Chryseobacterium koreense (DSM 25209, CCUG 49689, Chj707)

Name: Chryseobacterium koreense (DSM 25209, CCUG 49689, Chj707)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 23022

Type strain

Strain Designation Chj707

Culture col. no. DSM 25209 CCUG 49689 Chj707 IAM 15050 JCM 21512 3 more

NCBI tax ID(s) 1304281 232216

Special Collections DSMZ CCUG JCM KCTC CIP Literature strains

History DSMZ <- CCUG <- P. Kämpfer, Univ. Giessen, Germany <- S. T. Lee, KAIST JCM <-- IAM 15050 <-- S.-T. Lee Chj707. KCTC <- ST Lee, KAIST CIP <- 2005, IAM <- S.T. Lee, Kaist, Korea: strain Chj707

Links

Chryseobacterium koreense Chj707 is an aerobe, Gram-negative, rod-shaped bacterium that was isolated from fresh mineral water.

Gram-negative rod-shaped aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 107101

KCTC 12107,IAM 15050,CCUG 49689,JCM 21512,NBRC 103027,CIP 108606,DSM 25209

@ref 20215

Last LPSN update 2026-05-29 08:30:21

Domain Bacteria

Phylum Bacteroidota

Class Flavobacteriia

Order Flavobacteriales

Family Weeksellaceae

Genus Chryseobacterium

Species Chryseobacterium koreense

Full scientific name Chryseobacterium koreense (Kim et al. 2004) Kämpfer et al. 2009

Synonyms (1)

Kaistella koreensis

BacDive ID	Other strains from **Chryseobacterium koreense** (3)	Type strain
163212	C. koreense JCM 21513, IAM 15051, KCTC 12108
163213	C. koreense JCM 21514, IAM 15052, KCTC 12109
173139	C. koreense 565-75, CIP 111035

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
30148	negative	rod-shaped
67771		rod-shaped
67771	negative
125439	negative		92.918
125438	negative		98.44
120466	negative	rod-shaped

Colony morphology

120466

Hemolysis ability1

Pigmentation

@ref	Production	Name
30148
120466		flexirubin type pigments

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
19094	PLATE COUNT AGAR (DSMZ Medium 464)	Medium recipe at MediaDive	Name: PLATE COUNT AGAR (DSMZ Medium 464) Composition: Agar 15.0 g/l Tryptone 5.0 g/l Yeast extract 2.5 g/l Dextrose 1.0 g/l Distilled water
34328	MEDIUM 72- for trypto casein soja agar		Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
120466	CIP Medium 72	Medium recipe at CIP
120466	CIP Medium 328	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
19094	positive	growth	28
30148	positive	optimum	30
34328	positive	growth	30
58656	positive	growth	22-37
67770	positive	growth	30
67771	positive	growth	30
120466	positive	growth	25-37
120466	negative	growth	5
120466	negative	growth	15
120466	negative	growth	41
120466	negative	growth	45

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
30148	aerobe
58656	obligate aerobe
67771	aerobe
120466	obligate aerobe
125439	obligate aerobe	93.038

Spore formation

@ref	Spore formation	Confidence
30148
67771
125438		90.277
125439		99.162

Halophily

@ref	Salt	Growth	Tested relation	Concentration
120466	NaCl	positive	growth	0-2 %
120466	NaCl		growth	4 %
120466	NaCl		growth	6 %
120466	NaCl		growth	8 %
120466	NaCl		growth	10 %

Observation

@ref	Observation
67770	quinones: MK-6
67771	quinones: MK-6

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
120466	16947 ChEBI	citrate	-	carbon source
120466	4853 ChEBI	esculin	+	hydrolysis
120466	606565 ChEBI	hippurate	+	hydrolysis
120466	15792 ChEBI	malonate	-	assimilation
30148	17632 ChEBI	nitrate	+	reduction
120466	17632 ChEBI	nitrate	-	builds gas from
120466	17632 ChEBI	nitrate	+	reduction
120466	17632 ChEBI	nitrate	-	respiration
120466	16301 ChEBI	nitrite	+	builds gas from
120466	16301 ChEBI	nitrite	-	reduction

