Name: Phenylobacterium muchangponense A8
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 2349

Type strain:

Species: Phenylobacterium muchangponense

Strain Designation: A8

Culture col. no.: DSM 26616, KACC 15042, LMG 25973

Strain history: <- KACC <- D.-H. Roh and Y.-S. Oh, Chungbuk Natl. Univ., Dept. Microbiol. and Biotechnol. Res. Inst., Korea

NCBI tax ID(s): 760012 (species)

SI-ID 402060

DSM 26616

Section

Phenylobacterium muchangponense A8 is an aerobe, mesophilic, Gram-negative bacterium that was isolated from beach soil.

Gram-negative
ovoid-shaped
aerobe
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Caulobacterales*
	Family	*Caulobacteraceae*
	Genus	*Phenylobacterium*
	Species	**Phenylobacterium muchangponense**
	Full Scientific Name (LPSN)	Phenylobacterium muchangponense Oh and Roh 2012

Information on morphological and physiological properties Morphology

[Ref.: #30056]	Gram stain	negative

[Ref.: #30056]	Cell length	0.7-1.3 µm

[Ref.: #30056]	Cell width	0.5-0.6 µm

[Ref.: #30056]	Cell shape	ovoid-shaped

[Ref.: #30056]	Motility	no

[Ref.: #30056]

Pigment production

Information on culture and growth conditions Culture and growth conditions

[Ref.: #18258]

Culture medium

R2A MEDIUM (DSMZ Medium 830)

[Ref.: #18258]

Culture medium growth

[Ref.: #18258]

Culture medium link

Medium recipe at MediaDive

[Ref.: #18258]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #18258]	growth	28 °C
[Ref.: #30056]	growth	15-40 °C
[Ref.: #30056]	optimum	25-35 °C

[Ref.: #18258]	Temperature range	mesophilic
[Ref.: #30056]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #30056]			optimum	7
[Ref.: #30056]			growth	5.5-9.5

Information on physiology and metabolism Physiology and metabolism

[Ref.: #30056]

Oxygen tolerance

aerobe

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #30056]		NaCl		growth	0-0.5	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #30056]	3-hydroxybutyrate ChEBI	+	carbon source
[Ref.: #30056]	adipate ChEBI	+	carbon source
[Ref.: #30056]	galactose ChEBI	+	carbon source
[Ref.: #30056]	glycogen ChEBI	+	carbon source
[Ref.: #30056]	malate ChEBI	+	carbon source
[Ref.: #30056]	N-acetylglucosamine ChEBI	+	carbon source
[Ref.: #30056]	phenylalanine ChEBI	+	carbon source
[Ref.: #30056]	proline ChEBI	+	carbon source
[Ref.: #30056]	propionate ChEBI	+	carbon source
[Ref.: #30056]	pyruvate ChEBI	+	carbon source
[Ref.: #30056]	suberic acid ChEBI	+	carbon source
[Ref.: #30056]	valerate ChEBI	+	carbon source
	Only first 10 entries are displayed. Click here to see all.

	Enzyme	Enzyme activity	EC number
[Ref.: #30056]	alkaline phosphatase	+	3.1.3.1
[Ref.: #30056]	catalase	+	1.11.1.6
[Ref.: #30056]	cytochrome oxidase	+	1.9.3.1

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #18258]	Sample type/isolated from	beach soil
[Ref.: #18258]	Geographic location (country and/or sea, region)	Yellow Sea, Muchangpo
[Ref.: #18258]	Country	Republic of Korea
[Ref.: #18258]	Country ISO 3 Code	KOR
[Ref.: #18258]	Continent	Asia
[Ref.: #18258]	Geographic location	36.5000°/126.8330°
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Coast
#Environmental	#Terrestrial	#Soil

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #18258]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #18258]	Phenylobacterium muchangponense strain A8 16S ribosomal RNA gene, partial sequence	HM047736	1440	ENA	760012 tax ID

[Ref.: #18258]

GC-content

72.3 mol%

Availability in culture collections External links

[Ref.: #18258]

Culture collection no.

DSM 26616, KACC 15042, LMG 25973

[Ref.: #71904]

SI-ID 402060

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Phenylobacterium panacis sp. nov., isolated from the rhizosphere of rusty mountain ginseng.	Farh ME, Kim YJ, Singh P, Hoang VA, Yang DC	Int J Syst Evol Microbiol	10.1099/ijsem.0.001109	2016	*
Phylogeny	Phenylobacterium muchangponense sp. nov., isolated from beach soil, and emended description of the genus Phenylobacterium.	Oh YS, Roh DH	Int J Syst Evol Microbiol	10.1099/ijs.0.028902-0	2011	*

References

#18258

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 26616

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#30056

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26417 (see below)

#71904

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID402060.1 )

#26417

IJSEM 977 2012 ( DOI 10.1099/ijs.0.028902-0 , PubMed 21669924 )

* These data were automatically processed and therefore are not curated

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