Name: Terribacillus aidingensis YI7-61
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 23755

Type strain:

Species: Terribacillus aidingensis

Strain Designation: YI7-61

Culture col. no.: DSM 28352, CGMCC 1.8913, NBRC 105790

Strain history: <- NBRC <- CGMCC 1.8913 <- S.-S. Yang, China Agric. Univ., College Biol. Sci., Beijing; YI7-61

NCBI tax ID(s): 586416 (species)

SI-ID 404083

DSM 28352

Special Collections

Section

Terribacillus aidingensis YI7-61 is an aerobe, spore-forming, Gram-positive bacterium that was isolated from soil.

Gram-positive
motile
rod-shaped
spore-forming
aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Bacillaceae*
	Genus	*Terribacillus*
	Species	**Terribacillus aidingensis**
	Full Scientific Name (LPSN)	Terribacillus aidingensis Liu et al. 2010

Information on morphological and physiological properties Morphology

[Ref.: #29625]	Gram stain	positive

[Ref.: #29625]	Cell length	1.2-3.5 µm

[Ref.: #29625]	Cell width	0.3-0.7 µm

[Ref.: #29625]	Cell shape	rod-shaped

[Ref.: #29625]	Motility	yes

[Ref.: #29625]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

[Ref.: #21155]

Culture medium

PAYNE, SEGHAL & GIBBONS MEDIUM (DSMZ Medium 1160)

[Ref.: #21155]

Culture medium growth

[Ref.: #21155]

Culture medium link

Medium recipe at MediaDive

[Ref.: #21155]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #21155]	growth	30 °C
[Ref.: #29625]	growth	04-48 °C
[Ref.: #29625]	optimum	30-37 °C

	pH	Kind of pH		pH
[Ref.: #29625]			optimum	06-07
[Ref.: #29625]			growth	05-09

Information on physiology and metabolism Physiology and metabolism

[Ref.: #29625]

Oxygen tolerance

aerobe

[Ref.: #29625]	Ability of spore formation	yes
[Ref.: #69480]	Ability of spore formation	yes Confidence in %92.827

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #29625]		NaCl		growth	0.5-21	%
[Ref.: #29625]		NaCl		optimum	03-07	%

[Ref.: #29625]

Observation

aggregates in chains

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #29625]	cellobiose ChEBI	+	carbon source
[Ref.: #29625]	fructose ChEBI	+	carbon source
[Ref.: #29625]	galactose ChEBI	+	carbon source
[Ref.: #29625]	glucose ChEBI	+	carbon source
[Ref.: #29625]	lactose ChEBI	+	carbon source
[Ref.: #29625]	mannitol ChEBI	+	carbon source
[Ref.: #29625]	melibiose ChEBI	+	carbon source
[Ref.: #29625]	raffinose ChEBI	+	carbon source
[Ref.: #29625]	sucrose ChEBI	+	carbon source
[Ref.: #29625]	trehalose ChEBI	+	carbon source

	Metabolite production	Metabolite	Production
[Ref.: #29625]		hydrogen sulfide ChEBI	yes
[Ref.: #29625]		indole ChEBI	yes

	Physiological tests	Metabolite	Indole test
[Ref.: #29625]		indole ChEBI	+

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #29625]		cytochrome oxidase	+	1.9.3.1

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #21155]	Sample type/isolated from	soil
[Ref.: #21155]	Geographic location (country and/or sea, region)	Xinjiang, Aiding salt lake
[Ref.: #21155]	Country	China
[Ref.: #21155]	Country ISO 3 Code	CHN
[Ref.: #21155]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence FJ386524 (>99% sequence identity) for Terribacillus from Microbeatlas

Aquatic Samples	268
Soil Samples	664
Animal Samples	511
Plant Samples	161
Total Samples	1604

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #21155]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #21155]	Terribacillus aidingensis strain YI7-61 16S ribosomal RNA gene, partial sequence	FJ386524	1472	GenBank ENA	586416 tax ID
[Ref.: #124043]	Terribacillus aidingensis gene for 16S rRNA, partial sequence, strain: NBRC 105790.	AB682296	1487	GenBank ENA	586416 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Terribacillus aidingensis CGMCC 1.8913	GCA_900215625	scaffold	GenBank ENA	586416 tax ID	*
[Ref.: #66792]	Terribacillus aidingensis strain CGMCC 1.8913	586416.5	wgs	PATRIC	586416 tax ID	*
[Ref.: #66792]	Terribacillus aidingensis CGMCC 1.8913	2681812962	draft	JGI IMG/M	586416 tax ID	*

[Ref.: #29625]	GC-content	44.6-45.0 mol%
[Ref.: #21155]	GC-content	45.0 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Terribacillus aidingensis CGMCC 1.8913 NCBI: GCA_900215625.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	86.443	yes
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	97.58	yes
[Ref.: #69480]	aerobic	aerobicⓘ	yes	80.831	yes
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	92.827	yes
[Ref.: #69480]	thermophilic	thermophileⓘ	no	94.845	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	yes	84.063	no

Availability in culture collections External links

[Ref.: #21155]

Culture collection no.

DSM 28352, CGMCC 1.8913, NBRC 105790

[Ref.: #87791]

SI-ID 404083

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Terribacillus aidingensis sp. nov., a moderately halophilic bacterium.	Liu W, Jiang L, Guo C, Yang SS	Int J Syst Evol Microbiol	10.1099/ijs.0.017228-0	2010	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#21155

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 28352

#29625

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26015 (see below)

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#87791

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID404083.1 )

#124043

Dr. Isabel Schober, Dr. Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .

#26015

IJSEM 2940 2010 ( DOI 10.1099/ijs.0.017228-0 , PubMed 20118295 )

* These data were automatically processed and therefore are not curated

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Terribacillus aidingensis CGMCC 1.8913

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