Cellulomonas flavigena 134 is an aerobe, Gram-positive, rod-shaped bacterium of the family Cellulomonadaceae.
Gram-positive rod-shaped aerobe genome sequence 16S sequence Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Actinomycetota |
| Class Actinomycetes |
| Order Micrococcales |
| Family Cellulomonadaceae |
| Genus Cellulomonas |
| Species Cellulomonas flavigena |
| Full scientific name Cellulomonas flavigena (Kellerman and McBeth 1912) Bergey et al. 1923 (Approved Lists 1980) |
| Synonyms (1) |
| @ref | Colony color | Incubation period | Medium used | Colony size | Hemolysis ability | |
|---|---|---|---|---|---|---|
| 18620 | Ivory (1014) | 10-14 days | ISP 2 | |||
| 18620 | Zinc yellow (1018) | 10-14 days | ISP 3 | |||
| 18620 | Daffodil yellow (1007) | 10-14 days | ISP 4 | |||
| 18620 | Zinc yellow (1018) | 10-14 days | ISP 5 | |||
| 18620 | Colorless | 10-14 days | ISP 6 | |||
| 18620 | Colorless | 10-14 days | ISP 7 | |||
| 43361 | yellow | yeast extract-glucose agar | 5 mm | |||
| 119377 | 1 |
| @ref: | 66793 |
| multimedia content: | EM_DSM_20109_1.jpg |
| multimedia.multimedia content: | EM_DSM_20109_1.jpg |
| caption: | electron microscopic image |
| intellectual property rights: | © HZI/Manfred Rohde |
| manual_annotation: | 1 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 18620 | ISP 2 | Name: ISP 2 / Yeast Malt Agar (5265); 5265 Composition Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l Agar 15.0 g/l Preparation: Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.0 Usage: Maintenance and Taxonomy Organisms: All Actinomycetes | |||
| 18620 | ISP 3 | Name: ISP 3; 5315 Composition Dog oat flakes 20.0 g/l Trace element solution (5314) 2.5 ml/l Agar 18.0 g/l Preparation: Oat flakes are cooked for 20 minutes, trace element solution and agar are added (in the case of non rolled oat flakes the suspension has to bee filtrated). Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.8 Usage: Maintenance and taxonomy (e.g. SEM As liquid medium for metabolite production) Organisms: All Actinomycetes Trace element solution 5314 Name: Trace element solution 5314; 5314 Composition CaCl2 x H2O 3.0 g/l Fe-III-citrate 1.0 g/l MnSO4 0.2 g/l ZnCl2 0.1 g/l CuSO4 x 5 H2O 0.025 g/l Sodium tetra borate 0.2 g/l CoCl2 x 6 H2O 0.004 g/l Sodium molybdate 0.01 g/l Preparation: Use double destillated water. Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Trace element solution for different media Organisms: | |||
| 18620 | ISP 4 | Name: ISP 4; DSM 547 Solution I: Difco soluble starch, 10.0 g. Make a paste of the starch with a small amount of cold distilled water and bring to a volume of 500 ml. Solution II: CaCO3 2.0 g K2HPO4 (anhydrous) 1.0 g MgSO4 x 7 H2O 1.0 g NaCl 1.0 g (NH4)2SO4 2.0 g Distilled water 500.0 ml Trace salt solution (see below) 1.0 ml The pH should be between 7.0 and 7.4. Do not adjust if it is within this range. Mix solutions I and II together. Add 20.0 g agar. Liquify agar by steaming at 100°C for 10 to 20 min. Trace element solution: FeSO4 x 7 H2O 0.1 g MnCl2 x 4 H2O 0.1 g ZnSO4 x 7 H2O 0.1 g Distilled water 100.0 ml | |||
| 18620 | ISP 5 | Name: ISP 5 (5323) Composition L-Asparagine 1.0 g/l Glycerol 10.0 g/l K2HPO4 1.0 g/l Salt solution (see preparation) 1.0 ml/l Agar 20.0 g/l Preparation: Salt solution 1.0 g FeSO4 x 7 H2O 1.0 g MnCl2 x 4 H2O 1.0 g ZNSO4 x 7 H2O in 100 ml water Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.2 Usage: Maintenance and taxonomy Organisms: All Actinomycetes | |||
| 18620 | ISP 6 | Name: ISP 6 (5318) Composition Peptone 15.0 g/l Proteose peptose 5.0 g/l Ferric ammonium citrate 0.5 g/l Sodium glycerophosphate 1.0 g/l Sodium thiosulfate 0.08 g/l Yeast extract 1.0 g/l Agar 15.0 g/l Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Production of melanoid pigments Organisms: All Actinomycetes | |||
| 18620 | ISP 7 | Name: ISP 7 (5322) Composition Glycerol 15.0 g/l L-Tyrosine 0.5 g/l L-Asparagine 1.0 g/l K2HPO4 0.5 g/l NaCl 0.5 g/l FeSO4 x 7 H2O 0.01 g/l Trace element solution 5343 1.0 ml/l Agar 20.0 Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.3 Usage: Production of melanoid pigments Organisms: All Actinomycetes | |||
| 8534 | CORYNEBACTERIUM AGAR (DSMZ Medium 53) | Medium recipe at MediaDive | Name: CORYNEBACTERIUM AGAR (DSMZ Medium 53) Composition: Agar 15.0 g/l Casein peptone 10.0 g/l NaCl 5.0 g/l Glucose 5.0 g/l Yeast extract 5.0 g/l Distilled water | ||
| 37348 | MEDIUM 3 - Columbia agar | Columbia agar (39.000 g);distilled water (1000.000 ml) | |||
| 43361 | yeast extract-glucose agar | ||||
| 43361 | yeast glucose agar | peptone 1%, yeast extract 0.5%, glucose 0.5%, agar 1% | |||
| 119377 | CIP Medium 3 | Medium recipe at CIP |
| @ref | Ability | Type | PH | |
|---|---|---|---|---|
| 43361 | positive | optimum | 7 |
| @ref | Murein short key | Type | |
|---|---|---|---|
| 8534 | A21.04 | A4ß L-Orn-D-Asp |
| 67770 | Observationquinones: MK-9(H4) |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 43361 | 16004 ChEBI | (R)-lactate | - | assimilation | |
| 43361 | 16651 ChEBI | (S)-lactate | - | assimilation | |
| 43361 | 30089 ChEBI | acetate | + | assimilation | |
| 68371 | 27613 ChEBI | amygdalin | - | builds acid from | from API 50CH acid |
| 68371 | 18305 ChEBI | arbutin | - | builds acid from | from API 50CH acid |
| 68368 | 29016 ChEBI | arginine | - | hydrolysis | from API 20E |
| 119377 | 16947 ChEBI | citrate | - | carbon source | |
| 68368 | 16947 ChEBI | citrate | - | assimilation | from API 20E |
| 68371 | 17108 ChEBI | D-arabinose | - | builds acid from | from API 50CH acid |
| 68371 | 18333 ChEBI | D-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 15824 ChEBI | D-fructose | + | builds acid from | from API 50CH acid |
| 68371 | 28847 ChEBI | D-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 12936 ChEBI | D-galactose | + | builds acid from | from API 50CH acid |
| 68379 | 17634 ChEBI | D-glucose | - | fermentation | from API Coryne |
| 68371 | 17634 ChEBI | D-glucose | + | builds acid from | from API 50CH acid |
| 68371 | 62318 ChEBI | D-lyxose | + | builds acid from | from API 50CH acid |
