Robertmurraya kyonggiensis (DSM 26768, JCM 17569, KEMB 5401-267)

Name: Robertmurraya kyonggiensis (DSM 26768, JCM 17569, KEMB 5401-267)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 22923

Type strain

Strain Designation NB22

Culture col. no. DSM 26768 JCM 17569 KEMB 5401-267 NB22

NCBI tax ID(s) 1037680

Special Collections DSMZ JCM

History DSMZ <- JCM; JCM 17569 <- S.-S. Lee; NB22 JCM <-- S.-S. Lee NB22.

Links

Robertmurraya kyonggiensis NB22 is a bacterium that was isolated from soil of a lettuce field.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 402320

JCM 17569,DSM 26768

@ref 20215

Last LPSN update 2026-05-29 08:30:20

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Cytobacillaceae

Genus Robertmurraya

Species Robertmurraya kyonggiensis

Full scientific name Robertmurraya kyonggiensis Gupta et al. 2020

Synonyms (1)

"Bacillus kyonggiensis"

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
19238	CASO AGAR (MERCK 105458) (DSMZ Medium 220)		Medium recipe at MediaDive	Name: CASO AGAR (Merck 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
67770	positive	growth	30

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	97.544

Spore formation

@ref	Spore formation	Confidence
125438		92.468
125439		94.266

Observation

67770

Observationquinones: MK-7

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Agriculture	#Field
#Environmental	#Terrestrial	#Soil
#Host	#Plants	#Herbaceous plants (Grass,Crops)

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
19238	soil of a lettuce field	Kyonggi Province	Republic of Korea	KOR	Asia
67770	Soil of a lettuce field in Kyonggi Province		Republic of Korea	KOR	Asia

Taxonmaps

69479

Global distribution of 16S sequence JF896450 (>99% sequence identity) for Bacillus from Microbeatlas

Aquatic Samples	12
Soil Samples	58
Animal Samples	57
Plant Samples	12
Total Samples	139

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM511646v1 assembly for Robertmurraya kyonggiensis NB22	contig	GCA_005116465	1037680.4	2956921898	1037680	59.87

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
19238	Bacillus kyonggiensis strain NB22 16S ribosomal RNA gene, partial sequence	JF896450	1463		1037680

GC content

@ref	GC-content (mol%)	Method
19238	36.3
67770	36.3	high performance liquid chromatography (HPLC)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM511646v1 assembly for Robertmurraya kyonggiensis NB22
BV-BRC: 1037680.4

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	97.54	no
125439	motility	BacteriaNetⓘ	yes	87.42	no
125439	gram_stain	BacteriaNetⓘ	variable	66.34	no
125439	spore_formation	BacteriaNetⓘ	yes	94.27	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Bacillus kyonggiensis strain NB22
PATRIC: 1037680.4

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	71.24	no
125438	anaerobic	anaerobicⓘ	no	94.40	no
125438	spore-forming	spore-formingⓘ	yes	92.47	no
125438	aerobic	aerobicⓘ	yes	68.65	no
125438	thermophilic	thermophileⓘ	no	94.41	yes
125438	flagellated	motile2+ⓘ	yes	80.98	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Robust demarcation of 17 distinct Bacillus species clades, proposed as novel Bacillaceae genera, by phylogenomics and comparative genomic analyses: description of Robertmurraya kyonggiensis sp. nov. and proposal for an emended genus Bacillus limiting it only to the members of the Subtilis and Cereus clades of species.	Gupta RS, Patel S, Saini N, Chen S	Int J Syst Evol Microbiol	10.1099/ijsem.0.004475	2020
Phylogeny	Bacillus kyonggiensis sp. nov., isolated from soil of a lettuce field.	Dong K, Lee S	J Microbiol	10.1007/s12275-011-1218-7	2011

References

#19238	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 26768
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Robertmurraya kyonggiensis (DSM 26768, JCM 17569, KEMB 5401-267)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Observation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_005116465

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

Help

Social Media