Antibiotic resistance

@ref	Metabolite	Is sensitive	Is resistant
120466	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite	Production
30148	35581 ChEBI	indole
120466	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Methylred-test	Indole test
120466	15688 ChEBI	acetoin	-
120466	17234 ChEBI	glucose		-
30148	35581 ChEBI	indole			+

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
120466	alcohol dehydrogenase	+	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	+	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
120466	amylase	+
68382	beta-galactosidase	-	3.2.1.23	from API zym
120466	beta-galactosidase	-	3.2.1.23
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
120466	caseinase	+	3.4.21.50
30148	catalase	+	1.11.1.6
120466	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
30148	cytochrome oxidase	+	1.9.3.1
120466	DNase	+
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
120466	gamma-glutamyltransferase	+	2.3.2.2
120466	gelatinase	+
120466	lecithinase	+
68382	leucine arylamidase	+	3.4.11.1	from API zym
120466	lipase	-
68382	lipase (C 14)	-		from API zym
120466	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
120466	ornithine decarboxylase	-	4.1.1.17
120466	oxidase	+
120466	phenylalanine ammonia-lyase	-	4.3.1.24
120466	protease	+
68382	trypsin	-	3.4.21.4	from API zym
120466	tryptophan deaminase	+
120466	tween esterase	+
120466	urease	-	3.5.1.5
68382	valine arylamidase	+		from API zym

