Name: Saccharomonospora oceani DSM 45700
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 23220

Type strain:

Species: Saccharomonospora oceani

Culture col. no.: DSM 45700, JCM 18128, YIM M11168

Strain history: S.-K. Tang YIM M11168.

NCBI tax ID(s): 1155536 (species)

Section

Saccharomonospora oceani DSM 45700 is a mesophilic bacterium that was isolated from marine sediment.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Pseudonocardiales*
	Family	*Pseudonocardiaceae*
	Genus	*Saccharomonospora*
	Species	**Saccharomonospora oceani**
	Full Scientific Name (LPSN)	Saccharomonospora oceani Zhang et al. 2014

Information on morphological and physiological properties Morphology

Multimedia content

[Ref.: #18913]

Caption:

Medium 553 28°C

[Ref.: #18913]

Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	28 °C

[Ref.: #67770]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: MK-9(H₄)

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #18913]	Sample type/isolated from	marine sediment
[Ref.: #18913]	Geographic location (country and/or sea, region)	Little Andaman (92° 32.417'E, 10°35.550'N)
[Ref.: #18913]	Country	India
[Ref.: #18913]	Country ISO 3 Code	IND
[Ref.: #18913]	Continent	Asia
[Ref.: #18913]	Geographic location	10.5925°/92.5403°

[Ref.: #67770]	Sample type/isolated from	Marine sample in Little Andaman
[Ref.: #67770]	Country	India
[Ref.: #67770]	Country ISO 3 Code	IND
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Marine
#Environmental	#Aquatic	#Sediment

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KC768771 (>99% sequence identity) for Saccharomonospora oceani subclade from Microbeatlas

Aquatic Samples	213
Soil Samples	824
Animal Samples	539
Plant Samples	179
Total Samples	1755

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #18913]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #18913]	Saccharomonospora oceani strain YIM M11168 16S ribosomal RNA gene, partial sequence	KC768771	1492	ENA	1155536 tax ID

[Ref.: #18913]

GC-content

71.4 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #18913]

Culture collection no.

DSM 45700, JCM 18128, YIM M11168

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Saccharomonospora oceani sp. nov. isolated from marine sediments in Little Andaman, India.	Zhang DF, Chen W, He J, Zhang XM, Xiong ZJ, Sahu MK, Sivakumar K, Li WJ	Antonie Van Leeuwenhoek	10.1007/s10482-013-9918-0	2013	*

References

#18913

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 45700

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Saccharomonospora oceani in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF