Name: Effusibacillus consociatus DSM 28459
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 23552

Type strain:

Species: Effusibacillus consociatus

Culture col. no.: DSM 28459, CCM 8439, CCUG 53762

Strain history: <- CCUG; CCUG 53762 <- T. Ahlqvist, PHLS, Karlstad, Sweden

NCBI tax ID(s): 1117041 (species)

SI-ID 303465

CCUG 53762, CCM 8439, DSM 28459

Section

Effusibacillus consociatus DSM 28459 is an aerobe, spore-forming, mesophilic bacterium that was isolated from human blood.

Gram-positive
rod-shaped
spore-forming
aerobe
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Alicyclobacillaceae*
	Genus	*Effusibacillus*
	Species	**Effusibacillus consociatus**
	Full Scientific Name (LPSN)	Effusibacillus consociatus (Glaeser et al. 2013) Watanabe et al. 2014

Synonym

Alicyclobacillus consociatus

Information on morphological and physiological properties Morphology

[Ref.: #30946]	Gram stain	positive

[Ref.: #30946]	Cell length	3.5 µm

[Ref.: #30946]	Cell width	0.9 µm

[Ref.: #30946]	Cell shape	rod-shaped

[Ref.: #30946]	Motility	no

[Ref.: #60004]

Incubation period

2 days

[Ref.: #30946]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

[Ref.: #20276]

Culture medium

R2A MEDIUM (DSMZ Medium 830)

[Ref.: #20276]

Culture medium growth

[Ref.: #20276]

Culture medium link

Medium recipe at MediaDive

[Ref.: #20276]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #20276]	growth	30 °C
[Ref.: #30946]	growth	15-45 °C
[Ref.: #30946]	optimum	30 °C
[Ref.: #60004]	growth	30-37 °C

[Ref.: #20276]	Temperature range	mesophilic
[Ref.: #30946]	Temperature range	mesophilic
[Ref.: #60004]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #30946]			optimum	6.5
[Ref.: #30946]			growth	5.5-10.5

Information on physiology and metabolism Physiology and metabolism

[Ref.: #30946]	Oxygen tolerance	aerobe
[Ref.: #60004]	Oxygen tolerance	aerobe

[Ref.: #30946]

Ability of spore formation

yes

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #30946]		NaCl		growth	01-02	%

[Ref.: #30946]

Observation

aggregates in clumps

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #30946]	cellobiose ChEBI	+	carbon source
[Ref.: #30946]	fructose ChEBI	+	carbon source
[Ref.: #30946]	galactose ChEBI	+	carbon source
[Ref.: #30946]	gluconate ChEBI	+	carbon source
[Ref.: #30946]	glucose ChEBI	+	carbon source
[Ref.: #30946]	malate ChEBI	+	carbon source
[Ref.: #30946]	maltose ChEBI	+	carbon source
[Ref.: #30946]	mannitol ChEBI	+	carbon source
[Ref.: #30946]	mannose ChEBI	+	carbon source
[Ref.: #30946]	N-acetylglucosamine ChEBI	+	carbon source
[Ref.: #30946]	rhamnose ChEBI	+	carbon source
[Ref.: #30946]	salicin ChEBI	+	carbon source
[Ref.: #30946]	sucrose ChEBI	+	carbon source
[Ref.: #30946]	trehalose ChEBI	+	carbon source
[Ref.: #30946]	xylose ChEBI	+	carbon source
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #30946]		hydrogen sulfide ChEBI	yes

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #30946]		cytochrome oxidase	+	1.9.3.1

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #30946]	Sample type/isolated from	human blood

[Ref.: #60004]	Sample type/isolated from	Human blood,51-yr-old woman,fever
[Ref.: #60004]	Sampling date	2006
[Ref.: #60004]	Country	Sweden
[Ref.: #60004]	Country ISO 3 Code	SWE
[Ref.: #60004]	Continent	Europe

[Ref.: #20276]	Sample type/isolated from	blood sample of a 51-year-old woman
[Ref.: #20276]	Country	Sweden
[Ref.: #20276]	Country ISO 3 Code	SWE
[Ref.: #20276]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Host	#Human	-
#Host Body Product	#Fluids	#Blood

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #20276]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20276]	Effusibacillus consociatus partial 16S rRNA gene, type strain CCUG 53762T	HE613268	1464	ENA	1117041 tax ID

[Ref.: #30946]	GC-content	47 mol%
[Ref.: #20276]	GC-content	47 mol%	fluorimetric

Availability in culture collections External links

[Ref.: #20276]

Culture collection no.

DSM 28459, CCM 8439, CCUG 53762

[Ref.: #87646]

SI-ID 303465

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Proposal of Effusibacillus lacus gen. nov., sp. nov., and reclassification of Alicyclobacillus pohliae as Effusibacillus pohliae comb. nov. and Alicyclobacillus consociatus as Effusibacillus consociatus comb. nov.	Watanabe M, Kojima H, Fukui M	Int J Syst Evol Microbiol	10.1099/ijs.0.055814-0	2014	*
Phylogeny	Alicyclobacillus consociatus sp. nov., isolated from a human clinical specimen.	Glaeser SP, Falsen E, Martin K, Kampfer P	Int J Syst Evol Microbiol	10.1099/ijs.0.048173-0	2013	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20276

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 28459

#30946

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27276 (see below)

#60004 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 53762

#87646

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID303465.1 )

#27276

IJSEM 3623 2013 ( DOI 10.1099/ijs.0.048173-0 , PubMed 23606481 )

* These data were automatically processed and therefore are not curated

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