Brevundimonas aurantiaca (DSM 4731, ATCC 15266, CCUG 45020)

Name: Brevundimonas aurantiaca (DSM 4731, ATCC 15266, CCUG 45020)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 2309

Type strain

Strain Designation CB-R

Culture col. no. DSM 4731 ATCC 15266 CCUG 45020 LMG 18359 CB-R

NCBI tax ID(s) 74316

Special Collections DSMZ CCUG

History <- ATCC <- J.S. Poindexter, CB-R <- G. Zavarcin

Links

Brevundimonas aurantiaca CB-R is an aerobe bacterium that was isolated from contaminated Chlorella culture.

aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 11940

LMG 18359,ATCC 15266,DSM 4731,CCUG 45020

@ref 20215

Last LPSN update 2026-02-09 11:18:16

Domain Bacteria

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Caulobacterales

Family Caulobacteraceae

Genus Brevundimonas

Species Brevundimonas aurantiaca

Full scientific name Brevundimonas aurantiaca (ex Poindexter 1964) Abraham et al. 1999

BacDive ID	Other strains from **Brevundimonas aurantiaca** (1)	Type strain
171073	B. aurantiaca CIMB 05-0537, CRBIP17.36

Morphology

Cell morphology

@ref	Gram stain	Confidence
125438	negative	98.328
125439	negative	93.3

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
1737	CAULOBACTER MEDIUM (DSMZ Medium 595)		Medium recipe at MediaDive	Name: CAULOBACTER MEDIUM (DSMZ Medium 595) Composition: Agar 15.0 g/l Bacto peptone 2.0 g/l Yeast extract 1.0 g/l MgSO4 x 7 H2O 0.2 g/l Tap water

Culture temp

@ref	Growth	Type	Temperature (°C)
1737	positive	growth	30
56598	positive	growth	30

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
56598	aerobe
125439	aerobe	93.7

Spore formation

@ref	Spore formation	Confidence
125438		91.848
125439		92.3

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68369	17128 ChEBI	adipate	-	assimilation	from API 20NE
68369	29016 ChEBI	arginine	-	hydrolysis	from API 20NE
68369	17634 ChEBI	D-glucose	+	assimilation	from API 20NE
68369	17634 ChEBI	D-glucose	-	fermentation	from API 20NE
68369	16899 ChEBI	D-mannitol	-	assimilation	from API 20NE
68369	16024 ChEBI	D-mannose	-	assimilation	from API 20NE
68369	27689 ChEBI	decanoate	+	assimilation	from API 20NE
68369	4853 ChEBI	esculin	+	hydrolysis	from API 20NE
68369	5291 ChEBI	gelatin	+	hydrolysis	from API 20NE
68369	24265 ChEBI	gluconate	-	assimilation	from API 20NE
68369	30849 ChEBI	L-arabinose	-	assimilation	from API 20NE
68369	25115 ChEBI	malate	+	assimilation	from API 20NE
68369	17306 ChEBI	maltose	+	assimilation	from API 20NE
68369	59640 ChEBI	N-acetylglucosamine	-	assimilation	from API 20NE
68369	17632 ChEBI	nitrate	-	reduction	from API 20NE
68369	27897 ChEBI	tryptophan	-	energy source	from API 20NE
68369	16199 ChEBI	urea	-	hydrolysis	from API 20NE

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68369	35581 ChEBI	indole		from API 20NE

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68369	35581 ChEBI	indole	-	from API 20NE

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	+	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68369	arginine dihydrolase	-	3.5.3.6	from API 20NE
68382	beta-galactosidase	-	3.2.1.23	from API zym
68382	beta-glucosidase	+	3.2.1.21	from API zym
68369	beta-glucosidase	+	3.2.1.21	from API 20NE
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68382	cystine arylamidase	-	3.4.11.3	from API zym
68369	cytochrome oxidase	+	1.9.3.1	from API 20NE
68382	esterase (C 4)	-		from API zym
68382	esterase lipase (C 8)	+		from API zym
68369	gelatinase	+		from API 20NE
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
68382	trypsin	+	3.4.21.4	from API zym
68369	urease	-	3.5.1.5	from API 20NE
68382	valine arylamidase	+		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
56598	-	+	-	+	-	+	+	-	+	+	+	+	-	-	-	+	+	-	-	-

