Name: Aureimonas phyllosphaerae L9-479
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 23583

Type strain:

Species: Aureimonas phyllosphaerae

Strain Designation: L9-479

Culture col. no.: DSM 25024, KACC 16228

Strain history: <- M. Munusamy, National University of Singapore, Temasek Life Scs. Lab.; L9-479

NCBI tax ID(s): 1166078 (species)

SI-ID 398101

DSM 25024

Other strains from Aureimonas phyllosphaerae

A. phyllosphaerae L9-753, DSM 25026, KACC 16231 (type strain)
A. phyllosphaerae L7-456, DSM 25023, KACC 16229

Section

Aureimonas phyllosphaerae L9-479 is a mesophilic, Gram-negative bacterium that was isolated from surface-sterilized leaf tissues of Jatropha curcas L..

Gram-negative
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Hyphomicrobiales*
	Family	*Aurantimonadaceae*
	Genus	*Aureimonas*
	Species	**Aureimonas phyllosphaerae**
	Full Scientific Name (LPSN)	Aureimonas phyllosphaerae Madhaiyan et al. 2013

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %99.953

[Ref.: #21226]

Incubation period

2-3 days

Information on culture and growth conditions Culture and growth conditions

[Ref.: #21226]

Culture medium

AURANTIMONAS MEDIUM (DSMZ Medium 1346)

[Ref.: #21226]

Culture medium growth

[Ref.: #21226]

Culture medium link

Medium recipe at MediaDive

[Ref.: #21226]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #21226]			growth	28 °C

[Ref.: #21226]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.996

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #21226]	Sample type/isolated from	surface-sterilized leaf tissues of Jatropha curcas L.
[Ref.: #21226]	Host species	Jatropha curcas
[Ref.: #21226]	Geographic location (country and/or sea, region)	Lim Chu Kang, Agrotechnology Experimental Station
[Ref.: #21226]	Country	Singapore
[Ref.: #21226]	Country ISO 3 Code	SGP
[Ref.: #21226]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Host	#Plants	#Shrub (Scrub)
#Host Body-Site	#Plant	#Leaf (Phyllosphere)
#Host Body-Site	#Plant	#Sterilized plant part

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence JQ346804 (>99% sequence identity) for Aureimonas phyllosphaerae subclade from Microbeatlas

Aquatic Samples	1215
Soil Samples	2491
Animal Samples	4285
Plant Samples	4403
Total Samples	12394

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #21226]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #21226]	Aureimonas phyllosphaerae strain L9-479 16S ribosomal RNA gene, partial sequence	JQ346804	1435	ENA	1166078 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Aureimonas phyllosphaerae DSM 25024	GCA_014196405	scaffold	GenBank	1166078 tax ID	*
[Ref.: #66792]	Aureimonas phyllosphaerae strain DSM 25024	1166078.5	wgs	PATRIC	1166078 tax ID	*
[Ref.: #66792]	Aureimonas phyllosphaerae DSM 25024	2829876606	draft	JGI IMG/M	1166078 tax ID	*

[Ref.: #21226]

GC-content

65.1 mol%

high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Aureimonas phyllosphaerae DSM 25024 NCBI: GCA_014196405.1
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Aureimonas phyllosphaerae DSM 25024 NCBI: GCA_014196405.1
[Ref.: #69480]	flagellated	no	76.682	no
[Ref.: #69480]	gram-positive	no	97.244	no
[Ref.: #69480]	anaerobic	no	97.198	no
[Ref.: #69480]	aerobic	yes	91.287	no
[Ref.: #69480]	halophile	no	87.677	no
[Ref.: #69480]	spore-forming	no	94.644	no
[Ref.: #69480]	glucose-util	yes	91.002	no
[Ref.: #69480]	thermophile	no	99.134	yes
[Ref.: #69480]	motile	yes	79.764	no
[Ref.: #69480]	glucose-ferment	no	89.824	no

Availability in culture collections External links

[Ref.: #21226]

Culture collection no.

DSM 25024, KACC 16228

[Ref.: #87675]

SI-ID 398101

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Aureimonas jatrophae sp. nov. and Aureimonas phyllosphaerae sp. nov., leaf-associated bacteria isolated from Jatropha curcas L.	Madhaiyan M, Hu CJ, Jegan Roy J, Kim SJ, Weon HY, Kwon SW, Ji L	Int J Syst Evol Microbiol	10.1099/ijs.0.041020-0	2012	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#21226

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 25024

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#87675

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID398101.1 )

* These data were automatically processed and therefore are not curated

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Aureimonas phyllosphaerae DSM 25024

Aureimonas phyllosphaerae DSM 25024

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