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Information on genomic background e.g. entries in nucleic sequence databass
Sequence information
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16S Sequence information: |
Only first 5 entries are displayed. Click here to see all.Click here to see only first 5 entries. |
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|
Sequence accession description |
Seq. accession number |
Sequence length (bp) |
Sequence database |
Associated NCBI tax ID |
|
| [Ref.: #67770] |
Bifidobacterium moukalabense JCM 18751 gene for 16S rRNA, partial sequence |
LC521993 |
1470 |
|
1435051 tax ID |
| [Ref.: #20460] |
Bifidobacterium moukalabense gene for 16S ribosomal RNA, partial sequence, strain: JCM 18751 |
AB821293 |
1495 |
|
1435051 tax ID |
| [Ref.: #124043] |
Bifidobacterium moukalabense DSM 27321 16S-23S ribosomal RNA gene, partial sequence. |
KM009019 |
462 |
|
1681 tax ID |
* |
| [Ref.: #124043] |
Bifidobacterium moukalabense DSM 27321 16S-23S ribosomal RNA gene, partial sequence. |
KM009020 |
439 |
|
79262 tax ID |
* |
| [Ref.: #124043] |
Bifidobacterium moukalabense DSM 27321 16S-23S ribosomal RNA gene, partial sequence. |
KM009021 |
467 |
|
1150460 tax ID |
* |
| [Ref.: #124043] |
Bifidobacterium moukalabense DSM 27321 16S-23S ribosomal RNA gene, partial sequence. |
KM009022 |
459 |
|
1437612 tax ID |
* |
| [Ref.: #124043] |
Bifidobacterium moukalabense DSM 27321 16S-23S ribosomal RNA gene, partial sequence. |
KM009023 |
387 |
|
327277 tax ID |
* |
| [Ref.: #124043] |
Bifidobacterium moukalabense DSM 27321 16S-23S ribosomal RNA gene, partial sequence. |
KM009024 |
411 |
|
1684 tax ID |
* |
| [Ref.: #124043] |
Bifidobacterium moukalabense DSM 27321 16S-23S ribosomal RNA gene, partial sequence. |
KM009025 |
463 |
|
1435051 tax ID |
* |
| [Ref.: #124043] |
Bifidobacterium moukalabense DSM 27321 16S-23S ribosomal RNA gene, partial sequence. |
KM008979 |
447 |
|
1685 tax ID |
* |
| [Ref.: #124043] |
Bifidobacterium moukalabense DSM 27321 16S-23S ribosomal RNA gene, partial sequence. |
KM008980 |
432 |
|
1683 tax ID |
* |
| [Ref.: #124043] |
Bifidobacterium moukalabense DSM 27321 16S-23S ribosomal RNA gene, partial sequence. |
KM008981 |
444 |
|
33905 tax ID |
* |
| [Ref.: #124043] |
Bifidobacterium moukalabense DSM 27321 16S-23S ribosomal RNA gene, partial sequence. |
KM008982 |
558 |
|
35760 tax ID |
* |
| [Ref.: #124043] |
Bifidobacterium moukalabense DSM 27321 16S-23S ribosomal RNA gene, partial sequence. |
KM008983 |
437 |
|
78345 tax ID |
* |
| [Ref.: #124043] |
Bifidobacterium moukalabense DSM 27321 16S-23S ribosomal RNA gene, partial sequence. |
KM008984 |
412 |
|
1693 tax ID |
* |
| [Ref.: #124043] |
Bifidobacterium moukalabense DSM 27321 16S-23S ribosomal RNA gene, partial sequence. |
KM008985 |
478 |
|
367928 tax ID |
* |
| [Ref.: #124043] |
Bifidobacterium moukalabense DSM 27321 16S-23S ribosomal RNA gene, partial sequence. |
KM008986 |
403 |
|
1437611 tax ID |
* |
| [Ref.: #124043] |
Bifidobacterium moukalabense DSM 27321 16S-23S ribosomal RNA gene, partial sequence. |
KM008987 |
404 |
|
78448 tax ID |
* |
| [Ref.: #124043] |
Bifidobacterium moukalabense DSM 27321 16S-23S ribosomal RNA gene, partial sequence. |
KM008988 |
404 |
|
78344 tax ID |
* |
| [Ref.: #124043] |
Bifidobacterium moukalabense DSM 27321 16S-23S ribosomal RNA gene, partial sequence. |
KM008989 |
487 |
|
78346 tax ID |
* |
| [Ref.: #124043] |
