Name: Staphylococcus pseudintermedius S33
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 23297

Type strain:

Species: Staphylococcus pseudintermedius

Strain Designation: S33, Sp33

Culture col. no.: DSM 25714

Strain history: <- V. Savini, Spirito Santo Hospital, Microbiology and Virology; S33

NCBI tax ID(s): 283734 (species)

SI-ID 404829

DSM 25714

Other strains from Staphylococcus pseudintermedius

Section

Staphylococcus pseudintermedius S33 is a mesophilic human pathogen that was isolated from Graft versus Host disease - related skin ulcer purulent discharge.

human pathogen
mesophilic
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Staphylococcaceae*
	Genus	*Staphylococcus*
	Species	**Staphylococcus pseudintermedius**
	Full Scientific Name (LPSN)	Staphylococcus pseudintermedius Devriese et al. 2005

Information on morphological and physiological properties Morphology

[Ref.: #19032]	Type of hemolysis	beta
[Ref.: #19032]	Hemolysis ability	1
[Ref.: #19032]	Incubation period	1-2 days

Information on culture and growth conditions Culture and growth conditions

[Ref.: #19032]

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

[Ref.: #19032]

Culture medium growth

[Ref.: #19032]

Culture medium link

Medium recipe at MediaDive

[Ref.: #19032]

Culture medium composition

expand / minimize

[Ref.: #19032]

Culture medium

TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)

[Ref.: #19032]

Culture medium growth

[Ref.: #19032]

Culture medium link

Medium recipe at MediaDive

[Ref.: #19032]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #19032]			growth	37 °C

[Ref.: #19032]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68375]	arabinose ChEBI	-	fermentation	* from API ID32STA
[Ref.: #68375]	arginine ChEBI	-	hydrolysis	* from API ID32STA
[Ref.: #68375]	D-fructose ChEBI	+	fermentation	* from API ID32STA
[Ref.: #68375]	D-glucose ChEBI	+	fermentation	* from API ID32STA
[Ref.: #68375]	D-mannitol ChEBI	+	fermentation	* from API ID32STA
[Ref.: #68375]	D-mannose ChEBI	+	fermentation	* from API ID32STA
[Ref.: #68375]	esculin ChEBI	-	hydrolysis	* from API ID32STA
[Ref.: #68375]	lactose ChEBI	+	fermentation	* from API ID32STA
[Ref.: #68375]	maltose ChEBI	+	fermentation	* from API ID32STA
[Ref.: #68375]	N-acetylglucosamine ChEBI	+	fermentation	* from API ID32STA
[Ref.: #68375]	nitrate ChEBI	+	reduction	* from API ID32STA
[Ref.: #68375]	ornithine ChEBI	-	degradation	* from API ID32STA
[Ref.: #68375]	sucrose ChEBI	+	fermentation	* from API ID32STA
[Ref.: #68375]	trehalose ChEBI	+	fermentation	* from API ID32STA
[Ref.: #68375]	urea ChEBI	+	hydrolysis	* from API ID32STA
	Only first 10 entries are displayed. Click here to see all.

	Antibiotica	Metabolite	Antibiotic sensitivity	Concentration
[Ref.: #68375]		novobiocin ChEBI	yes	1.8	µg	* from API ID32STA

	Metabolite production	Metabolite	Production
[Ref.: #68375]		acetoin ChEBI	no	* from API ID32STA

	Physiological tests	Metabolite	Voges-Proskauer-test
[Ref.: #68375]		acetoin ChEBI	-	* from API ID32STA

