Streptomyces chilikensis RC1830 | Type strain | DSM 42072, JCM 18411

Strain identifier

BacDive ID: 23302

Type strain:

Species: Streptomyces chilikensis

Strain Designation: RC1830

Culture col. no.: DSM 42072, JCM 18411

Section

Name and taxonomic classification
Morphology and physiology
Culture and growth conditions
Isolation, sampling and environmental information
Application and interaction
Molecular biology
Strain availability

External links

Information on the name and the taxonomic classification.Name and taxonomic classification

[Ref.: #18929]	Domain	Bacteria
[Ref.: #18929]	Phylum	Actinobacteria
[Ref.: #18929]	Class	Actinobacteria
[Ref.: #18929]	Order	Actinomycetales
[Ref.: #18929]	Family	Streptomycetaceae
[Ref.: #18929]	Genus	Streptomyces
[Ref.: #18929]	Species	Streptomyces chilikensis
[Ref.: #18929]	Full Scientific Name	Streptomyces sp.
[Ref.: #18929]	Strain Designation	RC1830
[Ref.: #18929]	Type strain

		Prokaryotic Nomenclature Up-to-date (PNU)	Taxonomical status	Literature reference
	Last PNU update	26-03-2019 (DD-MM-YYYY)
[Ref.: #20215]	Domain	Bacteria
[Ref.: #20215]	Phylum	Actinobacteria
[Ref.: #20215]	Class	Actinobacteria		Int. J. Syst. Bacteriol. 47:483*
[Ref.: #20215]	Family	Streptomycetaceae
[Ref.: #20215]	Genus	Streptomyces	genus (AL)	Int. J. Syst. Bacteriol. 30:225
[Ref.: #20215]	Species	Streptomyces chilikensis	sp. nov. (VP)	Int. J. Syst. Evol. Microbiol. 63:2757*
[Ref.: #20215]	Full Scientific Name	Streptomyces chilikensis Ray et al. 2013

Information on morphological and physiological propertiesMorphology and physiology

[Ref.: #30864]	Gram stain	positive
[Ref.: #30864]	Cell length	1.4 µm
[Ref.: #30864]	Cell width	1 µm
[Ref.: #30864]	Cell shape	ovoid-shaped
[Ref.: #30864]	Motility	no

	Enzyme	Enzyme activity	EC number
[Ref.: #30864]	catalase	+	1.11.1.6
[Ref.: #30864]	cytochrome oxidase	+	1.9.3.1
[Ref.: #30864]	gelatinase	+

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #30864]		NaCl		growth	02-12	%
[Ref.: #30864]		NaCl		optimum	8	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #30864]	Arabinose	+	carbon source
[Ref.: #30864]	Cellobiose	+	carbon source
[Ref.: #30864]	Fructose	+	carbon source
[Ref.: #30864]	Galactose	+	carbon source
[Ref.: #30864]	Glucose	+	carbon source
[Ref.: #30864]	Maltose	+	carbon source
[Ref.: #30864]	Mannose	+	carbon source
[Ref.: #30864]	Raffinose	+	carbon source
[Ref.: #30864]	Rhamnose	+	carbon source
[Ref.: #30864]	Sucrose	+	carbon source
[Ref.: #30864]	Xylose	+	carbon source
	Only first 10 entries are displayed. Click here to see all.

[Ref.: #18929]	Multimedia content
[Ref.: #18929]	Caption	Medium 65 28°C
[Ref.: #18929]	License/Copyright	(C) Leibniz-Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH
[Ref.: #18929]	Intellectual property rights	© Leibniz-Institut DSMZ

[Ref.: #30864]

Observation

aggregates in chains

[Ref.: #30864]

Oxygen tolerance

aerobe

[Ref.: #30864]

Ability of spore formation

yes

Information on culture and growth conditionsCulture and growth conditions

[Ref.: #18929]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65), 28°C

[Ref.: #18929]

Culture medium growth

[Ref.: #18929]

Culture medium link

medium recipe provided by DSMZ

		Temperature
[Ref.: #18929]	growth	28 ̊C
[Ref.: #30864]	growth	28-40 ̊C
[Ref.: #30864]	optimum	30 ̊C

[Ref.: #18929]	Temperature range	mesophilic
[Ref.: #30864]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #30864]			optimum	8
[Ref.: #30864]			growth	06-10

Information on isolation source, the sampling and environmental conditionsIsolation, sampling and environmental information

[Ref.: #18929]

Sample type/isolated from

estuarine brackish water sediment from a boat dockyard

[Ref.: #18929]

Geographic location (country and/or sea, region)

Odisha, District Khurdha, Chilika Lake, Chandraput (19° 71' N and 85° 19' E)

[Ref.: #18929]

Country

India

[Ref.: #18929]

Continent

Asia

[Ref.: #18929]

Geographic location

20.1833°/85.3167°

Isolation sources categories

#Environmental	#Aquatic	#Brackish
#Environmental	#Aquatic	#Sediment

What are isolation sources categories?

* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hostsApplication and interaction

[Ref.: #18929]

Biosafety level

Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databassMolecular biology

[Ref.: #18929]	GC-content	66.8 mol%	thermal denaturation, midpoint method (Tm)
[Ref.: #30864]	GC-content	66.8 mol%

Sequence information:

	Sequence database	Sequence accession description	Sequence accession number	Sequence type	Sequence length (bp)	Associated NCBI tax ID
[Ref.: #18929]	GenBank Direct submission	Streptomyces chilikensis strain RC 1830 16S ribosomal RNA gene, partial sequence	JN050256	16S	1491	1194079

Availability in culture collectionsStrain availability

[Ref.: #18929]

Culture collection no.

DSM 42072, JCM 18411

[Ref.: #18929]

Strain history

<- V. Raina, School of Biotechnology Kiit Univ. Odisha, India; RC1830 <- L. Ray, KIIT Univ., India

[Ref.: #20218]

Associated Passport(s) in StrainInfo

890497, 890496

References

#18929

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 42072

#20215

Leibniz Institute DSMZ D.Gleim, M.Kracht, N.Weiss et. al.: Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#30864

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 ) - originally annotated from #27194 (see below)

#27194

IJSEM 2757 2013 ( DOI 10.1099/ijs.0.046284-0 )

* These References are textmined

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