| 68379 | 16899 ChEBI | D-mannitol | + | fermentation | from API Coryne |
| 68371 | 16899 ChEBI | D-mannitol | - | builds acid from | from API 50CH acid |
| 68379 | 16988 ChEBI | D-ribose | + | fermentation | from API Coryne |
| 68371 | 17924 ChEBI | D-sorbitol | - | builds acid from | from API 50CH acid |
| 68371 | 16443 ChEBI | D-tagatose | - | builds acid from | from API 50CH acid |
| 68379 | 65327 ChEBI | D-xylose | - | fermentation | from API Coryne |
| 68371 | 65327 ChEBI | D-xylose | + | builds acid from | from API 50CH acid |
| 68371 | 17113 ChEBI | erythritol | - | builds acid from | from API 50CH acid |
| 68379 | 4853 ChEBI | esculin | + | hydrolysis | from API Coryne |
| 119377 | 4853 ChEBI | esculin | + | hydrolysis | |
| 68371 | 4853 ChEBI | esculin | + | builds acid from | from API 50CH acid |
| 68371 | 16813 ChEBI | galactitol | - | builds acid from | from API 50CH acid |
| 68379 | 5291 ChEBI | gelatin | + | hydrolysis | from API Coryne |
| 68368 | 5291 ChEBI | gelatin | - | hydrolysis | from API 20E |
| 68371 | 28066 ChEBI | gentiobiose | + | builds acid from | from API 50CH acid |
| 68371 | 24265 ChEBI | gluconate | - | builds acid from | from API 50CH acid |
| 43361 | 17234 ChEBI | glucose | + | assimilation | |
| 68371 | 17754 ChEBI | glycerol | + | builds acid from | from API 50CH acid |
| 68379 | 28087 ChEBI | glycogen | - | fermentation | from API Coryne |
| 68371 | 28087 ChEBI | glycogen | + | builds acid from | from API 50CH acid |
| 119377 | 606565 ChEBI | hippurate | - | hydrolysis | |
| 68371 | 30849 ChEBI | L-arabinose | + | builds acid from | from API 50CH acid |
| 68371 | 18403 ChEBI | L-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 18287 ChEBI | L-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 62345 ChEBI | L-rhamnose | - | builds acid from | from API 50CH acid |
| 68371 | 17266 ChEBI | L-sorbose | - | builds acid from | from API 50CH acid |
| 68371 | 65328 ChEBI | L-xylose | - | builds acid from | from API 50CH acid |
| 68379 | 17716 ChEBI | lactose | + | fermentation | from API Coryne |
| 68368 | 25094 ChEBI | lysine | - | degradation | from API 20E |
| 68379 | 17306 ChEBI | maltose | + | fermentation | from API Coryne |
| 68371 | 17306 ChEBI | maltose | + | builds acid from | from API 50CH acid |
| 68371 | 6731 ChEBI | melezitose | - | builds acid from | from API 50CH acid |
| 68371 | 28053 ChEBI | melibiose | - | builds acid from | from API 50CH acid |
| 68371 | 320061 ChEBI | methyl alpha-D-glucopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 43943 ChEBI | methyl alpha-D-mannoside | - | builds acid from | from API 50CH acid |
| 68371 | 17268 ChEBI | myo-inositol | - | builds acid from | from API 50CH acid |
| 68371 | 59640 ChEBI | N-acetylglucosamine | - | builds acid from | from API 50CH acid |
| 43361 | 17632 ChEBI | nitrate | + | reduction | |
| 68379 | 17632 ChEBI | nitrate | - | reduction | from API Coryne |
| 119377 | 17632 ChEBI | nitrate | + | reduction | |
| 119377 | 17632 ChEBI | nitrate | - | respiration | |
| 119377 | 16301 ChEBI | nitrite | - | reduction | |
| 68368 | 18257 ChEBI | ornithine | - | degradation | from API 20E |
| 68371 | 0 ChEBI | Potassium 2-ketogluconate | - | builds acid from | from API 50CH acid |
| 68371 | 0 ChEBI | Potassium 5-ketogluconate | + | builds acid from | from API 50CH acid |
| 43361 | 16634 ChEBI | raffinose | - | assimilation | |
| 68371 | 15963 ChEBI | ribitol | - | builds acid from | from API 50CH acid |
| 43361 | 33942 ChEBI | ribose | + | assimilation | |
| 68371 | 28017 ChEBI | starch | + | builds acid from | from API 50CH acid |
| 68379 | 17992 ChEBI | sucrose | - | fermentation | from API Coryne |
| 68371 | 17992 ChEBI | sucrose | + | builds acid from | from API 50CH acid |
| 68368 | 27897 ChEBI | tryptophan | - | energy source | from API 20E |
| 68371 | 32528 ChEBI | turanose | + | builds acid from | from API 50CH acid |
| 68379 | 16199 ChEBI | urea | + | hydrolysis | from API Coryne |
| 68368 | 16199 ChEBI | urea | - | hydrolysis | from API 20E |
| 68371 | 17151 ChEBI | xylitol | - | builds acid from | from API 50CH acid |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 119377 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 68382 | alkaline phosphatase | - | 3.1.3.1 | from API zym |
| 68379 | alkaline phosphatase | - | 3.1.3.1 | from API Coryne |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-glucosidase | + | 3.2.1.20 | from API zym |
| 68379 | alpha-glucosidase | + | 3.2.1.20 | from API Coryne |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 119377 | amylase | + | ||
| 68368 | arginine dihydrolase | - | 3.5.3.6 | from API 20E |
| 68382 | beta-galactosidase | + | 3.2.1.23 | from API zym |
| 119377 | beta-galactosidase | + | 3.2.1.23 | |
| 68379 | beta-galactosidase | + | 3.2.1.23 | from API Coryne |
| 68368 | beta-galactosidase | + | 3.2.1.23 | from API 20E |
| 68382 | beta-glucosidase | + | 3.2.1.21 | from API zym |
| 68379 | beta-glucosidase | + | 3.2.1.21 | from API Coryne |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 68379 | beta-glucuronidase | + | 3.2.1.31 | from API Coryne |
| 119377 | caseinase | + | 3.4.21.50 | |
| 119377 | catalase | + | 1.11.1.6 | |
| 119377 | DNase | + | ||
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 119377 | gamma-glutamyltransferase | - | 2.3.2.2 | |
| 119377 | gelatinase | + | ||
| 68379 | gelatinase | + | from API Coryne | |
| 68368 | gelatinase | - | from API 20E | |
| 119377 | lecithinase | - | ||
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 119377 | lipase | - | ||
| 68382 | lipase (C 14) | - | from API zym | |
| 119377 | lysine decarboxylase | - | 4.1.1.18 | |
| 68368 | lysine decarboxylase | - | 4.1.1.18 | from API 20E |
| 68382 | N-acetyl-beta-glucosaminidase | + | 3.2.1.52 | from API zym |
| 68379 | N-acetyl-beta-glucosaminidase | + | 3.2.1.52 | from API Coryne |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 119377 | ornithine decarboxylase | - | 4.1.1.17 | |
| 68368 | ornithine decarboxylase | - | 4.1.1.17 | from API 20E |
| 119377 | oxidase | - | ||