Bifidobacterium moukalabense DSM 27321 16S-23S ribosomal RNA gene, partial sequence. |
KM008990 |
441 |
|
212365 tax ID |
* |
| [Ref.: #124043] |
Bifidobacterium moukalabense DSM 27321 16S-23S ribosomal RNA gene, partial sequence. |
KM008991 |
512 |
|
31954 tax ID |
* |
| [Ref.: #124043] |
Bifidobacterium moukalabense DSM 27321 16S-23S ribosomal RNA gene, partial sequence. |
KM008992 |
417 |
|
1687 tax ID |
* |
| [Ref.: #124043] |
Bifidobacterium moukalabense DSM 27321 16S-23S ribosomal RNA gene, partial sequence. |
KM008993 |
473 |
|
158787 tax ID |
* |
| [Ref.: #124043] |
Bifidobacterium moukalabense DSM 27321 16S-23S ribosomal RNA gene, partial sequence. |
KM008994 |
417 |
|
1437606 tax ID |
* |
| [Ref.: #124043] |
Bifidobacterium moukalabense DSM 27321 16S-23S ribosomal RNA gene, partial sequence. |
KM008995 |
452 |
|
77635 tax ID |
* |
| [Ref.: #124043] |
Bifidobacterium moukalabense DSM 27321 16S-23S ribosomal RNA gene, partial sequence. |
KM008996 |
431 |
|
471511 tax ID |
* |
| [Ref.: #124043] |
Bifidobacterium moukalabense DSM 27321 16S-23S ribosomal RNA gene, partial sequence. |
KM008997 |
477 |
|
356829 tax ID |
* |
| [Ref.: #124043] |
Bifidobacterium moukalabense DSM 27321 16S-23S ribosomal RNA gene, partial sequence. |
KM008998 |
409 |
|
518643 tax ID |
* |
| [Ref.: #124043] |
Bifidobacterium moukalabense DSM 27321 16S-23S ribosomal RNA gene, partial sequence. |
KM008999 |
443 |
|
1437610 tax ID |
* |
| [Ref.: #124043] |
Bifidobacterium moukalabense DSM 27321 16S-23S ribosomal RNA gene, partial sequence. |
KM009000 |
449 |
|
1437609 tax ID |
* |
| [Ref.: #124043] |
Bifidobacterium moukalabense DSM 27321 16S-23S ribosomal RNA gene, partial sequence. |
KM009001 |
438 |
|
1437607 tax ID |
* |
| [Ref.: #124043] |
Bifidobacterium moukalabense DSM 27321 16S-23S ribosomal RNA gene, partial sequence. |
KM009002 |
481 |
|
762211 tax ID |
* |
| [Ref.: #124043] |
Bifidobacterium moukalabense DSM 27321 16S-23S ribosomal RNA gene, partial sequence. |
KM009003 |
416 |
|
1437608 tax ID |
* |
| [Ref.: #124043] |
Bifidobacterium moukalabense DSM 27321 16S-23S ribosomal RNA gene, partial sequence. |
KM009004 |
351 |
|
1692 tax ID |
* |
| [Ref.: #124043] |
Bifidobacterium moukalabense DSM 27321 16S-23S ribosomal RNA gene, partial sequence. |
KM009005 |
416 |
|
1341694 tax ID |
* |
| [Ref.: #124043] |
Bifidobacterium moukalabense DSM 27321 16S-23S ribosomal RNA gene, partial sequence. |
KM009006 |
519 |
|
1690 tax ID |
* |
| [Ref.: #124043] |
Bifidobacterium moukalabense DSM 27321 16S-23S ribosomal RNA gene, partial sequence. |
KM009007 |
430 |
|
1437605 tax ID |
* |
| [Ref.: #124043] |
Bifidobacterium moukalabense DSM 27321 16S-23S ribosomal RNA gene, partial sequence. |
KM009008 |
475 |
|
302912 tax ID |
* |
| [Ref.: #124043] |
Bifidobacterium moukalabense DSM 27321 16S-23S ribosomal RNA gene, partial sequence. |
KM009009 |
452 |
|
1150423 tax ID |
* |
| [Ref.: #124043] |
Bifidobacterium moukalabense DSM 27321 16S-23S ribosomal RNA gene, partial sequence. |
KM009010 |
459 |
|
555970 tax ID |
* |
| [Ref.: #124043] |
Bifidobacterium moukalabense DSM 27321 16S-23S ribosomal RNA gene, partial sequence. |
KM009011 |
589 |
|
1688 tax ID |
* |
| [Ref.: #124043] |
Bifidobacterium moukalabense DSM 27321 16S-23S ribosomal RNA gene, partial sequence. |
KM009012 |
460 |
|
566552 tax ID |
* |
| [Ref.: #124043] |
Bifidobacterium moukalabense DSM 27321 16S-23S ribosomal RNA gene, partial sequence. |
KM009013 |
471 |
|
