Novosphingobium aquaticum (DSM 25088, CCM 7983, FNE08-86)

Name: Novosphingobium aquaticum (DSM 25088, CCM 7983, FNE08-86)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 23268

Type strain

Strain Designation FNE08-86

Culture col. no. DSM 25088 CCM 7983 FNE08-86

NCBI tax ID(s) 1117703

Special Collections DSMZ Literature strains

History DSMZ <- S. P. Glaeser, Justus-Liebig-Universität, Giessen, Germany; FNE08-86

Links

Novosphingobium aquaticum FNE08-86 is a spore-forming, Gram-negative, rod-shaped bacterium that was isolated from subsurface water of a humic matter-rich and almost-neutral bog lake.

spore-forming Gram-negative rod-shaped 16S sequence Bacteria

Name and taxonomic classification

SI-ID 408214

DSM 25088

@ref 20215

Last LPSN update 2026-05-29 08:30:25

Domain Bacteria

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Sphingomonadales

Family Erythrobacteraceae

Genus Novosphingobium

Species Novosphingobium aquaticum

Full scientific name Novosphingobium aquaticum Glaeser et al. 2013

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Motility
30951	negative	2 µm	0.9 µm	rod-shaped

Pigmentation

30951

Productionyes

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
19372	K7 MEDIUM (DSMZ Medium 1199)		Medium recipe at MediaDive	Name: K7 MEDIUM (DSMZ Medium 1199) Composition: Peptone 1.0 g/l Yeast extract 1.0 g/l Glucose 1.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
19372	positive	growth	28
30951	positive	growth	04-32

Culture pH

@ref	Ability	Type	PH	PH range
30951	positive	optimum	5.25
30951	positive	growth	4.0-8.0	acidophile

Physiology and metabolism

Spore formation

30951

Spore formationyes

Halophily

@ref	Salt	Growth	Tested relation	Concentration
30951	NaCl	positive	growth	0-0.75 %
30951	NaCl	positive	optimum	0.25 %

Observation

30951

Observationaggregates in clumps

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
30951	22599 ChEBI	arabinose	+	carbon source
30951	17057 ChEBI	cellobiose	+	carbon source
30951	4853 ChEBI	esculin	+	hydrolysis
30951	28757 ChEBI	fructose	+	carbon source
30951	28260 ChEBI	galactose	+	carbon source
30951	17234 ChEBI	glucose	+	carbon source
30951	17306 ChEBI	maltose	+	carbon source
30951	37684 ChEBI	mannose	+	carbon source
30951	26271 ChEBI	proline	+	carbon source
30951	17992 ChEBI	sucrose	+	carbon source

Enzymes

@ref	Value	Activity	Ec
30951	catalase	+	1.11.1.6
30951	cytochrome oxidase	+	1.9.3.1

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Lake (large)
#Environmental	#Terrestrial	#Wetland (Swamp)

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude
19372	subsurface water of a humic matter-rich and almost-neutral bog lake	Brandenburg, Lake Große Fuchskuhle, north-east basin (53° 10' N 13° 02' E)	Germany	DEU	Europe	53.1667	13.0333 53.1667/13.0333

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
19372	1	Risk group (German classification) According to TRBA 466

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
19372	Novosphingobium aquaticum (ex Glaeser et al. 2013) strain FNE08-86 16S ribosomal RNA gene, partial sequence	JN399173	1354		1117703

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Novosphingobium aquaticum sp. nov., isolated from the humic-matter-rich bog lake Grosse Fuchskuhle.	Glaeser SP, Bolte K, Busse HJ, Kampfer P, Grossart HP, Glaeser J	Int J Syst Evol Microbiol	10.1099/ijs.0.048280-0	2012

References

#19372	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 25088
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#27281	IJSEM 2630 2013 ( DOI 10.1099/ijs.0.048280-0 , PubMed 23264506 )
#30951	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27281
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Novosphingobium aquaticum (DSM 25088, CCM 7983, FNE08-86)

Name and taxonomic classification

Morphology

Cell morphology

Pigmentation

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Spore formation

Halophily

Observation

Metabolite utilization

Enzymes

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

16S sequences

Genome-based predictions

Literature

Literature

References

BacDive

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