| 119377 | phenylalanine ammonia-lyase | - | 4.3.1.24 | |
| 119377 | protease | + | ||
| 68379 | pyrazinamidase | - | 3.5.1.B15 | from API Coryne |
| 68379 | pyrrolidonyl arylamidase | + | 3.4.19.3 | from API Coryne |
| 119377 | tryptophan deaminase | - | ||
| 68368 | tryptophan deaminase | - | 4.1.99.1 | from API 20E |
| 119377 | tween esterase | - | ||
| 119377 | urease | - | 3.5.1.5 | |
| 68379 | urease | + | 3.5.1.5 | from API Coryne |
| 68368 | urease | - | 3.5.1.5 | from API 20E |
| @ref | pathway | enzyme coverage | annotated reactions | external links | |
|---|---|---|---|---|---|
| 66794 | cellulose degradation | 100 | 5 of 5 | ||
| 66794 | acetate fermentation | 100 | 4 of 4 | ||
| 66794 | lipoate biosynthesis | 100 | 5 of 5 | ||
| 66794 | threonine metabolism | 100 | 10 of 10 | ||
| 66794 | starch degradation | 100 | 10 of 10 | ||
| 66794 | cardiolipin biosynthesis | 100 | 7 of 7 | ||
| 66794 | coenzyme A metabolism | 100 | 4 of 4 | ||
| 66794 | formaldehyde oxidation | 100 | 3 of 3 | ||
| 66794 | glycogen metabolism | 100 | 5 of 5 | ||
| 66794 | vitamin K metabolism | 100 | 5 of 5 | ||
| 66794 | cis-vaccenate biosynthesis | 100 | 2 of 2 | ||
| 66794 | adipate degradation | 100 | 2 of 2 | ||
| 66794 | palmitate biosynthesis | 100 | 22 of 22 | ||
| 66794 | teichoic acid biosynthesis | 100 | 1 of 1 | ||
| 66794 | denitrification | 100 | 2 of 2 | ||
| 66794 | folate polyglutamylation | 100 | 1 of 1 | ||
| 66794 | aerobactin biosynthesis | 100 | 1 of 1 | ||
| 66794 | anapleurotic synthesis of oxalacetate | 100 | 1 of 1 | ||
| 66794 | ppGpp biosynthesis | 100 | 4 of 4 | ||
| 66794 | methylglyoxal degradation | 100 | 5 of 5 | ||
| 66794 | suberin monomers biosynthesis | 100 | 2 of 2 | ||
| 66794 | UDP-GlcNAc biosynthesis | 100 | 3 of 3 | ||
| 66794 | CDP-diacylglycerol biosynthesis | 100 | 2 of 2 | ||
| 66794 | NAD metabolism | 94.44 | 17 of 18 | ||
| 66794 | heme metabolism | 92.86 | 13 of 14 | ||
| 66794 | metabolism of disaccharids | 90.91 | 10 of 11 | ||
| 66794 | Entner Doudoroff pathway | 90 | 9 of 10 | ||
| 66794 | molybdenum cofactor biosynthesis | 88.89 | 8 of 9 | ||
| 66794 | valine metabolism | 88.89 | 8 of 9 | ||
| 66794 | chorismate metabolism | 88.89 | 8 of 9 | ||
| 66794 | isoleucine metabolism | 87.5 | 7 of 8 | ||
| 66794 | gluconeogenesis | 87.5 | 7 of 8 | ||
| 66794 | C4 and CAM-carbon fixation | 87.5 | 7 of 8 | ||
| 66794 | peptidoglycan biosynthesis | 86.67 | 13 of 15 | ||
| 66794 | flavin biosynthesis | 86.67 | 13 of 15 | ||
| 66794 | photosynthesis | 85.71 | 12 of 14 | ||
| 66794 | reductive acetyl coenzyme A pathway | 85.71 | 6 of 7 | ||
| 66794 | vitamin B1 metabolism | 84.62 | 11 of 13 | ||
| 66794 | glycolate and glyoxylate degradation | 83.33 | 5 of 6 | ||
| 66794 | pentose phosphate pathway | 81.82 | 9 of 11 | ||
| 66794 | pyrimidine metabolism | 80 | 36 of 45 | ||
| 66794 | alanine metabolism | 79.31 | 23 of 29 | ||
| 66794 | glutamate and glutamine metabolism | 78.57 | 22 of 28 | ||
| 66794 | serine metabolism | 77.78 | 7 of 9 | ||
| 66794 | CO2 fixation in Crenarchaeota | 77.78 | 7 of 9 | ||
| 66794 | allantoin degradation | 77.78 | 7 of 9 | ||
| 66794 | purine metabolism | 77.66 | 73 of 94 | ||
| 66794 | phenylalanine metabolism | 76.92 | 10 of 13 | ||
| 66794 | ketogluconate metabolism | 75 | 6 of 8 | ||
| 66794 | glycogen biosynthesis | 75 | 3 of 4 | ||
| 66794 | sulfopterin metabolism | 75 | 3 of 4 | ||
| 66794 | 6-hydroxymethyl-dihydropterin diphosphate biosynthesis | 75 | 6 of 8 | ||
| 66794 | dTDPLrhamnose biosynthesis | 75 | 6 of 8 | ||
| 66794 | d-xylose degradation | 72.73 | 8 of 11 | ||
| 66794 | proline metabolism | 72.73 | 8 of 11 | ||
| 66794 | tetrahydrofolate metabolism | 71.43 | 10 of 14 | ||
| 66794 | non-pathway related | 71.05 | 27 of 38 | ||
| 66794 | glycolysis | 70.59 | 12 of 17 | ||
| 66794 | leucine metabolism | 69.23 | 9 of 13 | ||
| 66794 | urea cycle | 69.23 | 9 of 13 | ||
| 66794 | aspartate and asparagine metabolism | 66.67 | 6 of 9 | ||
| 66794 | octane oxidation | 66.67 | 2 of 3 | ||
| 66794 | acetyl CoA biosynthesis | 66.67 | 2 of 3 | ||
| 66794 | sulfoquinovose degradation | 66.67 | 2 of 3 | ||
| 66794 | cyanate degradation | 66.67 | 2 of 3 | ||
| 66794 | L-lactaldehyde degradation | 66.67 | 2 of 3 | ||
| 66794 | enterobactin biosynthesis | 66.67 | 2 of 3 | ||
| 66794 | d-mannose degradation | 66.67 | 6 of 9 | ||
| 66794 | acetoin degradation | 66.67 | 2 of 3 | ||
| 66794 | oxidative phosphorylation | 65.93 | 60 of 91 | ||
| 66794 | isoprenoid biosynthesis | 65.38 | 17 of 26 | ||
| 66794 | citric acid cycle | 64.29 | 9 of 14 | ||
| 66794 | glutathione metabolism | 64.29 | 9 of 14 | ||
| 66794 | degradation of sugar alcohols | 62.5 | 10 of 16 | ||
| 66794 | histidine metabolism | 62.07 | 18 of 29 | ||
| 66794 | lipid metabolism | 61.29 | 19 of 31 | ||
| 66794 | cysteine metabolism | 61.11 | 11 of 18 | ||
| 66794 | degradation of pentoses | 60.71 | 17 of 28 | ||
| 66794 | factor 420 biosynthesis | 60 | 3 of 5 | ||
| 66794 | propionate fermentation | 60 | 6 of 10 | ||
| 66794 | phenylacetate degradation (aerobic) | 60 | 3 of 5 | ||
| 66794 | tryptophan metabolism | 57.89 | 22 of 38 | ||
| 66794 | methionine metabolism | 57.69 | 15 of 26 | ||
| 66794 | ubiquinone biosynthesis | 57.14 | 4 of 7 | ||
| 66794 | degradation of sugar acids | 56 | 14 of 25 | ||
| 66794 | nitrate assimilation | 55.56 | 5 of 9 | ||
| 66794 | sulfate reduction | 53.85 | 7 of 13 | ||
| 66794 | pantothenate biosynthesis | 50 | 3 of 6 | ||
| 66794 | grixazone biosynthesis | 50 | 1 of 2 | ||
| 66794 | CMP-KDO biosynthesis | 50 | 2 of 4 | ||
| 66794 | lysine metabolism | 50 | 21 of 42 | ||
| 66794 | arginine metabolism | 50 | 12 of 24 | ||
| 66794 | tyrosine metabolism | 50 | 7 of 14 | ||
| 66794 | phenylmercury acetate degradation | 50 | 1 of 2 | ||
| 66794 | mannosylglycerate biosynthesis | 50 | 1 of 2 | ||
| 66794 | carotenoid biosynthesis | 50 | 11 of 22 | ||
| 66794 | butanoate fermentation | 50 | 2 of 4 | ||
| 66794 | ethanol fermentation | 50 | 1 of 2 | ||
| 66794 | 4-hydroxyphenylacetate degradation | 50 | 5 of 10 | ||
| 66794 | glycine metabolism | 50 | 5 of 10 | ||
