Effusibacillus consociatus (DSM 28459, CCM 8439, CCUG 53762)

Name: Effusibacillus consociatus (DSM 28459, CCM 8439, CCUG 53762)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 23552

Type strain

Culture col. no. DSM 28459 CCM 8439 CCUG 53762

NCBI tax ID(s) 1117041

Special Collections DSMZ CCUG Literature strains

History DSMZ <- CCUG; CCUG 53762 <- T. Ahlqvist, PHLS, Karlstad, Sweden

Links

Effusibacillus consociatus DSM 28459 is an aerobe, spore-forming, Gram-positive bacterium that was isolated from human blood.

spore-forming Gram-positive rod-shaped aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 303465

CCUG 53762,CCM 8439,DSM 28459

@ref 20215

Last LPSN update 2026-05-29 08:30:27

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Alicyclobacillaceae

Genus Effusibacillus

Species Effusibacillus consociatus

Full scientific name Effusibacillus consociatus (Glaeser et al. 2013) Watanabe et al. 2014

Synonyms (1)

Alicyclobacillus consociatus

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Motility
30946	positive	3.5 µm	0.9 µm	rod-shaped

Colony morphology

60004

Incubation period2 days

Pigmentation

30946

Productionyes

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
20276	R2A MEDIUM (DSMZ Medium 830)		Medium recipe at MediaDive	Name: R2A MEDIUM (DSMZ Medium 830) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
20276	positive	growth	30
30946	positive	growth	15-45
30946	positive	optimum	30
60004	positive	growth	30-37

Culture pH

@ref	Ability	Type	PH	PH range
30946	positive	optimum	6.5
30946	positive	growth	5.5-10.5	alkaliphile

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
30946	aerobe
60004	aerobe
125439	facultative anaerobe	94.453

Spore formation

30946

Spore formationyes

Halophily

@ref	Salt	Growth	Tested relation	Concentration
30946	NaCl	positive	growth	01-02 %

Observation

30946

Observationaggregates in clumps

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
30946	17057 ChEBI	cellobiose	+	carbon source
30946	28757 ChEBI	fructose	+	carbon source
30946	28260 ChEBI	galactose	+	carbon source
30946	24265 ChEBI	gluconate	+	carbon source
30946	17234 ChEBI	glucose	+	carbon source
30946	25115 ChEBI	malate	+	carbon source
30946	17306 ChEBI	maltose	+	carbon source
30946	29864 ChEBI	mannitol	+	carbon source
30946	37684 ChEBI	mannose	+	carbon source
30946	506227 ChEBI	N-acetylglucosamine	+	carbon source
30946	26546 ChEBI	rhamnose	+	carbon source
30946	17814 ChEBI	salicin	+	carbon source
30946	17992 ChEBI	sucrose	+	carbon source
30946	27082 ChEBI	trehalose	+	carbon source
30946	18222 ChEBI	xylose	+	carbon source

Metabolite production

@ref	Chebi-ID	Metabolite	Production
30946	16136 ChEBI	hydrogen sulfide

Enzymes

@ref	Value	Activity	Ec
30946	cytochrome oxidase	+	1.9.3.1

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Human	-
#Host Body Product	#Fluids	#Blood

Isolation

@ref	Sample type	Host species	Sampling date	Country	Country ISO 3 Code	Continent
30946	human blood	Homo sapiens
60004	Human blood,51-yr-old woman,fever	Homo sapiens	2006	Sweden	SWE	Europe
20276	blood sample of a 51-year-old woman	Homo sapiens		Sweden	SWE	Europe

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
20276	1	Risk group (German classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	NCBI tax ID	Score
124043	ASM4265292v1 assembly for Effusibacillus consociatus CCUG 53762	scaffold	GCA_042652925	1117041	32.41

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20276	Effusibacillus consociatus partial 16S rRNA gene, type strain CCUG 53762T	HE613268	1464		1117041

GC content

@ref	GC-content (mol%)	Method
30946	47
20276	47	fluorimetric

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM4265292v1 assembly for Effusibacillus consociatus CCUG 53762
NCBI: GCA_042652925

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	94.45	no
125439	gram_stain	BacteriaNetⓘ	variable	72.63	no
125439	spore_formation	BacteriaNetⓘ	yes	82.39	no
125439	motility	BacteriaNetⓘ	yes	78.46	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Effusibacillus dendaii sp. nov. isolated from farm soil.	Konishi T, Tamura T, Tobita T, Sakai S, Matsuda N, Kawasaki H.	Arch Microbiol	10.1007/s00203-021-02470-9	2021
Phylogeny	Proposal of Effusibacillus lacus gen. nov., sp. nov., and reclassification of Alicyclobacillus pohliae as Effusibacillus pohliae comb. nov. and Alicyclobacillus consociatus as Effusibacillus consociatus comb. nov.	Watanabe M, Kojima H, Fukui M	Int J Syst Evol Microbiol	10.1099/ijs.0.055814-0	2014
Phylogeny	Alicyclobacillus consociatus sp. nov., isolated from a human clinical specimen.	Glaeser SP, Falsen E, Martin K, Kampfer P	Int J Syst Evol Microbiol	10.1099/ijs.0.048173-0	2013

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20276	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 28459
#27276	IJSEM 3623 2013 ( DOI 10.1099/ijs.0.048173-0 , PubMed 23606481 )
#30946	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27276
#60004	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 53762
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Effusibacillus consociatus (DSM 28459, CCM 8439, CCUG 53762)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Pigmentation

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Observation

Metabolite utilization

Metabolite production

Enzymes

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_042652925

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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