Gracilibacillus marinus (DSM 23372, CGMCC 1.10343, HB09003)

Name: Gracilibacillus marinus (DSM 23372, CGMCC 1.10343, HB09003)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 23744

Type strain

Strain Designation HB09003

Culture col. no. DSM 23372 CGMCC 1.10343 HB09003

NCBI tax ID(s) 630535

Special Collections DSMZ

Links

Gracilibacillus marinus HB09003 is a mesophilic prokaryote that was isolated from seawater sample.

mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 397285

DSM 23372

@ref 20215

Last LPSN update 2025-12-16 09:52:43

Domain Bacillati

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Bacillaceae

Genus Gracilibacillus

Species Gracilibacillus marinus

Full scientific name Gracilibacillus marinus Huang et al. 2024

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
20963	BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)		Medium recipe at MediaDive	Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514; with strain-specific modifications) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l MnSO4 0.01 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
20963	positive	growth	28	mesophilic

Physiology and metabolism

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Marine

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
20963	seawater sample	Hainan, Northern South China Sea	China	CHN	Asia

Taxonmaps

69479

Global distribution of 16S sequence FJ809748 (>99% sequence identity) for Gracilibacillus marinus from Microbeatlas

Aquatic Samples	27
Soil Samples	26
Animal Samples	30
Plant Samples	9
Total Samples	92

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	NCBI tax ID	Score
124043	ASM4265172v1 assembly for Gracilibacillus marinus CGMCC 1.10343	scaffold	GCA_042651725	630535	72.98

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20963	Gracilibacillus marinus 16S ribosomal RNA gene, partial sequence	FJ809748	1466		630535

GC content

20963

GC-content (mol%)34.1

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
	Validation List no. 216. Valid publication of new names and new combinations effectively published outside the IJSEM.	Oren A, Goker M.	Int J Syst Evol Microbiol	10.1099/ijsem.0.006229	2024
Phylogeny	Gracilibacillus marinus sp. nov., isolated from the northern South China Sea.	Huang HQ, Wang Y, Yuan WD, Xiao C, Ye JJ, Liu M, Zhu J, Sun QG, Bao SX	Antonie Van Leeuwenhoek	10.1007/s10482-013-9977-2	2013

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20963	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 23372
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Gracilibacillus marinus (DSM 23372, CGMCC 1.10343, HB09003)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_042651725

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

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