| 66794 | kanosamine biosynthesis II | 50 | 1 of 2 | ||
| 66794 | 3-phenylpropionate degradation | 46.67 | 7 of 15 | ||
| 66794 | vitamin B6 metabolism | 45.45 | 5 of 11 | ||
| 66794 | degradation of hexoses | 44.44 | 8 of 18 | ||
| 66794 | lipid A biosynthesis | 44.44 | 4 of 9 | ||
| 66794 | androgen and estrogen metabolism | 43.75 | 7 of 16 | ||
| 66794 | propanol degradation | 42.86 | 3 of 7 | ||
| 66794 | degradation of aromatic, nitrogen containing compounds | 41.67 | 5 of 12 | ||
| 66794 | coenzyme M biosynthesis | 40 | 4 of 10 | ||
| 66794 | bacilysin biosynthesis | 40 | 2 of 5 | ||
| 66794 | myo-inositol biosynthesis | 40 | 4 of 10 | ||
| 66794 | arachidonate biosynthesis | 40 | 2 of 5 | ||
| 66794 | dolichyl-diphosphooligosaccharide biosynthesis | 36.36 | 4 of 11 | ||
| 66794 | ascorbate metabolism | 36.36 | 8 of 22 | ||
| 66794 | polyamine pathway | 34.78 | 8 of 23 | ||
| 66794 | selenocysteine biosynthesis | 33.33 | 2 of 6 | ||
| 66794 | (5R)-carbapenem carboxylate biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | sphingosine metabolism | 33.33 | 2 of 6 | ||
| 66794 | IAA biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | phosphatidylethanolamine bioynthesis | 30.77 | 4 of 13 | ||
| 66794 | phenol degradation | 30 | 6 of 20 | ||
| 66794 | benzoyl-CoA degradation | 28.57 | 2 of 7 | ||
| 66794 | mevalonate metabolism | 28.57 | 2 of 7 | ||
| 66794 | toluene degradation | 25 | 1 of 4 | ||
| 66794 | cyclohexanol degradation | 25 | 1 of 4 | ||
| 66794 | vitamin E metabolism | 25 | 1 of 4 | ||
| 66794 | lactate fermentation | 25 | 1 of 4 | ||
| 66794 | carnitine metabolism | 25 | 2 of 8 | ||
| 66794 | biotin biosynthesis | 25 | 1 of 4 | ||
| 66794 | chlorophyll metabolism | 22.22 | 4 of 18 |
| Metadata FA analysis | |||||||||||||||||||||||||
| type of FA analysis | whole cell analysis | ||||||||||||||||||||||||
| method/protocol | CCUG | ||||||||||||||||||||||||
| @ref | 49475 | ||||||||||||||||||||||||
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| @ref | ControlQ | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 119377 | not determinedn.d. | + | - | - | + | +/- | + | - | - | +/- | + | + | + | +/- | - | - | - | - | - | - | - | - | - | - | - | + | +/- | +/- | + | +/- | - | + | +/- | +/- | - | +/- | + | + | - | + | + | + | - | - | - | - | - | - | - | + |
Global distribution of 16S sequence X79463 (>99% sequence identity) for Cellulomonas from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | ASM9286v1 assembly for Cellulomonas flavigena DSM 20109 | complete | 446466 | 98.73 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 99.90 | no |
| 125439 | gram_stain | BacteriaNetⓘ | positive | 96.68 | no |
| 125439 | motility | BacteriaNetⓘ | no | 69.35 | no |
| 125439 | spore_formation | BacteriaNetⓘ | no | 83.39 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 93.63 | yes |
| 125438 | anaerobic | anaerobicⓘ | no | 96.96 | yes |
| 125438 | aerobic | aerobicⓘ | yes | 74.38 | no |
| 125438 | spore-forming | spore-formingⓘ | no | 61.21 | no |
| 125438 | thermophilic | thermophileⓘ | no | 94.99 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 92.50 | yes |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Chitin-Active Lytic Polysaccharide Monooxygenases Are Rare in Cellulomonas Species. | Li J, Goddard-Borger ED, Raji O, Saxena H, Solhi L, Mathieu Y, Master ER, Wakarchuk WW, Brumer H. | Appl Environ Microbiol | 10.1128/aem.00968-22 | 2022 | ||
| Metabolism | Characterization of Cellulomonas sp. HM71 as potential probiotic strain for human health. | Yadav M, Kumar T, Maurya R, Pandey R, Chauhan NS. | Front Cell Infect Microbiol | 10.3389/fcimb.2022.1082674 | 2022 | |
| Identification, characteristics and rice growth promotion of a highly efficient cellulolytic bacterial strain, Cellulomonas iranensis ZJW-6, isolated from paddy soil in central China. | Wu L, Che S, Qin X, Xu Y, Tian S, Zhu Y, Song J, Guan Y, Wang D, Wu M, Yang X, Wu Z, Yang M. | Front Microbiol | 10.3389/fmicb.2023.1152966 | 2023 | ||
| Draft Genome Sequence of Cellulolytic and Xylanolytic Cellulomonas sp. Strain B6 Isolated from Subtropical Forest Soil. | Piccinni F, Murua Y, Ghio S, Talia P, Rivarola M, Campos E. | Genome Announc | 10.1128/genomea.00891-16 | 2016 | ||
| Xylanases of Cellulomonas flavigena: expression, biochemical characterization, and biotechnological potential. | Lisov AV, Belova OV, Lisova ZA, Vinokurova NG, Nagel AS, Andreeva-Kovalevskaya ZI, Budarina ZI, Nagornykh MO, Zakharova MV, Shadrin AM, Solonin AS, Leontievsky AA. | AMB Express | 10.1186/s13568-016-0308-7 | 2017 | ||
| Proteome | Charting the cellular and extracellular proteome analysis of Brevibacterium linens DSM 20158 with unsequenced genome by mass spectrometry-driven sequence similarity searches. | Shabbiri K, Botting CH, Adnan A, Fuszard M. | J Proteomics | 10.1016/j.jprot.2013.02.029 | 2013 | |
| Genetics | Complete genome sequence of the heavy metal resistant bacterium Agromyces aureus AR33T and comparison with related Actinobacteria. | Corretto E, Antonielli L, Sessitsch A, Compant S, Hofer C, Puschenreiter M, Brader G. | Stand Genomic Sci | 10.1186/s40793-016-0217-z | 2017 | |
| Complete genome sequence of Cellulomonas flavigena type strain (134). | Abt B, Foster B, Lapidus A, Clum A, Sun H, Pukall R, Lucas S, Glavina Del Rio T, Nolan M, Tice H, Cheng JF, Pitluck S, Liolios K, Ivanova N, Mavromatis K, Ovchinnikova G, Pati A, Goodwin L, Chen A, Palaniappan K, Land M, Hauser L, Chang YJ, Jeffries CD, Rohde M, Goker M, Woyke T, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP. | Stand Genomic Sci | 10.4056/sigs.1012662 | 2010 | ||
| Metabolism | Genome analysis to decipher syntrophy in the bacterial consortium 'SCP' for azo dye degradation. | Nanjani S, Paul D, Keharia H. | BMC Microbiol | 10.1186/s12866-021-02236-9 | 2021 | |
| Phylogeny | High phylogenetic diversity of glycosyl hydrolase family 10 and 11 xylanases in the sediment of Lake Dabusu in China. | Wang G, Huang X, Ng TB, Lin J, Ye XY. | PLoS One | 10.1371/journal.pone.0112798 | 2014 | |
