66794	3-phenylpropionate degradation	26.67	4 of 15
66794	carnitine metabolism	25	2 of 8
66794	phenol degradation	25	5 of 20
66794	lactate fermentation	25	1 of 4
66794	cyclohexanol degradation	25	1 of 4
66794	toluene degradation	25	1 of 4
66794	methanogenesis from CO2	25	3 of 12
66794	phenylpropanoid biosynthesis	23.08	3 of 13
66794	sulfate reduction	23.08	3 of 13
66794	4-hydroxymandelate degradation	22.22	2 of 9

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Lake (large)
#Condition	#Alkaline	-

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
20589	soda lake	Lonar Lake	India	IND	Asia
67771	From sediment	Lonar Lake, Buldana, Maharashtra	India	IND	Asia

Taxonmaps

69479

Global distribution of 16S sequence FN995635 (>99% sequence identity) for Georgenia satyanarayanai subclade from Microbeatlas

Aquatic Samples	776
Soil Samples	2581
Animal Samples	3844
Plant Samples	616
Total Samples	7817

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
20589	1	Risk group (German classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	NCBI tax ID	Score
66792	ASM919313v1 assembly for Georgenia satyanarayanai NBRC 107612	contig	GCA_009193135	860221.5	860221	75.4

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20589	Georgenia satyanarayanai partial 16S rRNA gene, type strain JC82T	FN995635	1437		860221

GC content

@ref	GC-content (mol%)
20589	73.4
30523	62.3

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Georgenia satyanarayanai NBRC 107612
NCBI: GCA_009193135

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	60.20	no
125439	motility	BacteriaNetⓘ	no	79.50	no
125439	gram_stain	BacteriaNetⓘ	positive	99.40	no
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	88.30	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Georgenia satyanarayanai strain NBRC 107612
PATRIC: 860221.5

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	89.35	yes
125438	anaerobic	anaerobicⓘ	no	93.92	yes
125438	aerobic	aerobicⓘ	yes	76.02	yes
125438	spore-forming	spore-formingⓘ	no	67.99	no
125438	thermophilic	thermophileⓘ	no	97.50	yes
125438	flagellated	motile2+ⓘ	no	66.87	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Oceanitalea nanhaiensis Fu et al. 2012 is a later heterotypic synonym of Georgenia satyanarayanai Srinivas et al. 2012.	Kampfer P, Glaeser SP, Busse HJ	Int J Syst Evol Microbiol	10.1099/ijsem.0.001550	2016
Phylogeny	Georgenia satyanarayanai sp. nov., an alkaliphilic and thermotolerant amylase-producing actinobacterium isolated from a soda lake.	Srinivas A, Rahul K, Sasikala C, Subhash Y, Ramaprasad EVV, Ramana CV	Int J Syst Evol Microbiol	10.1099/ijs.0.036210-0	2011
Phylogeny	Georgenia faecalis sp. nov. isolated from the faeces of Tibetan antelope.	Wang X, Yang J, Huang Y, Wu X, Wang L, Han L, Li S, Li H, Fu X, Chen H, Zhu X	J Microbiol	10.1007/s12275-020-0060-1	2020

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20589	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 27632
#25050	P. G. Kämpfer, S. P.,Busse, H. J.: Oceanitalea nanhaiensis Fu et al. 2012 is a later heterotypic synonym of Georgenia satyanarayanai Srinivas et al. 2012. IJSEM 66: 5519 - 5522 2016 ( DOI 10.1099/ijsem.0.001550 , PubMed 27902219 )
#26780	IJSEM 2405 2012 ( DOI 10.1099/ijs.0.036210-0 , PubMed 22140168 )
#26855	IJSEM 2490 2012 ( DOI 10.1099/ijs.0.038018-0 , PubMed 22155759 )
#30444	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26780
#30523	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26855
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#67771	Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Georgenia satyanarayanai (DSM 27632, KCTC 19802, NBRC 107612)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Pigmentation

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Halophily

Murein

Observation

Metabolite utilization

Enzymes

Pathway annotation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_009193135

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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