Cellulomonas massiliensis (DSM 25695, CSUR P160, JCM 31973)

Name: Cellulomonas massiliensis (DSM 25695, CSUR P160, JCM 31973)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 22955

Type strain

Strain Designation JC225

Culture col. no. DSM 25695 CSUR P160 JCM 31973 JC225

NCBI tax ID(s) 1465811

Special Collections DSMZ JCM Cadoret human gut

Links

Cellulomonas massiliensis JC225 is a mesophilic prokaryote that was isolated from human feces from a healthy 16-year-old male Senegalese volunteer patient.

mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 399958

JCM 31973,DSM 25695

@ref 20215

Last LPSN update 2025-12-16 09:52:32

Domain Bacillati

Phylum Actinomycetota

Class Actinomycetes

Order Micrococcales

Family Cellulomonadaceae

Genus Cellulomonas

Species Cellulomonas massiliensis

Full scientific name Cellulomonas massiliensis Lagier et al. 2015

Morphology

Cell morphology

@ref	Gram stain	Confidence
125439	positive	99.1

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
19270	TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)		Medium recipe at MediaDive	Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
19270	positive	growth	28	mesophilic
67770	positive	growth	28	mesophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	facultative anaerobe	99.9

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2
#Infection	#Patient
#Host	#Human
#Host Body Product	#Gastrointestinal tract

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
19270	human feces from a healthy 16-year-old male Senegalese volunteer patient	Guinean-Sudanian zone, rural village Dielmo	Senegal	SEN	Africa
67770	Fecal flora of a healthy 16-year-old male		Senegal	SEN	Africa

Taxonmaps

69479

Global distribution of 16S sequence JN657218 (>99% sequence identity) for Cellulomonas from Microbeatlas

Aquatic Samples	7
Soil Samples	17
Animal Samples	20
Plant Samples	7
Total Samples	51

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
19270	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM31200v1 assembly for Cellulomonas massiliensis JC225	scaffold	GCA_000312005	1095767.3	2547132154	1095767	27.39

Genome browser: GCA_000312005

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
19270	Cellulomonas massiliensis JC225 16S ribosomal RNA gene, partial sequence	JN657218	1470		1095767

GC content

@ref	GC-content (mol%)	Method
19270	71.22	sequence analysis
67770	74.8	genome sequence analysis
67770	71.22	genome sequence analysis

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Cellulomonas massiliensis JC225
NCBI: GCA_000312005

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	yes	72.20	no
125439	motility	BacteriaNetⓘ	no	65.90	no
125439	gram_stain	BacteriaNetⓘ	positive	99.10	no
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	99.90	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Genetics	Non contiguous-finished genome sequence and description of Cellulomonas massiliensis sp. nov.	Lagier JC, Ramasamy D, Rivet R, Raoult D, Fournier PE	Stand Genomic Sci	10.4056/sigs.3316719	2012

References

#19270	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 25695
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Cellulomonas massiliensis (DSM 25695, CSUR P160, JCM 31973)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_000312005

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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