| Metabolism | Genomics of aerobic cellulose utilization systems in actinobacteria. | Anderson I, Abt B, Lykidis A, Klenk HP, Kyrpides N, Ivanova N. | PLoS One | 10.1371/journal.pone.0039331 | 2012 | |
| Enzymology | The crystal structure of the core domain of a cellulose induced protein (Cip1) from Hypocrea jecorina, at 1.5 Å resolution. | Jacobson F, Karkehabadi S, Hansson H, Goedegebuur F, Wallace L, Mitchinson C, Piens K, Stals I, Sandgren M. | PLoS One | 10.1371/journal.pone.0070562 | 2013 | |
| Genetics | Unique k-mers as Strain-Specific Barcodes for Phylogenetic Analysis and Natural Microbiome Profiling. | Panyukov VV, Kiselev SS, Ozoline ON. | Int J Mol Sci | 10.3390/ijms21030944 | 2020 | |
| Metabolism | Polysaccharide Degradation Capability of Actinomycetales Soil Isolates from a Semiarid Grassland of the Colorado Plateau. | Yeager CM, Gallegos-Graves V, Dunbar J, Hesse CN, Daligault H, Kuske CR. | Appl Environ Microbiol | 10.1128/aem.03020-16 | 2017 | |
| Bacterial diversity obtained by culturable approaches in the gut of Glossina pallidipes population from a non sleeping sickness focus in Tanzania: preliminary results. | Malele I, Nyingilili H, Lyaruu E, Tauzin M, Bernard Ollivier B, Cayol JL, Fardeau ML, Geiger A. | BMC Microbiol | 10.1186/s12866-018-1288-3 | 2018 | ||
| In silico characterization of pectate lyase protein sequences from different source organisms. | Dubey AK, Yadav S, Kumar M, Singh VK, Sarangi BK, Yadav D. | Enzyme Res | 10.4061/2010/950230 | 2010 | ||
| Genetics | Direct comparisons of Illumina vs. Roche 454 sequencing technologies on the same microbial community DNA sample. | Luo C, Tsementzi D, Kyrpides N, Read T, Konstantinidis KT. | PLoS One | 10.1371/journal.pone.0030087 | 2012 | |
| Recent Developments and Challenges in the Enzymatic Formation of Nitrogen-Nitrogen Bonds. | Angeli C, Atienza-Sanz S, Schroder S, Hein A, Li Y, Argyrou A, Osipyan A, Terholsen H, Schmidt S. | ACS Catal | 10.1021/acscatal.4c05268 | 2025 | ||
| Medium optimization of protease production by Brevibacterium linens DSM 20158, using statistical approach. | Shabbiri K, Adnan A, Jamil S, Ahmad W, Noor B, Rafique HM. | Braz J Microbiol | 10.1590/s1517-838220120003000031 | 2012 | ||
| Enzymology | PKMiner: a database for exploring type II polyketide synthases. | Kim J, Yi GS. | BMC Microbiol | 10.1186/1471-2180-12-169 | 2012 | |
| Genetics | Whole genome analysis of Leptospira licerasiae provides insight into leptospiral evolution and pathogenicity. | Ricaldi JN, Fouts DE, Selengut JD, Harkins DM, Patra KP, Moreno A, Lehmann JS, Purushe J, Sanka R, Torres M, Webster NJ, Vinetz JM, Matthias MA. | PLoS Negl Trop Dis | 10.1371/journal.pntd.0001853 | 2012 | |
| Genetics | Developmental biology of Streptomyces from the perspective of 100 actinobacterial genome sequences. | Chandra G, Chater KF. | FEMS Microbiol Rev | 10.1111/1574-6976.12047 | 2014 | |
| Enzymology | Unexpected abundance of coenzyme F(420)-dependent enzymes in Mycobacterium tuberculosis and other actinobacteria. | Selengut JD, Haft DH. | J Bacteriol | 10.1128/jb.00425-10 | 2010 | |
| Enzymology | Simultaneous extraction from bacterioplankton of total RNA and DNA suitable for quantitative structure and function analyses. | Weinbauer MG, Fritz I, Wenderoth DF, Hofle MG. | Appl Environ Microbiol | 10.1128/aem.68.3.1082-1087.2002 | 2002 | |
| Phylogeny | Use of single-point genome signature tags as a universal tagging method for microbial genome surveys. | van der Lelie D, Lesaulnier C, McCorkle S, Geets J, Taghavi S, Dunn J. | Appl Environ Microbiol | 10.1128/aem.72.3.2092-2101.2006 | 2006 | |
| Metabolism | ABC transporters involved in export of cell surface glycoconjugates. | Cuthbertson L, Kos V, Whitfield C. | Microbiol Mol Biol Rev | 10.1128/mmbr.00009-10 | 2010 | |
| Phylogeny | Phylogenetic framework and molecular signatures for the main clades of the phylum Actinobacteria. | Gao B, Gupta RS. | Microbiol Mol Biol Rev | 10.1128/mmbr.05011-11 | 2012 | |
| Differential substrate preferences IN ACTINOBACTERIAL protein O-MANNOSYLTRANSFERASES and alteration of protein-O-MANNOSYLATION by choice of secretion pathway. | Saxena H, Patel R, Kelly J, Wakarchuk W. | Glycobiology | 10.1093/glycob/cwae095 | 2025 | ||
| Actinomycetes: A Source of Lignocellulolytic Enzymes. | Saini A, Aggarwal NK, Sharma A, Yadav A. | Enzyme Res | 10.1155/2015/279381 | 2015 | ||
| Designing novel cellulase systems through agent-based modeling and global sensitivity analysis. | Apte AA, Senger RS, Fong SS. | Bioengineered | 10.4161/bioe.29160 | 2014 | ||
| Phylogeny | Isolation and characterization of endophytic colonizing bacteria from agronomic crops and prairie plants. | Zinniel DK, Lambrecht P, Harris NB, Feng Z, Kuczmarski D, Higley P, Ishimaru CA, Arunakumari A, Barletta RG, Vidaver AK. | Appl Environ Microbiol | 10.1128/aem.68.5.2198-2208.2002 | 2002 | |
| Phylogeny | Peptidoglycan types of bacterial cell walls and their taxonomic implications. | Schleifer KH, Kandler O. | Bacteriol Rev | 10.1128/br.36.4.407-477.1972 | 1972 | |
| Two beta-glucanases from bacterium Cellulomonas flavigena: expression in Pichia pastoris, properties, biotechnological potential. | Lisov A, Belova O, Lisova Z, Nagel A, Shadrin A, Andreeva-Kovalevskaya Z, Nagornykh M, Zakharova M, Leontievsky A. | Prep Biochem Biotechnol | 10.1080/10826068.2023.2201934 | 2023 | ||
| Phylogeny | Cellulose-functionalized magnetic nanoparticle-mediated isolation of novel cellulolytic bacteria. | Zheng J, Xing L, Zheng N, Wang J, Zhao S. | Appl Environ Microbiol | 10.1128/aem.00788-25 | 2025 | |
| [Combined remediation of polycyclic aromatic hydrocarbons (PAHs) by plant and immobilized bacteria in contaminated soil]. | Li N, Liu R, Tai PD, Zhou XX, Xiao Y, Li LM, Hou LQ, Zheng TY. | Ying Yong Sheng Tai Xue Bao | 10.13287/j.1001-9332.202108.031 | 2021 | ||
| Biotechnology | Construction nanobiotechnology approach for performance enhancement of microbially induced biomineralization (MIB) using a biopolymer encapsulated spore-based system. | Debnath A, Sen R. | Appl Environ Microbiol | 10.1128/aem.01407-24 | 2024 | |
