[Ref.: #8745] |
Sample type/isolated from |
air |
|
[Ref.: #44731] |
Sample type/isolated from |
Air |
|
[Ref.: #67770] |
Sample type/isolated from |
Air |
|
[Ref.: #123858] |
Sample type/isolated from |
Environment, Contaminating air |
* marker position based on {}
|
|
Isolation sources categories |
|
|
-
Information on genomic background e.g. entries in nucleic sequence databass Sequence information
|
16S Sequence information: |
|
|
Sequence accession description |
Seq. accession number |
Sequence length (bp) |
Sequence database |
Associated NCBI tax ID |
|
[Ref.: #67770] |
Aerococcus viridans gene for 16S ribosomal RNA, partial sequence, strain: JCM 20461 |
LC258156 |
1488 |
|
1377 tax ID |
[Ref.: #8745] |
Aerococcus viridans strain ATCC 11563 16S ribosomal RNA gene, complete sequence |
M58797 |
1552 |
|
655812 tax ID |
[Ref.: #124043] |
Aerococcus viridans ATCC 11563 = CCUG 4311 16S ribosomal RNA gene, partial sequence. |
MN527031 |
498 |
|
655812 tax ID |
* |
[Ref.: #20218] |
Aerococcus viridans strain CCUG 4311 16S-23S ribosomal RNA intergenic spacer, partial sequence |
JN977134 |
231 |
|
1377 tax ID |
* |
[Ref.: #20218] |
Aerococcus viridans gene for 16S rRNA, partial sequence, strain: NBRC 12219 |
AB680262 |
1474 |
|
1377 tax ID |
* |
|
[Ref.: #8745] |
GC-content |
38.5 mol% |
[Ref.: #8745] |
GC-content |
40.2 mol% |
high performance liquid chromatography (HPLC) |
[Ref.: #67770] |
GC-content |
39 mol% |
thermal denaturation, midpoint method (Tm) |
[Ref.: #67770] |
GC-content |
38.5 mol% |
thermal denaturation, midpoint method (Tm) |
[Ref.: #67770] |
GC-content |
42.7 mol% |
thermal denaturation, midpoint method (Tm) |
|
-
Availability in culture collections External links
[Ref.: #8745] |
Culture collection no. |
DSM 20340, ATCC 11563, CCM 1914, IAM 13649, JCM 20461, NCDO 1225, NCTC 8251, WDCM 00061, CCUG 4311, CIP 54.145, IAM 12302, IFO 12219, LMG 17931, NBRC 12219, NISL 7400, IMET 11154, NCIMB 11775, CECT 978 |
[Ref.: #69904] |
SI-ID 10487
|
* |
|
Literature: |
|
Topic |
Title |
Authors |
Journal |
DOI |
Year |
|
Genetics |
Complete Genome Sequences of Aerococcus christensenii CCUG 28831T, Aerococcus sanguinicola CCUG 43001T, Aerococcus urinae CCUG 36881T, Aerococcus urinaeequi CCUG 28094T, Aerococcus urinaehominis CCUG 42038 BT, and Aerococcus viridans CCUG 4311T. |
Carkaci D, Dargis R, Nielsen XC, Skovgaard O, Fuursted K, Christensen JJ |
Genome Announc |
10.1128/genomeA.00302-16 |
2016 |
* |
Pathogenicity |
Urosepticemia and fatal endocarditis caused by aerococcus-like organisms. |
Christensen JJ, Gutschik E, Friis-Moller A, Korner B |
Scand J Infect Dis |
10.3109/00365549109024299 |
1991 |
* |
Phylogeny |
Phenotypic characterization, cellular fatty acid composition, and DNA relatedness of aerococci and comparison to related genera. |
Bosley GS, Wallace PL, Moss CW, Steigerwalt AG, Brenner DJ, Swenson JM, Hebert GA, Facklam RR |
J Clin Microbiol |
10.1128/jcm.28.3.416-421.1990 |
1990 |
* |
|
- References
-
#8745 |
Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ;
DSM 20340
|
-
-
-
#22982 |
Masanori Tohno,Maki Kitahara,Shuichi Matsuyama,Koji Kimura,Moriya Ohkuma,Kiyoshi Tajima:
Aerococcus vaginalis sp. nov., isolated from the vaginal mucosa of a beef cow, and emended descriptions of Aerococcus suis, Aerococcus viridans, Aerococcus urinaeequi, Aerococcus urinaehominis, Aerococcus urinae, Aerococcus christensenii and Aerococcus sanguinicola.
IJSEM 64:
1229 - 1236
2014 (
DOI 10.1099/ijs.0.058081-0 , PubMed 24421273 )
|
-
#36411 |
; Curators of the CIP;
|
-
#44731 |
Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG;
CCUG 4311
|
-
-
#66794 |
Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg:
BRENDA, the ELIXIR core data resource in 2021: new developments and updates.
Nucleic Acids Res. 49:
D498 - D508
2020 (
DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
|
-
#67770 |
Japan Collection of Microorganism (JCM) ; Curators of the JCM;
|
-
#68375 |
Automatically annotated from API ID32STA .
|
-
#68378 |
Automatically annotated from API STA .
|
-
#68379 |
Automatically annotated from API Coryne .
|
-
#68381 |
Automatically annotated from API rID32STR .
|
-
#68382 |
Automatically annotated from API zym .
|
-
#69479 |
João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.:
MicrobeAtlas 1.0 beta
.
|
-
-
#69904 |
Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.:
StrainInfo: A central database for resolving microbial strain identifiers
.
(
DOI 10.60712/SI-ID10487.1 )
|
-
#123858 |
Collection of Institut Pasteur ; Curators of the CIP;
CIP 54.145
|
-
#124043 |
Dr. Isabel Schober, Dr. Julia Koblitz:
Data extracted from sequence databases, automatically matched based on designation and taxonomy .
|
- * These data were automatically processed and therefore are not curated
Change proposal
Successfully sent
|
|