Name: Brevundimonas terrae KSL-145
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 2313

Type strain:

Species: Brevundimonas terrae

Strain Designation: KSL-145

Culture col. no.: DSM 17329, JCM 13476, KCTC 12481, CIP 109492

Strain history: CIP <- 2007, JCM <- 2005, J.H. Yoon, KRIBB, Taejon, Korea: strain KSL-145

NCBI tax ID(s): 363631 (species)

SI-ID 297148

JCM 13476, KCTC 12481, DSM 17329, CIP 109492

Other strains from Brevundimonas terrae

B. terrae CCUG 60451

Section

Brevundimonas terrae KSL-145 is an aerobe, mesophilic, Gram-negative bacterium that was isolated from soil.

Gram-negative
aerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Caulobacterales*
	Family	*Caulobacteraceae*
	Genus	*Brevundimonas*
	Species	**Brevundimonas terrae**
	Full Scientific Name (LPSN)	Brevundimonas terrae Yoon et al. 2006

Information on morphological and physiological properties Morphology

[Ref.: #67771]	Gram stain	negative
[Ref.: #123450]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %99.994

[Ref.: #123450]	Cell shape	rod-shaped

[Ref.: #123450]	Motility	no

Information on culture and growth conditions Culture and growth conditions

[Ref.: #6897]

Culture medium

TRYPTONE SOYA BROTH (TSB) (DSMZ Medium 545)

[Ref.: #6897]

Culture medium growth

[Ref.: #6897]

Culture medium link

Medium recipe at MediaDive

[Ref.: #6897]

Culture medium composition

expand / minimize

[Ref.: #33302]

Culture medium

MEDIUM 72- for trypto casein soja agar

[Ref.: #33302]

Culture medium growth

[Ref.: #33302]

Culture medium composition

expand / minimize

[Ref.: #123450]

Culture medium

CIP Medium 72

[Ref.: #123450]

Culture medium growth

[Ref.: #123450]

Culture medium link

Medium recipe provided by DSMZ

		Temperature
[Ref.: #6897]	growth	30 °C
[Ref.: #33302]	growth	30 °C
[Ref.: #67770]	growth	30 °C
[Ref.: #67771]	growth	30 °C

[Ref.: #6897]	Temperature range	mesophilic
[Ref.: #33302]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic
[Ref.: #67771]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67771]	Oxygen tolerance	aerobe
[Ref.: #123450]	Oxygen tolerance	obligate aerobe

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.998

[Ref.: #67770]

Observation

quinones: Q-10

	Metabolite utilization	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #123450]		nitrate ChEBI	-	reduction
[Ref.: #123450]		nitrite ChEBI	-	reduction

	Metabolite production	Metabolite	Production
[Ref.: #123450]		indole ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	+	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #123450]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #123450]	oxidase	+
[Ref.: #68382]	trypsin	+	3.4.21.4	* from API zym
[Ref.: #123450]	urease	-	3.5.1.5
[Ref.: #68382]	valine arylamidase	+		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #123450]	11904	-	+	+	+	-	+	+	-	+	+	+	+	-	-	-	-	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #6897]	Sample type/isolated from	soil
[Ref.: #6897]	Geographic location (country and/or sea, region)	Kwangchun
[Ref.: #6897]	Country	Republic of Korea
[Ref.: #6897]	Country ISO 3 Code	KOR
[Ref.: #6897]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Alkaline soil
[Ref.: #67770]	Geographic location (country and/or sea, region)	Kwangchun
[Ref.: #67770]	Country	Republic of Korea
[Ref.: #67770]	Country ISO 3 Code	KOR
[Ref.: #67770]	Continent	Asia

[Ref.: #67771]	Sample type/isolated from	From soil
[Ref.: #67771]	Country	Republic of Korea
[Ref.: #67771]	Country ISO 3 Code	KOR
[Ref.: #67771]	Continent	Asia

[Ref.: #123450]	Sample type/isolated from	Environment, Soil, alkaline
[Ref.: #123450]	Geographic location (country and/or sea, region)	Kwangchun
[Ref.: #123450]	Country	Republic of Korea
[Ref.: #123450]	Country ISO 3 Code	KOR
[Ref.: #123450]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #6897]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #123450]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Brevundimonas terrae strain KSL-145 16S ribosomal RNA gene, partial sequence	DQ335215	1418	ENA	363631 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Brevundimonas terrae DSM 17329	GCA_011761985	contig	GenBank	363631 tax ID
[Ref.: #66792]	Brevundimonas terrae strain DSM 17329	363631.3	wgs	PATRIC	363631 tax ID	*
[Ref.: #66792]	Brevundimonas terrae DSM 17329	2828323496	draft	JGI IMG/M	363631 tax ID	*

[Ref.: #67770]

GC-content

61.8 mol%

high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Brevundimonas terrae strain DSM 17329 PATRIC: 363631.3
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Brevundimonas terrae strain DSM 17329 PATRIC: 363631.3
[Ref.: #69480]	gram-positive	no	98.677	yes
[Ref.: #69480]	anaerobic	no	95.851	yes
[Ref.: #69480]	halophile	no	93.438	no
[Ref.: #69480]	spore-forming	no	95.68	no
[Ref.: #69480]	glucose-util	yes	51.695	no
[Ref.: #69480]	aerobic	yes	89.719	yes
[Ref.: #69480]	motile	yes	91.35	no
[Ref.: #69480]	flagellated	no	73.562	no
[Ref.: #69480]	thermophile	no	99.275	no
[Ref.: #69480]	glucose-ferment	no	91.679	no

Availability in culture collections External links

[Ref.: #6897]

Culture collection no.

DSM 17329, JCM 13476, KCTC 12481, CIP 109492

[Ref.: #71870]

SI-ID 297148

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Brevundimonas vancanneytii sp. nov., isolated from blood of a patient with endocarditis.	Estrela AB, Abraham WR	Int J Syst Evol Microbiol	10.1099/ijs.0.015651-0	2009	*
Phylogeny	Brevundimonas naejangsanensis sp. nov., a proteolytic bacterium isolated from soil, and reclassification of Mycoplana bullata into the genus Brevundimonas as Brevundimonas bullata comb. nov.	Kang SJ, Choi NS, Choi JH, Lee JS, Yoon JH, Song JJ	Int J Syst Evol Microbiol	10.1099/ijs.0.011700-0	2009	*
Phylogeny	Brevundimonas terrae sp. nov., isolated from an alkaline soil in Korea.	Yoon JH, Kang SJ, Lee JS, Oh TK	Int J Syst Evol Microbiol	10.1099/ijs.0.64253-0	2006	*

References

#6897

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 17329

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#33302 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#68382

Automatically annotated from API zym .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#71870

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID297148.1 )

#123450 Collection of Institut Pasteur ; Curators of the CIP; CIP 109492
* These data were automatically processed and therefore are not curated

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Brevundimonas terrae strain DSM 17329

Brevundimonas terrae strain DSM 17329

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