| Engineering mesophilic GH11 xylanase from Cellulomonas flavigena by rational design of N-terminus substitution. | Tian W, Zhang Z, Yang C, Li P, Xiao J, Wang R, Du P, Li N, Wang J. | Front Bioeng Biotechnol | 10.3389/fbioe.2022.1044291 | 2022 | ||
| Genetics | Endophytic and Epiphytic Microorganisms as Biocontrol Agents: Mechanisms, Applications, and Metagenomic Approaches in Tomato Cultivation. | Rakhalaru P, Mampholo BM, Mamphogoro TP, Thantsha MS. | Molecules | 10.3390/molecules30183816 | 2025 | |
| Process optimisation for improved chitinase production from marine isolate Bacillus haynesii and bioethanol production with Saccharomyces cerevisiae. | Govindaraj V, Anandan DK, Kim SK, Raval R, Raval K. | Braz J Microbiol | 10.1007/s42770-025-01644-7 | 2025 | ||
| Metabolism | Expression of a codon-optimized beta-glucosidase from Cellulomonas flavigena PR-22 in Saccharomyces cerevisiae for bioethanol production from cellobiose. | Rios-Franquez FJ, Gonzalez-Bautista E, Ponce-Noyola T, Ramos-Valdivia AC, Poggi-Varaldo HM, Garcia-Mena J, Martinez A. | Arch Microbiol | 10.1007/s00203-016-1333-2 | 2017 | |
| Enzymology | A jacalin-related lectin domain-containing lipase from chestnut (Castanea crenata): Purification, characterization, and protein identification. | Heo J, Kwon CW, Lee J, Park H, Yu H, Chang PS. | Curr Res Food Sci | 10.1016/j.crfs.2022.10.033 | 2022 | |
| Metabolism | Enzymatic saccharification of sugar cane bagasse by continuous xylanase and cellulase production from cellulomonas flavigena PR-22. | Rojas-Rejon OA, Poggi-Varaldo HM, Ramos-Valdivia AC, Ponce-Noyola T, Cristiani-Urbina E, Martinez A, de la Torre M. | Biotechnol Prog | 10.1002/btpr.2213 | 2016 | |
| Metabolism | Microbial fuel cells using Cellulomonas spp. with cellulose as fuel. | Takeuchi Y, Khawdas W, Aso Y, Ohara H. | J Biosci Bioeng | 10.1016/j.jbiosc.2016.10.009 | 2017 | |
| Bio-Enhanced Degradation Strategies for Fluoroquinolones in the Sewage Sludge Composting Stage: Molecular Modification and Resistance Gene Regulation. | Jin X, Zhao Y, Ren Z, Wang P, Li Y. | Int J Environ Res Public Health | 10.3390/ijerph19137766 | 2022 | ||
| Turning trash into treasure: Hermetia illucens microbiome and biodegradation of industrial side streams. | Kluber P, Gurusinga FF, Hurka S, Vilcinskas A, Tegtmeier D. | Appl Environ Microbiol | 10.1128/aem.00991-24 | 2024 | ||
| Effect of bacterial inoculation on co-composting of lavender (Lavandula angustifolia Mill.) waste and cattle manure. | Greff B, Szigeti J, Varga A, Lakatos E, Saho A, Varga L. | 3 Biotech | 10.1007/s13205-021-02860-2 | 2021 | ||
| Enzymology | Kinetic and thermodynamic characterization of lipase produced by Cellulomonas flavigena UNP3. | Prajapati V, Patel H, Trivedi U, Patel K. | J Basic Microbiol | 10.1002/jobm.201300065 | 2014 | |
| Identification and Characterization of a Novel Endo-beta-1,4-Xylanase from Streptomyces sp. T7 and Its Application in Xylo-Oligosaccharide Production. | Li Y, Zhang X, Lu C, Lu P, Yin C, Ye Z, Huang Z. | Molecules | 10.3390/molecules27082516 | 2022 | ||
| Enzymology | Use of organic waste for the production of added-value holocellulases with Cellulomonas flavigena PR-22 and Trichoderma reesei MCG 80. | Escamilla-Alvarado C, Poggi-Varaldo HM, Ponce-Noyola MT. | Waste Manag Res | 10.1177/0734242x13492841 | 2013 | |
| Enzymology | Aerobic bacterial microbiota isolated from the cloaca of the European pond turtle (Emys orbicularis) in Poland. | Nowakiewicz A, Ziolkowska G, Zieba P, Dziedzic BM, Gnat S, Wojcik M, Dziedzic R, Kostruba A. | J Wildl Dis | 10.7589/2013-07-157 | 2015 | |
| Genetics | Pangenome analysis of the genus Herbiconiux and proposal of four new species associated with Chinese medicinal plants. | Deng Y, Jiang ZM, Han XF, Su J, Yu LY, Liu WH, Zhang YQ. | Front Microbiol | 10.3389/fmicb.2023.1119226 | 2023 | |
| Four cellulose-active lytic polysaccharide monooxygenases from Cellulomonas species. | Li J, Solhi L, Goddard-Borger ED, Mathieu Y, Wakarchuk WW, Withers SG, Brumer H. | Biotechnol Biofuels | 10.1186/s13068-020-01860-3 | 2021 | ||
| Metabolism | Effective methane production from the Japanese weed Gyougi-shiba (Cynodon dactylon) is accomplished by colocalization of microbial communities that assimilate water-soluble and -insoluble fractions. | Matsuda S, Ohtsuki T. | FEMS Microbiol Lett | 10.1093/femsle/fnab015 | 2021 | |
| Enzymology | The family II carbohydrate-binding module of xylanase CflXyn11A from Cellulomonas flavigena increases the synergy with cellulase TrCel7B from Trichoderma reesei during the hydrolysis of sugar cane bagasse. | Pavon-Orozco P, Santiago-Hernandez A, Rosengren A, Hidalgo-Lara ME, Stalbrand H. | Bioresour Technol | 10.1016/j.biortech.2011.11.068 | 2012 | |
| Curdlan-like exopolysaccharide production by Cellulomonas flavigena UNP3 during growth on hydrocarbon substrates. | Arli SD, Trivedi UB, Patel KC. | World J Microbiol Biotechnol | 10.1007/s11274-010-0593-2 | 2011 | ||
| Metabolism | Assessing the xylanolytic bacterial diversity during the malting process. | Malfliet S, Juste A, Crauwels S, Willems K, De Cooman L, Lievens B, Aerts G. | Food Microbiol | 10.1016/j.fm.2013.06.025 | 2013 | |
| Genetics | Genome sequencing and annotation of Cellulomonas sp. HZM. | Chua P, Har ZM, Austin CM, Yule CM, Dykes GA, Lee SM. | Genom Data | 10.1016/j.gdata.2015.05.009 | 2015 | |
| Metabolism | Cyclic AMP regulates the biosynthesis of cellobiohydrolase in Cellulomonas flavigena growing in sugar cane bagasse. | Herrera-Herrera JA, Perez-Avalos O, Salgado LM, Ponce-Noyola T. | Arch Microbiol | 10.1007/s00203-009-0502-y | 2009 | |
| Enzymology | Production of cellulases and xylanases under catabolic repression conditions from mutant PR-22 of Cellulomonas flavigena. | Rojas-Rejon OA, Poggi-Varaldo HM, Ramos-Valdivia AC, Martinez-Jimenez A, Cristiani-Urbina E, de la Torre Martinez M, Ponce-Noyola T. | J Ind Microbiol Biotechnol | 10.1007/s10295-010-0821-7 | 2011 | |
| Metabolism | Cloning and expression of a novel, moderately thermostable xylanase-encoding gene (Cflxyn11A) from Cellulomonas flavigena. | Amaya-Delgado L, Mejia-Castillo T, Santiago-Hernandez A, Vega-Estrada J, Amelia FG, Xoconostle-Cazares B, Ruiz-Medrano R, Montes-Horcasitas Mdel C, Hidalgo-Lara ME. | Bioresour Technol | 10.1016/j.biortech.2010.02.057 | 2010 | |
| Isolation of Bacterial and Fungal Microbiota Associated with Hermetia illucens Larvae Reveals Novel Insights into Entomopathogenicity. | Kluber P, Muller S, Schmidt J, Zorn H, Ruhl M. | Microorganisms | 10.3390/microorganisms10020319 | 2022 | ||
| Purification, characterization and modular organization of a cellulose-binding protein, CBP105, a processive beta-1,4-endoglucanase from Cellulomonas flavigena | Mejia-Castillo T, Hidalgo-Lara ME, Brieba LG, Ortega-Lopez J. | Biotechnol Lett | 2008 | |||
| Purification, characterization and modular organization of a cellulose-binding protein, CBP105, a processive beta-1,4-endoglucanase from Cellulomonas flavigena | Mejia-Castillo T, Hidalgo-Lara ME, Brieba LG, Ortega-Lopez J. | Biotechnol Lett | 2008 | |||
| Metabolism | A bifunctional endoglucanase/endoxylanase from Cellulomonas flavigena with potential use in industrial processes at different pH. | Perez-Avalos O, Sanchez-Herrera LM, Salgado LM, Ponce-Noyola T. | Curr Microbiol | 10.1007/s00284-008-9149-1 | 2008 | |
| Phylogeny | Isolation of some pathogenic bacteria from the great spruce bark beetle, Dendroctonus micans and its specific predator, Rhizophagus grandis. | Yaman M, Erturk O, Aslan I. | Folia Microbiol (Praha) | 10.1007/s12223-010-0006-9 | 2010 | |
| Enzymology | Purification, characterization and modular organization of a cellulose-binding protein, CBP105, a processive beta-1,4-endoglucanase from Cellulomonas flavigena. | Mejia-Castillo T, Hidalgo-Lara ME, Brieba LG, Ortega-Lopez J. | Biotechnol Lett | 10.1007/s10529-007-9589-x | 2008 | |
| Enzymology | Differential expression of cellulases and xylanases by Cellulomonas flavigena grown on different carbon sources. | Sanchez-Herrera LM, Ramos-Valdivia AC, de la Torre M, Salgado LM, Ponce-Noyola T. | Appl Microbiol Biotechnol | 10.1007/s00253-007-1190-7 | 2007 | |
| Metabolism | Characterization of a beta-glucosidase produced by a high-specific growth-rate mutant of Cellulomonas flavigena. | Barrera-Islas GA, Ramos-Valdivia AC, Salgado LM, Ponce-Noyola T. | Curr Microbiol | 10.1007/s00284-006-0105-7 | 2007 | |
| Genetics | A machine learning framework to determine geolocations from metagenomic profiling. | Huang L, Xu C, Yang W, Yu R. | Biol Direct | 10.1186/s13062-020-00278-z | 2020 | |
| Metabolism | Purification and characterization of two sugarcane bagasse-absorbable thermophilic xylanases from the mesophilic Cellulomonas flavigena. | Santiago-Hernandez A, Vega-Estrada J, del Carmen Montes-Horcasitas M, Hidalgo-Lara ME. | J Ind Microbiol Biotechnol | 10.1007/s10295-006-0202-4 | 2007 | |
| Enzymology | Survey of bacterial populations present in US-produced linerboard with high recycle content. | Namjoshi K, Johnson S, Montello P, Pullman GS. | J Appl Microbiol | 10.1111/j.1365-2672.2009.04437.x | 2010 | |
| Metabolism | Enhancing effect of iron on chromate reduction by Cellulomonas flavigena. | Xu W, Liu Y, Zeng G, Li X, Tang C, Yuan X. | J Hazard Mater | 10.1016/j.jhazmat.2005.03.056 | 2005 | |
| Enzymology | Induction of xylanases by sugar cane bagasse at different cell densities of Cellulomonas flavigena. | Amaya-Delgado L, Vega-Estrada J, Flores-Cotera LB, Dendooven L, Hidalgo-Lara ME, Montes-Horcasitas MC. | Appl Microbiol Biotechnol | 10.1007/s00253-005-0096-5 | 2006 | |
| Enzymology | Beta-methyl-xyloside: positive effect on xylanase induction in Cellulomonas flavigena. | Hidalgo-Lara ME, Farres GS, Montes-Horcasitas Mdel C. | J Ind Microbiol Biotechnol | 10.1007/s10295-005-0258-6 | 2005 | |
| Efficient transformation of Cellulomonas flavigena by electroporation and conjugation with Bacillus thuringiensis. | Montes-Horcasitas C, Ruiz-Medrano R, Magana-Plaza I, Silva LG, Herrera-Martinez A, Hernandez-Montalvo L, Xoconostle-Cazares B. | Curr Microbiol | 10.1007/s00284-004-4329-0 | 2004 | ||
| Lactic Acid Fermentation of Arabinoxylan From Nejayote by Streptococcus infantarius ssp. infantarius 25124 Isolated From Pozol. | Cooper-Bribiesca B, Navarro-Ocana A, Diaz-Ruiz G, Aguilar-Osorio G, Rodriguez-Sanoja R, Wacher C. | Front Microbiol | 10.3389/fmicb.2018.03061 | 2018 | ||
| Synthesis and regulation of D-xylanase from Cellulomonas flavigena wild type and a mutant | Perez-Avalos O, Ponce-Noyola T. | Biotechnol Lett | 10.1023/a:1015592620091 | 2002 | ||
| Biocontrol of tomato late blight with the combination of epiphytic antagonists and rhizobacteria | Lourenco Junior V, Maffia LA, Romeiro RdS, Mizubuti ESG. | Biol Control | 10.1016/j.biocontrol.2006.04.005 | 2006 | ||
| Mechanism of differential expression of beta-glucosidase genes in functional microbial communities in response to carbon catabolite repression. | Zhang X, Chen X, Li S, Bello A, Liu J, Gao L, Fan Z, Wang S, Liu L, Ma B, Li H. | Biotechnol Biofuels Bioprod | 10.1186/s13068-021-02101-x | 2022 | ||
| Enzymology | Cellulomonas flavigena: characterization of an endo-1,4-xylanase tightly induced by sugarcane bagasse. | Mayorga-Reyes L, Morales Y, Salgado LM, Ortega A, Ponce-Noyola T. | FEMS Microbiol Lett | 10.1111/j.1574-6968.2002.tb11348.x | 2002 | |
| Enzymology | Expression and characterization of the celcflB gene from Cellulomonas flavigena encoding an endo-beta-1,4-glucanase. | Gutierrez-Nava A, Herrera-Herrera A, Mayorga-Reyes L, Salgado LM, Ponce-Noyola T. | Curr Microbiol | 10.1007/s00284-002-4016-y | 2003 | |
| Enzymology | Draw-fill batch culture mode for production of xylanases by Cellulomonas flavigena on sugar cane bagasse. | Vega-Estrada J, Flores-Cotera LB, Santiago A, Magana-Plaza I, Montes-Horcasitas C. | Appl Microbiol Biotechnol | 10.1007/s00253-001-0908-1 | 2002 | |
| Metabolism | Characterization of a thermostable endoglucanase produced by Isoptericola variabilis sp. IDAH9. | Azizi M, Hemmat J, Seifati SM, Torktaz I, Karimi S. | Braz J Microbiol | 10.1590/s1517-838246420140846 | 2015 | |
