Alkalibacillus almallahensis (DSM 27545, CECT 8373, S1LM8)

Name: Alkalibacillus almallahensis (DSM 27545, CECT 8373, S1LM8)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 23585

Type strain

Strain Designation S1LM8

Culture col. no. DSM 27545 CECT 8373 S1LM8

NCBI tax ID(s) 1379154

Special Collections DSMZ

History <- M. Monteoliva-Sánchez, Univ. Granada, Campus Cartuja, Fac. Pharmacy, Spain; S1LM8 <- A. Perez-Davo

Links

Alkalibacillus almallahensis S1LM8 is a mesophilic prokaryote that was isolated from sediment from an inland solar saltern.

mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 394284

CECT 8373,DSM 27545

@ref 20215

Last LPSN update 2026-02-09 11:23:46

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Bacillaceae

Genus Alkalibacillus

Species Alkalibacillus almallahensis

Full scientific name Alkalibacillus almallahensis Pérez-Davó et al. 2014

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
20278	BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)		Medium recipe at MediaDive	Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514; with strain-specific modifications) Composition: NaCl 80.0 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
20278	positive	growth	30	mesophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	microaerophile	92.1

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Sediment
#Condition	#Saline	-

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude
20278	sediment from an inland solar saltern	Andalusia, Granada, La Malahá (37° 6' 5'' N 3° 43' 21'' W)	Spain	ESP	Europe	37.1014	-3.7225 37.1014/-3.7225

Taxonmaps

69479

Global distribution of 16S sequence KC968225 (>99% sequence identity) for Alkalibacillus from Microbeatlas

Aquatic Samples	219
Soil Samples	176
Animal Samples	274
Plant Samples	34
Total Samples	703

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
20278	1	Risk group (German classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM1176149v1 assembly for Alkalibacillus almallahensis CECT 8373	scaffold	GCA_011761495	1379154.3	2824469054	1379154	68.71

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20278	Alkalibacillus almallahensis strain S1LM8 16S ribosomal RNA gene, partial sequence	KC968225	1511		1379154

GC content

@ref	GC-content (mol%)	Method
20278	38.2	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Alkalibacillus almallahensis CECT 8373
NCBI: GCA_011761495

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	yes	50.20	no
125439	motility	BacteriaNetⓘ	yes	54.90	no
125439	gram_stain	BacteriaNetⓘ	positive	74.40	no
125439	oxygen_tolerance	BacteriaNetⓘ	microaerophile	92.10	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Alkalibacillus almallahensis CECT 8373
NCBI: GCA_011761495.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	80.49	no
125438	anaerobic	anaerobicⓘ	no	96.54	no
125438	aerobic	aerobicⓘ	yes	83.75	no
125438	spore-forming	spore-formingⓘ	yes	74.04	no
125438	thermophilic	thermophileⓘ	no	92.46	yes
125438	flagellated	motile2+ⓘ	yes	83.31	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Alkalibacillus almallahensis sp. nov., a halophilic bacterium isolated from an inland solar saltern.	Perez-Davo A, Aguilera M, Ramos-Cormenzana A, Monteoliva-Sanchez M	Int J Syst Evol Microbiol	10.1099/ijs.0.059121-0	2014

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20278	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 27545
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Alkalibacillus almallahensis (DSM 27545, CECT 8373, S1LM8)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_011761495

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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