	Enzyme	Enzyme activity	EC number
[Ref.: #68375]	alkaline phosphatase	+	3.1.3.1	* from API ID32STA
[Ref.: #68375]	arginine dihydrolase	-	3.5.3.6	* from API ID32STA
[Ref.: #68375]	beta-galactosidase	+	3.2.1.23	* from API ID32STA
[Ref.: #68375]	beta-glucosidase	-	3.2.1.21	* from API ID32STA
[Ref.: #68375]	beta-glucuronidase	-	3.2.1.31	* from API ID32STA
[Ref.: #19032]	catalase	+	1.11.1.6
[Ref.: #19032]	cytochrome-c oxidase	-	1.9.3.1
[Ref.: #68375]	L-arginine arylamidase	-		* from API ID32STA
[Ref.: #68375]	ornithine decarboxylase	-	4.1.1.17	* from API ID32STA
[Ref.: #68375]	pyrrolidonyl arylamidase	+	3.4.19.3	* from API ID32STA
[Ref.: #68375]	urease	+	3.5.1.5	* from API ID32STA
	Only first 10 entries are displayed. Click here to see all.

API® ID32STA:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Urease/urea hydrolysisURE	Arginine dihydrolaseADH (Arg)	Ornithine decarboxylaseODC	Esculin hydrolysisESC	Fermentation of D-glucoseGLU	Fermentation of D-fructoseFRU	Fermentation of D-mannoseMNE	Fermentation of maltoseMAL	Fermentation of lactoseLAC	Fermentation of trehaloseTRE	Fermentation of D-mannitolMAN	Fermentation of raffinoseRAF	Fermentation of D-riboseRIB	Fermentation of cellobioseCEL	Reduction of nitrateNIT	Acetoin production (Voges Proskauer test)VP	beta-Galactosidasebeta GAL	L-arginine arylamidaseArgA	Alkaline phosphatasePAL	Pyrrolidonyl arylamidasePyrA	Novobiocin resistanceNOVO	Fermentation of sucroseSAC	Fermentation of N-acetyl-glucosamineNAG	Fermentation of turanoseTUR	Fermentation of arabinoseARA	beta-Glucuronidasebeta GUR
[Ref.: #19032]	6190	+	-	-	-	+	+	+	+	+	+	+	+	-	+	+	-	+	-	+	+	-	+	+	+	-	-
[Ref.: #19032]	6118	+	-	-	-	+	+	+	+	+	+	+	-	+	-	+	-	+	-	+	+	-	+	+	+/-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #19032]	Sample type/isolated from	Graft versus Host disease - related skin ulcer purulent discharge
[Ref.: #19032]	Geographic location (country and/or sea, region)	Abruzzo, Pescara
[Ref.: #19032]	Country	Italy
[Ref.: #19032]	Country ISO 3 Code	ITA
[Ref.: #19032]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Host Body-Site	#Organ	#Skin, Nail, Hair
#Host Body Product	#Fluids	-

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #19032]	Pathogenicity (human)	yes
[Ref.: #19032]	Pathogenicity (animal)	yes
[Ref.: #19032]	Biosafety level	2	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Staphylococcus pseudintermedius strain FDAARGOS_1073	283734.2351	complete	PATRIC	283734 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Staphylococcus pseudintermedius strain FDAARGOS_1073 strain Not applicable PATRIC: 283734.2351
[Ref.: #69480]	motile	no	91.978	no
[Ref.: #69480]	gram-positive	yes	90.818	no
[Ref.: #69480]	anaerobic	no	99.065	no
[Ref.: #69480]	halophile	yes	89.593	no
[Ref.: #69480]	spore-forming	no	84.155	no
[Ref.: #69480]	glucose-util	yes	87.525	no
[Ref.: #69480]	flagellated	no	90.616	no
[Ref.: #69480]	aerobic	yes	91.481	no
[Ref.: #69480]	thermophile	no	99.845	yes
[Ref.: #69480]	glucose-ferment	yes	85.284	no

Availability in culture collections External links

[Ref.: #19032]

Culture collection no.

DSM 25714

[Ref.: #87516]

SI-ID 404829

References

#19032

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 25714

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68375

Automatically annotated from API ID32STA .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#87516

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID404829.1 )

* These data were automatically processed and therefore are not curated

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Staphylococcus pseudintermedius strain FDAARGOS_1073 strain Not applicable

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Change proposal