Name: Rhodothermus sp. AR 3
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 23442

Type strain:

Species: Rhodothermus sp.

Strain Designation: AR 3

Culture col. no.: DSM 18403, JCM 13927

Strain history: R. Tanaka AR3.

NCBI tax ID(s): 2591385 (species)

SI-ID 408055

DSM 18403

Other strains from Rhodothermus sp.

R. sp. 4004, DSM 14422

Section

Rhodothermus sp. AR 3 is a thermophilic bacterium that was isolated from hot spring.

thermophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Rhodothermota*
	Class	*Rhodothermia*
	Order	*Rhodothermales*
	Family	*Rhodothermaceae*
	Genus	*Rhodothermus*
	Full Scientific Name (LPSN)	Rhodothermus Alfredsson et al. 1995

Information on culture and growth conditions Culture and growth conditions

[Ref.: #19084]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

[Ref.: #19084]

Culture medium growth

[Ref.: #19084]

Culture medium link

Medium recipe at MediaDive

[Ref.: #19084]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #19084]			growth	70 °C
[Ref.: #67770]			growth	70 °C

[Ref.: #19084]	Temperature range	thermophilic
[Ref.: #67770]	Temperature range	thermophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #19084]	Sample type/isolated from	hot spring
[Ref.: #19084]	Geographic location (country and/or sea, region)	Arima, Hyogo
[Ref.: #19084]	Country	Japan
[Ref.: #19084]	Country ISO 3 Code	JPN
[Ref.: #19084]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Terrestrial hot spring at Arima
[Ref.: #67770]	Geographic location (country and/or sea, region)	Hyogo Pref.
[Ref.: #67770]	Country	Japan
[Ref.: #67770]	Country ISO 3 Code	JPN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Thermal spring
#Condition	#Thermophilic (>45°C)	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AB252420 (>99% sequence identity) for Rhodothermus marinus from Microbeatlas

Aquatic Samples	243
Soil Samples	193
Animal Samples	134
Plant Samples	31
Total Samples	601

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #19084]	Rhodothermus clarus gene for 16S rRNA, partial sequence	AB252420	1441	ENA	374811 tax ID

[Ref.: #67770]

GC-content

66 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #19084]

Culture collection no.

DSM 18403, JCM 13927

[Ref.: #87594]

SI-ID 408055

References

#19084

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 18403

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#87594

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID408055.1 )

* These data were automatically processed and therefore are not curated

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