Name: Bartonella senegalensis OS02
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 23786

Type strain:

Species: Bartonella senegalensis

Strain Designation: OS02

Culture col. no.: DSM 23168, CSUR B623

Strain history: <- O. Mediannikov, URMITE, UMR IRD 198/CNRS6236, Univ. Méditerranée, Marseille, France; OS02

NCBI tax ID(s): 1468418 (species)

SI-ID 400104

DSM 23168

Section

Bartonella senegalensis OS02 is a bacterium that was isolated from soft tick Ornithodoros sonrai collected in a rodent burrow.

16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Hyphomicrobiales*
	Family	*Bartonellaceae*
	Genus	*Bartonella*
	Species	**Bartonella senegalensis**
	Full Scientific Name (LPSN)	Bartonella senegalensis Mediannikov et al. 2014

Information on morphological and physiological properties Morphology

[Ref.: #20456]

Type of hemolysis

gamma

Information on physiology and metabolism Physiology and metabolism

	Enzyme	Enzyme activity	EC number
[Ref.: #68377]	alkaline phosphatase	-	3.1.3.1	* from API NH
[Ref.: #68377]	beta-galactosidase	-	3.2.1.23	* from API NH
[Ref.: #20456]	cytochrome-c oxidase	-	1.9.3.1
[Ref.: #68377]	lipase	-		* from API NH

API® NH:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Penicillinase productionPEN	Acid from D-glucoseGLU	Acid from D-fructoseFRU	Acid from maltoseMAL	Acid from sucroseSAC	Ornithine decarboxylaseODC	Urease/urea hydrolysisURE	LipaseLIP	Alkaline phosphatasePAL	beta-Galactosidasebeta GAL	Proline arylamidaseProA	gamma-Glutamyl transferaseGGT	Indole productionIND
[Ref.: #20456]	6193	+	+/-	+	+	-	-	-	-	-	-	+	-	-
[Ref.: #20456]	6192	-	-	-	-	-	+	-	-	-	-	+	-	+
[Ref.: #20456]	5680	+	-	-	-	-	-	+	-	-	-	-	+	-
[Ref.: #20456]	5679	-	+	+/-	+	+	-	-	-	-	-	-	+	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #20456]	Sample type/isolated from	soft tick Ornithodoros sonrai collected in a rodent burrow
[Ref.: #20456]	Host species	Ornithodoros sonrai
[Ref.: #20456]	Geographic location (country and/or sea, region)	Soulkhou Thissé village (13° 48' N 14° 56' W)
[Ref.: #20456]	Country	Senegal
[Ref.: #20456]	Country ISO 3 Code	SEN
[Ref.: #20456]	Continent	Africa
[Ref.: #20456]	Geographic location	13.8000°/-14.9333°
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	-
#Host	#Arthropoda	#Tick
#Host	#Mammals	#Rodentia (Other)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence HM636442 (>99% sequence identity) for Bartonella from Microbeatlas

Aquatic Samples	22
Soil Samples	29
Animal Samples	118
Plant Samples	3
Total Samples	172

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20456]	Bartonella senegalensis OS02 16S ribosomal RNA gene, partial sequence	HM636442	1410	ENA	929794 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Bartonella senegalensis OS02	GCA_000312545	scaffold	GenBank	929794 tax ID	*
[Ref.: #66792]	Bartonella senegalensis OS02	2547132167	draft	JGI IMG/M	929794 tax ID	*

[Ref.: #20456]

GC-content

38.6 mol%

sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Bartonella senegalensis OS02 OS02 NCBI: GCA_000312545.1
[Ref.: #69480]	motile	no	90.908	no
[Ref.: #69480]	flagellated	no	98.035	no
[Ref.: #69480]	gram-positive	no	98.014	no
[Ref.: #69480]	anaerobic	no	97.034	no
[Ref.: #69480]	aerobic	no	94.587	no
[Ref.: #69480]	halophile	no	58.853	no
[Ref.: #69480]	spore-forming	no	97.667	no
[Ref.: #69480]	glucose-util	yes	51.877	no
[Ref.: #69480]	thermophile	no	93.008	no
[Ref.: #69480]	glucose-ferment	no	75.863	no

Availability in culture collections External links

[Ref.: #20456]

Culture collection no.

DSM 23168, CSUR B623

[Ref.: #87818]

SI-ID 400104

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20456

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 23168

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68377

Automatically annotated from API NH .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#87818

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID400104.1 )

* These data were automatically processed and therefore are not curated

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Bartonella senegalensis OS02 OS02

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