Bartonella jaculi (DSM 28562, JCM 17712, KCTC 23655)

Name: Bartonella jaculi (DSM 28562, JCM 17712, KCTC 23655)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 23783

Type strain

Strain Designation OY2-1

Culture col. no. DSM 28562 JCM 17712 KCTC 23655 OY2-1

NCBI tax ID(s) 686226

Special Collections DSMZ JCM KCTC Literature strains

History DSMZ <- KCTC <- S. Maruyama; OY2-1 JCM <-- S. Sato OY2-1. KCTC <- S Maruyama, Nihon Unic., Japan

Links

Bartonella jaculi OY2-1 is an aerobe, Gram-negative, ovoid-shaped bacterium that was isolated from blood of greater Egyptian jerboa Jaculus orientalis; imported pet.

Gram-negative ovoid-shaped aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 404816

KCTC 23655,JCM 17712,DSM 28562

@ref 20215

Last LPSN update 2026-05-29 08:30:29

Domain Bacteria

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Hyphomicrobiales

Family Bartonellaceae

Genus Bartonella

Species Bartonella jaculi

Full scientific name Bartonella jaculi Sato et al. 2013

BacDive ID	Other strains from **Bartonella jaculi** (1)	Type strain
162084	B. jaculi JCM 17713, KCTC 23656

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape
30683	negative	1.45 µm	0.59 µm	ovoid-shaped
67771
67771	negative

Colony morphology

20453

Incubation period3-7 days

Pigmentation

30683

Productionyes

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
20453	COLUMBIA BLOOD AGAR (DSMZ Medium 429)		Medium recipe at MediaDive	Name: COLUMBIA BLOOD AGAR (DSMZ Medium 429; with strain-specific modifications) Composition: Horse blood 100.0 g/l Columbia agar base

Culture temp

@ref	Growth	Type	Temperature (°C)
20453	positive	growth	37
30683	positive	optimum	35
67770	positive	growth	35
67771	positive	growth	35

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
30683	aerobe
67771	microaerophile
125439	facultative anaerobe	94.077

Spore formation

@ref	Spore formation	Confidence
125439		99.825

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
30683	29016 ChEBI	arginine	+	carbon source
30683	15428 ChEBI	glycine	+	carbon source
30683	25017 ChEBI	leucine	+	carbon source
30683	26271 ChEBI	proline	+	carbon source

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Mammals	#Rodentia (Other)
#Host Body Product	#Fluids	#Blood

Isolation

@ref	Sample type	Host species	Country	Country ISO 3 Code	Continent
20453	blood of greater Egyptian jerboa Jaculus orientalis; imported pet	Jaculus orientalis	Japan	JPN	Asia
67770	Blood of greater Egyptian jerboa (Jaculus orientalis)	Jaculus orientalis
67771	From blood of greater Egyptian jerboa, `Jaculus orientalis`		Japan	JPN	Asia

Taxonmaps

69479

Global distribution of 16S sequence AB602527 (>99% sequence identity) for Bartonella from Microbeatlas

Aquatic Samples	6
Soil Samples	4
Animal Samples	49
Plant Samples	0
Total Samples	59

Interaction and safety

Risk assessment

@ref	Pathogenicity animal	Biosafety level	Biosafety level comment
20453	yes, in single cases	1	Risk group (German classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	NCBI tax ID	Score
124043	ASM3954304v1 assembly for Bartonella jaculi JCM 17712	scaffold	GCA_039543045	686226	32.05

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20453	Bartonella jaculi gene for 16S rRNA, partial sequence, strain: OY2-1	AB602527	1349		686226

GC content

20453

GC-content (mol%)37.4

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM3954304v1 assembly for Bartonella jaculi JCM 17712
NCBI: GCA_039543045

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	94.08	no
125439	gram_stain	BacteriaNetⓘ	negative	78.33	no
125439	spore_formation	BacteriaNetⓘ	no	99.83	no
125439	motility	BacteriaNetⓘ	no	80.33	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Bartonella jaculi sp. nov., Bartonella callosciuri sp. nov., Bartonella pachyuromydis sp. nov. and Bartonella acomydis sp. nov., isolated from wild Rodentia.	Sato S, Kabeya H, Fujinaga Y, Inoue K, Une Y, Yoshikawa Y, Maruyama S	Int J Syst Evol Microbiol	10.1099/ijs.0.041939-0	2012

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20453	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 28562
#27014	IJSEM 1734 2013 ( DOI 10.1099/ijs.0.041939-0 , PubMed 22941296 )
#30683	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27014
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#67771	Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Bartonella jaculi (DSM 28562, JCM 17712, KCTC 23655)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Pigmentation

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Metabolite utilization

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_039543045

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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