API 20NE

@ref	Reduction of nitratesNO3	TRP	GLU_ Ferm	ADH (Arg)	URE	ESC	GEL	PNPG	GLU_ Assim	ARA	MNE	MAN	NAG	MAL	GNT	CAP	ADI	MLT	CIT	PAC	OX
56598	-	-	-	-	-	+	+	+	+	-	-	-	-	+	-	+	-	+	-	-	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Contamination	-
#Engineered	#Laboratory	#Lab enrichment
#Host	#Algae	#Green algae

Isolation

@ref	Sample type	Host species
1737	contaminated Chlorella culture	Chlorella
56598	Contaminated Chlorella culture

Taxonmaps

69479

Global distribution of 16S sequence AJ227787 (>99% sequence identity) for Brevundimonas from Microbeatlas

Aquatic Samples	640
Soil Samples	220
Animal Samples	1536
Plant Samples	185
Total Samples	2581

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
1737	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM1419995v1 assembly for Brevundimonas aurantiaca DSM 4731	contig	GCA_014199955	74316.3	2829751152	74316	74.61

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Caulobacter henricii strain:ATCC15266 gene for 16S rRNA, partial sequence	AB016846	1410	69395
20218	Brevundimonas aurantiaca DNA for 16S ribosomal RNA, strain CB-R	AJ227787	1416	74316
124043	Brevundimonas aurantiaca strain DSM 4731 16S ribosomal RNA gene, partial sequence.	PQ524593	599	74316

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Brevundimonas aurantiaca DSM 4731
NCBI: GCA_014199955

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	92.30	no
125439	motility	BacteriaNetⓘ	yes	58.30	no
125439	gram_stain	BacteriaNetⓘ	negative	93.30	no
125439	oxygen_tolerance	BacteriaNetⓘ	aerobe	93.70	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Brevundimonas aurantiaca strain DSM 4731
PATRIC: 74316.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	98.33	no
125438	anaerobic	anaerobicⓘ	no	95.07	no
125438	spore-forming	spore-formingⓘ	no	91.85	no
125438	aerobic	aerobicⓘ	yes	82.69	yes
125438	thermophilic	thermophileⓘ	no	96.35	no
125438	flagellated	motile2+ⓘ	yes	61.11	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Production of the Marine Carotenoid Astaxanthin by Metabolically Engineered Corynebacterium glutamicum.	Henke NA, Heider SA, Peters-Wendisch P, Wendisch VF.	Mar Drugs	10.3390/md14070124	2016
Phylogeny	Evaluation of matrix-assisted laser desorption ionization-time-of-flight mass spectrometry in comparison to 16S rRNA gene sequencing for species identification of nonfermenting bacteria.	Mellmann A, Cloud J, Maier T, Keckevoet U, Ramminger I, Iwen P, Dunn J, Hall G, Wilson D, Lasala P, Kostrzewa M, Harmsen D.	J Clin Microbiol	10.1128/jcm.00157-08	2008
Genetics	Optimization of the IPP Precursor Supply for the Production of Lycopene, Decaprenoxanthin and Astaxanthin by Corynebacterium glutamicum.	Heider SA, Wolf N, Hofemeier A, Peters-Wendisch P, Wendisch VF.	Front Bioeng Biotechnol	10.3389/fbioe.2014.00028	2014
Metabolism	Carotenoid beta-ring hydroxylase and ketolase from marine bacteria-promiscuous enzymes for synthesizing functional xanthophylls.	Misawa N.	Mar Drugs	10.3390/md9050757	2011
Phylogeny	Classification of a Brevundimonas strain detectable after PCR with a Helicobacter-specific primer pair.	Buczolits S, Rosengarten R, Hirt R, Busse HJ	Syst Appl Microbiol	10.1078/0723-2020-00052	2001
Phylogeny	Brevundimonas balnearis sp. nov., isolated from the well water of a thermal bath.	Toth E, Szuroczki S, Keki Z, Kosztik J, Makk J, Boka K, Sproer C, Marialigeti K, Schumann P	Int J Syst Evol Microbiol	10.1099/ijsem.0.001746	2017
Phylogeny	Brevundimonas albigilva sp. nov., isolated from forest soil.	Pham VHT, Jeong S, Chung S, Kim J	Int J Syst Evol Microbiol	10.1099/ijsem.0.000848	2015

References

#1737	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 4731
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#56598	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 45020
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#68369	Automatically annotated from API 20NE .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Brevundimonas aurantiaca (DSM 4731, ATCC 15266, CCUG 45020)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

API zym

API 20NE

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_014199955

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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