| Metabolism | Regulation of cellulases and xylanases from a derepressed mutant of Cellulomonas flavigena growing on sugar-cane bagasse in continuous culture. | Ponce-Noyola T, de la Torre M. | Bioresour Technol | 10.1016/s0960-8524(00)00181-4 | 2001 | |
| Phylogeny | Carboxymethyl cellulase production optimization from newly isolated thermophilic Bacillus subtilis K-18 for saccharification using response surface methodology. | Irfan M, Mushtaq Q, Tabssum F, Shakir HA, Qazi JI. | AMB Express | 10.1186/s13568-017-0331-3 | 2017 | |
| Screening currency notes for microbial pathogens and antibiotic resistance genes using a shotgun metagenomic approach. | Jalali S, Kohli S, Latka C, Bhatia S, Vellarikal SK, Sivasubbu S, Scaria V, Ramachandran S. | PLoS One | 10.1371/journal.pone.0128711 | 2015 | ||
| Molecular cloning and expression of uricase gene from Arthrobacter globiformis in Escherichia coli and characterization of the gene product. | Suzuki K, Sakasegawa S, Misaki H, Sugiyama M. | J Biosci Bioeng | 10.1016/s1389-1723(04)00259-2 | 2004 | ||
| Increasing the heterologous production of spinosad in Streptomyces albus J1074 by regulating biosynthesis of its polyketide skeleton. | An Z, Tao H, Wang Y, Xia B, Zou Y, Fu S, Fang F, Sun X, Huang R, Xia Y, Deng Z, Liu R, Liu T. | Synth Syst Biotechnol | 10.1016/j.synbio.2021.09.008 | 2021 | ||
| Enzymology | Identification, cloning and expression of Pseudomonas aeruginosa Ps-x putative urate oxidase gene in Escherichia coli. | Saeed HM, Abdel-Fattah YR, Berekaa MM, Gohar YM, Elbaz MA. | Pol J Microbiol | 2004 | ||
| COVID-19 face masks attracted Cellulomonas and Acinetobacter bacteria and provided breeding haven for red cotton bug (Dysdercus suturellus) and house cricket (Acheta domesticus). | Idowu GA, Olalemi AO, Ileke KD. | Environ Sci Pollut Res Int | 10.1007/s11356-022-23865-1 | 2023 | ||
| Isolation of chitin from shrimp shells deproteinized by Candida parapsilosis CCRC 20515 | Chen HC, Phang KA, Wu SD, Mau WJ. | Food Sci Agric Chem | 2001 | |||
| Bacterial populations associated with rice seed in the tropical environment. | Cottyn B, Regalado E, Lanoot B, De Cleene M, Mew TW, Swings J. | Phytopathology | 10.1094/phyto.2001.91.3.282 | 2001 | ||
| Metabolism | Vitamin requirements of hydrocarbon-utilizing soil bacteria. | Radwan SS, Al-Muteirie AS. | Microbiol Res | 10.1016/s0944-5013(01)80008-2 | 2001 | |
| Metabolism | Considerations on the use of exogenous fibrolytic enzymes to improve forage utilization. | Mendoza GD, Loera-Corral O, Plata-Perez FX, Hernandez-Garcia PA, Ramirez-Mella M. | ScientificWorldJournal | 10.1155/2014/247437 | 2014 | |
| Proteome | Conserved and divergent chaperoning effects of Hsp60/10 chaperonins on protein folding landscapes. | Sadat A, Tiwari S, Sunidhi S, Chaphalkar A, Kochar M, Ali M, Zaidi Z, Sharma A, Verma K, Narayana Rao KB, Tripathi M, Ghosh A, Gautam D, Atul, Ray A, Mapa K, Chakraborty K. | Proc Natl Acad Sci U S A | 10.1073/pnas.2118465119 | 2022 | |
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| Cellulomonas xiejunii sp. nov., Cellulomonas chengniuliangii sp. nov. and Cellulomonas wangsupingiae sp. nov., three cellulolytic bacteria isolated from intestinal contents of Marmota himalayana. | Ye L, Zhang G, Pu J, Yang C, Liu Y, Xu M, Jin D, Lu S, Liu L, Yang J, Xu J. | Int J Syst Evol Microbiol | 10.1099/ijsem.0.005909 | 2023 | ||
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| Phylogeny | Cellulomonas shaoxiangyii sp. nov., isolated from faeces of Tibetan antelope (Pantholops hodgsonii) on the Qinghai-Tibet Plateau. | Tian Z, Lu S, Jin D, Yang J, Pu J, Lai XH, Ren ZH, Wu XM, Li J, Wang S, Xu J | Int J Syst Evol Microbiol | 10.1099/ijsem.0.003939 | 2020 | |
| Phylogeny | Cellulomonas macrotermitis sp. nov., a chitinolytic and cellulolytic bacterium isolated from the hindgut of a fungus-growing termite. | Sun X, Li J, Du J, Xiao H, Ni J | Antonie Van Leeuwenhoek | 10.1007/s10482-017-0968-6 | 2017 | |
| Phylogeny | The genome sequences of Cellulomonas fimi and "Cellvibrio gilvus" reveal the cellulolytic strategies of two facultative anaerobes, transfer of "Cellvibrio gilvus" to the genus Cellulomonas, and proposal of Cellulomonas gilvus sp. nov. | Christopherson MR, Suen G, Bramhacharya S, Jewell KA, Aylward FO, Mead D, Brumm PJ | PLoS One | 10.1371/journal.pone.0053954 | 2013 | |
| Phylogeny | Cellulomonas phragmiteti sp. nov., a cellulolytic bacterium isolated from reed (Phragmites australis) periphyton in a shallow soda pond. | Rusznyak A, Toth EM, Schumann P, Sproer C, Makk J, Szabo G, Vladar P, Marialigeti K, Borsodi AK | Int J Syst Evol Microbiol | 10.1099/ijs.0.022608-0 | 2010 |
| #8534 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20109 |
| #18620 | Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig . |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20216 | Curators of the JMRC: Jena Microbial Resource Collection (JMRC): |
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| #37348 | ; Curators of the CIP; |
| #43361 | Erko Stackenbrandt, Otto Kandler: Taxonomy of the Genus Cellulomonas, Based on Phenotypic Characters and Deoxyribonucleic Acid-Deoxyribonucleic Acid Homology, and Proposal of Seven Neotype Strains. IJSEM 29: 273 - 282 1979 ( DOI 10.1099/00207713-29-4-273 ) |
| #49475 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 28996 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #66793 | Mukherjee et al.: GEBA: 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life. 35: 676 - 683 2017 ( DOI 10.1038/nbt.3886 , PubMed 28604660 ) |
| #66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 ) |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68368 | Automatically annotated from API 20E . |
| #68371 | Automatically annotated from API 50CH acid . |
| #68379 | Automatically annotated from API Coryne . |
| #68382 | Automatically annotated from API zym . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #119377 | Collection of Institut Pasteur ; Curators of the CIP; CIP 82.10 |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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