561180 tax ID |
* |
| [Ref.: #124043] |
Bifidobacterium moukalabense DSM 27321 16S-23S ribosomal RNA gene, partial sequence. |
KM009014 |
459 |
|
547043 tax ID |
* |
| [Ref.: #124043] |
Bifidobacterium moukalabense DSM 27321 16S-23S ribosomal RNA gene, partial sequence. |
KM009015 |
386 |
|
218140 tax ID |
* |
| [Ref.: #124043] |
Bifidobacterium moukalabense DSM 27321 16S-23S ribosomal RNA gene, partial sequence. |
KM009016 |
435 |
|
78343 tax ID |
* |
| [Ref.: #124043] |
Bifidobacterium moukalabense DSM 27321 16S-23S ribosomal RNA gene, partial sequence. |
KM009017 |
443 |
|
391904 tax ID |
* |
| [Ref.: #124043] |
Bifidobacterium moukalabense DSM 27321 16S-23S ribosomal RNA gene, partial sequence. |
KM009018 |
442 |
|
1679 tax ID |
* |
|
|
Genome sequence information: |
|
|
Sequence accession description |
Seq. accession number |
Assembly level |
Sequence database |
Associated NCBI tax ID |
|
| [Ref.: #67770] |
Bifidobacterium moukalabense DSM 27321 |
GCA_000522505 |
contig |
|
1435051 tax ID |
| [Ref.: #66792] |
Bifidobacterium moukalabense GG01T |
GCA_005405645 |
contig |
|
1333651 tax ID |
* |
| [Ref.: #66792] |
Bifidobacterium moukalabense DSM 27321 |
1435051.3 |
wgs |
|
1435051 tax ID |
* |
| [Ref.: #66792] |
Bifidobacterium moukalabense DSM 27321 |
2609460007 |
draft |
|
1435051 tax ID |
* |
|
| [Ref.: #20460] |
GC-content |
60.1 mol% |
high performance liquid chromatography (HPLC) |
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Availability in culture collections
External links
| [Ref.: #20460] |
Culture collection no. |
DSM 27321, JCM 18751 |
| [Ref.: #87820] |
SI-ID 406737
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* |
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Literature: |
|
Topic |
Title |
Authors |
Journal |
DOI |
Year |
|
| Genetics |
The Genome Sequence of Bifidobacterium moukalabense DSM 27321 Highlights the Close Phylogenetic Relatedness with the Bifidobacterium dentium Taxon. |
Lugli GA, Duranti S, Milani C, Turroni F, Viappiani A, Mangifesta M, van Sinderen D, Ventura M |
Genome Announc |
10.1128/genomeA.00048-14 |
2014 |
* |
| Phylogeny |
Bifidobacterium moukalabense sp. nov., isolated from the faeces of wild west lowland gorilla (Gorilla gorilla gorilla). |
Tsuchida S, Takahashi S, Nguema PPM, Fujita S, Kitahara M, Yamagiwa J, Ngomanda A, Ohkuma M, Ushida K |
Int J Syst Evol Microbiol |
10.1099/ijs.0.055186-0 |
2013 |
* |
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References
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| #20460 |
Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ;
DSM 27321
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| #67770 |
Japan Collection of Microorganism (JCM) ; Curators of the JCM;
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| #68371 |
Automatically annotated from API 50CH acid .
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| #87820 |
Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.:
StrainInfo: A central database for resolving microbial strain identifiers
.
(
DOI 10.60712/SI-ID406737.1 )
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| #124043 |
Isabel Schober, Julia Koblitz:
Data extracted from sequence databases, automatically matched based on designation and taxonomy .
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- * These data were automatically processed and therefore are not curated
Change proposal
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