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	adipate degradation	100	2 of 2
66794	phenylacetate degradation (aerobic)	100	5 of 5
66794	C4 and CAM-carbon fixation	100	8 of 8
66794	gluconeogenesis	100	8 of 8
66794	vitamin K metabolism	100	5 of 5
66794	formaldehyde oxidation	100	3 of 3
66794	coenzyme A metabolism	100	4 of 4
66794	glycogen metabolism	100	5 of 5
66794	sulfopterin metabolism	100	4 of 4
66794	denitrification	100	2 of 2
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	folate polyglutamylation	100	1 of 1
66794	ppGpp biosynthesis	100	4 of 4
66794	palmitate biosynthesis	95.45	21 of 22
66794	starch degradation	90	9 of 10
66794	chorismate metabolism	88.89	8 of 9
66794	lipid A biosynthesis	88.89	8 of 9
66794	NAD metabolism	83.33	15 of 18
66794	peptidoglycan biosynthesis	80	12 of 15
66794	lipoate biosynthesis	80	4 of 5
66794	cellulose degradation	80	4 of 5
66794	glycine betaine biosynthesis	80	4 of 5
66794	tetrahydrofolate metabolism	78.57	11 of 14
66794	aspartate and asparagine metabolism	77.78	7 of 9
66794	CO2 fixation in Crenarchaeota	77.78	7 of 9
66794	glycogen biosynthesis	75	3 of 4
66794	CMP-KDO biosynthesis	75	3 of 4
66794	acetate fermentation	75	3 of 4
66794	propanol degradation	71.43	5 of 7
66794	cardiolipin biosynthesis	71.43	5 of 7
66794	photosynthesis	71.43	10 of 14
66794	ubiquinone biosynthesis	71.43	5 of 7
66794	Entner Doudoroff pathway	70	7 of 10
66794	propionate fermentation	70	7 of 10
66794	glutamate and glutamine metabolism	67.86	19 of 28
66794	L-lactaldehyde degradation	66.67	2 of 3
66794	serine metabolism	66.67	6 of 9
66794	acetoin degradation	66.67	2 of 3
66794	d-mannose degradation	66.67	6 of 9
66794	flavin biosynthesis	66.67	10 of 15
66794	methionine metabolism	65.38	17 of 26
66794	purine metabolism	64.89	61 of 94
66794	citric acid cycle	64.29	9 of 14
66794	tyrosine metabolism	64.29	9 of 14
66794	glutathione metabolism	64.29	9 of 14
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	62.5	5 of 8
66794	alanine metabolism	62.07	18 of 29
66794	cysteine metabolism	61.11	11 of 18
66794	glycolysis	58.82	10 of 17
66794	lipid metabolism	58.06	18 of 31
66794	non-pathway related	57.89	22 of 38
66794	pyrimidine metabolism	57.78	26 of 45
66794	pentose phosphate pathway	54.55	6 of 11
66794	leucine metabolism	53.85	7 of 13
66794	CDP-diacylglycerol biosynthesis	50	1 of 2
66794	heme metabolism	50	7 of 14
66794	dTDPLrhamnose biosynthesis	50	4 of 8
66794	ethanol fermentation	50	1 of 2
66794	suberin monomers biosynthesis	50	1 of 2
66794	dolichol and dolichyl phosphate biosynthesis	50	1 of 2
66794	ketogluconate metabolism	50	4 of 8
66794	isoleucine metabolism	50	4 of 8
66794	butanoate fermentation	50	2 of 4
66794	quinate degradation	50	1 of 2
66794	threonine metabolism	50	5 of 10
66794	kanosamine biosynthesis II	50	1 of 2
66794	cis-vaccenate biosynthesis	50	1 of 2
66794	tryptophan metabolism	47.37	18 of 38
66794	phenylpropanoid biosynthesis	46.15	6 of 13
66794	phenylalanine metabolism	46.15	6 of 13
66794	vitamin B6 metabolism	45.45	5 of 11
66794	lysine metabolism	45.24	19 of 42
66794	mevalonate metabolism	42.86	3 of 7
66794	isoprenoid biosynthesis	42.31	11 of 26
66794	carotenoid biosynthesis	40.91	9 of 22
66794	oxidative phosphorylation	40.66	37 of 91
66794	degradation of sugar acids	40	10 of 25
66794	glycine metabolism	40	4 of 10
66794	coenzyme M biosynthesis	40	4 of 10
66794	arachidonate biosynthesis	40	2 of 5
66794	vitamin B1 metabolism	38.46	5 of 13
66794	proline metabolism	36.36	4 of 11
66794	glycolate and glyoxylate degradation	33.33	2 of 6
66794	acetyl CoA biosynthesis	33.33	1 of 3
66794	cyanate degradation	33.33	1 of 3
66794	pantothenate biosynthesis	33.33	2 of 6
66794	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
66794	degradation of aromatic, nitrogen containing compounds	33.33	4 of 12
66794	valine metabolism	33.33	3 of 9
66794	octane oxidation	33.33	1 of 3
66794	enterobactin biosynthesis	33.33	1 of 3
66794	IAA biosynthesis	33.33	1 of 3
66794	histidine metabolism	31.03	9 of 29
66794	myo-inositol biosynthesis	30	3 of 10
66794	arginine metabolism	29.17	7 of 24
66794	reductive acetyl coenzyme A pathway	28.57	2 of 7
66794	degradation of hexoses	27.78	5 of 18
66794	metabolism of disaccharids	27.27	3 of 11
66794	ascorbate metabolism	27.27	6 of 22
66794	biotin biosynthesis	25	1 of 4
66794	lactate fermentation	25	1 of 4
66794	cyclohexanol degradation	25	1 of 4
66794	androgen and estrogen metabolism	25	4 of 16
66794	degradation of pentoses	25	7 of 28
66794	arachidonic acid metabolism	22.22	4 of 18
66794	nitrate assimilation	22.22	2 of 9

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
120466	-	+	+	+	-	+	+	-	-	+	+	+	-	-	-	+	-	-	-	-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
120466	not determinedn.d.	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Freshwater

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
19094	fresh mineral water		Republic of Korea	KOR	Asia
58656	Fresh mineral water		Republic of Korea	KOR	Asia
67770	Natural mineral water from Daejeon City		Republic of Korea	KOR	Asia
67771	From fresh mineral water		Republic of Korea	KOR	Asia
120466	Environment, Freshwater stream	Daejeon City	Republic of Korea	KOR	Asia

Taxonmaps

69479

Global distribution of 16S sequence AB681907 (>99% sequence identity) for Chryseobacterium koreense subclade from Microbeatlas

Aquatic Samples	2278
Soil Samples	1091
Animal Samples	2512
Plant Samples	349
Total Samples	6230

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
19094	1	Risk group (German classification) According to TRBA 466
120466	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM1420178v1 assembly for Chryseobacterium koreense DSM 25209	scaffold	GCA_014201785	232216.8	2861269263	232216	68.58
66792	ASM104543v1 assembly for Chryseobacterium koreense CCUG 49689	contig	GCA_001045435	1304281.5	2648501397	1304281	64.08

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20218	Chryseobacterium koreense gene for 16S rRNA, partial sequence, strain: NBRC 103027	AB681907	1442		232216
19094	Kaistella koreensis strain Chj707 16S ribosomal RNA gene, partial sequence	AF344179	1472		232216

GC content

@ref	GC-content (mol%)	Method
30148	42.3
19094	40.1	sequence analysis
67770	42.3	high performance liquid chromatography (HPLC)
67771	41.7

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM1420178v1 assembly for Chryseobacterium koreense DSM 25209
NCBI: GCA_014201785

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	gram_stain	BacteriaNetⓘ	negative	92.92	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	93.04	no
125439	motility	BacteriaNetⓘ	no	88.36	no
125439	spore_formation	BacteriaNetⓘ	no	99.16	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Chryseobacterium koreense CCUG 49689
PATRIC: 1304281.5

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	98.44	yes
125438	anaerobic	anaerobicⓘ	no	93.65	yes
125438	spore-forming	spore-formingⓘ	no	90.28	yes
125438	aerobic	aerobicⓘ	yes	84.50	yes
125438	thermophilic	thermophileⓘ	no	97.08	yes
125438	flagellated	motile2+ⓘ	no	89.56	yes

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Rhodanobacter spathiphylli sp. nov., a gammaproteobacterium isolated from the roots of Spathiphyllum plants grown in a compost-amended potting mix.	De Clercq D, Van Trappen S, Cleenwerck I, Ceustermans A, Swings J, Coosemans J, Ryckeboer J.	Int J Syst Evol Microbiol	10.1099/ijs.0.64131-0	2006
Phylogeny	Description of Chryseobacterium anthropi sp. nov. to accommodate clinical isolates biochemically similar to Kaistella koreensis and Chryseobacterium haifense, proposal to reclassify Kaistella koreensis as Chryseobacterium koreense comb. nov. and emended description of the genus Chryseobacterium.	Kampfer P, Vaneechoutte M, Lodders N, De Baere T, Avesani V, Janssens M, Busse HJ, Wauters G	Int J Syst Evol Microbiol	10.1099/ijs.0.008250-0	2009
Phylogeny	Kaistella koreensis gen. nov., sp. nov., a novel member of the Chryseobacterium-Bergeyella-Riemerella branch.	Kim MK, Im WT, Shin YK, Lim JH, Kim SH, Lee BC, Park MY, Lee KY, Lee ST	Int J Syst Evol Microbiol	10.1099/ijs.0.02998-0	2004
Phylogeny	Chryseobacterium oryzae sp. nov. and Chryseobacterium suipulveris sp. nov., isolated from Andong sikhye and pigpen dust, respectively.	Heo J, Won M, Lee D, Kim JS, Han BH, Kim SJ, Hong SB, Kwon SW	Int J Syst Evol Microbiol	10.1099/ijsem.0.005532	2022

References

#19094	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 25209
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#26499	IJSEM 2319 2004 ( DOI 10.1099/ijs.0.02998-0 , PubMed 15545478 )
#30148	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26499
#34328	; Curators of the CIP;
#58656	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 49689
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#67771	Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#120466	Collection of Institut Pasteur ; Curators of the CIP; CIP 108606
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Chryseobacterium koreense (DSM 25209, CCUG 49689, Chj707)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Pigmentation

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Observation

Metabolite utilization

Antibiotic resistance

Metabolite production

Metabolite tests

Enzymes

Pathway annotation

API zym

API biotype100

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_014201785

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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