Campylobacter sputorum subsp. sputorum (LMG 7795, LMG 6450, KCTC 15215)

Name: Campylobacter sputorum subsp. sputorum (LMG 7795, LMG 6450, KCTC 15215)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 2130

Type strain

Strain Designation S-17

Culture col. no. LMG 7795 LMG 6450 KCTC 15215 DSM 10535 ATCC 35980 6 more

NCBI tax ID(s) 206 32024

Special Collections DSMZ CCUG KCTC CIP

Links

Campylobacter sputorum subsp. sputorum S-17 is a microaerophile, mesophilic, rod-shaped prokaryote that was isolated from human oral cavity.

rod-shaped microaerophile mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 1563

LMG 6447,ATCC 33562,CCUG 11289,NCTC 11367,LMG 7795,ATCC 35980,CCUG 9728,LMG 6450,NCTC 11528,KCTC15215,KCTC 15210,CIP 53103,CIP 103749,DSM 5363,DSM 10535,NCTC 111528,CCM 3960,DSM 10406,CIP 53.103,KCTC 2682,NCCB 93052,LMD 93.52

@ref 20215

Last LPSN update 2025-12-16 09:47:15

Domain Pseudomonadati

Phylum Pseudomonadota

Class Epsilonproteobacteria

Order Campylobacterales

Family Campylobacteraceae

Genus Campylobacter

Species Campylobacter sputorum subsp. sputorum

Full scientific name Campylobacter sputorum subsp. sputorum (Prévot 1940) Véron and Chatelain 1973 (Approved Lists 1980)

Synonyms (1)

"Campylobacter sputorum subsp. sputorum"

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
67771		rod-shaped
67771	negative
123286	negative	rod-shaped
125439	negative		99.5
125438	negative		98.462

Colony morphology

@ref	Incubation period
45233	2 days
123286

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
3970	SEMISOLID BRUCELLA BROTH (DSMZ Medium 703)	Medium recipe at MediaDive	Name: SEMISOLID BRUCELLA BROTH (DSMZ Medium 703) Composition: Casein peptone 10.0 g/l Bacto peptone 10.0 g/l NaCl 5.0 g/l Yeast extract 2.0 g/l Agar 1.6 g/l D-Glucose 1.0 g/l Distilled water
40777	MEDIUM 24 - for Campylobacter concisus, C. sputorum and C. mucosalis		Distilled water make up to (1000.000 ml);Horse blood (100.000 ml);Brainheart infusion agar (52.000 g);Formate solution - M00175 (100.000 ml);Fumaric acid solution- M0176 (100.000 ml)
123286	CIP Medium 24	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
3970	positive	growth	37	mesophilic
40777	positive	growth	37	mesophilic
45233	positive	growth	37	mesophilic
67771	positive	growth	37	mesophilic
123286	positive	growth	25-41
123286	negative	growth	5
123286	negative	growth	10
123286	negative	growth	45

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
3970	microaerophile
45233	microaerophile
67771	anaerobe

Spore formation

@ref	Spore formation	Confidence
125439		96.7
125438		95.37

Halophily

@ref	Salt	Growth	Tested relation	Concentration
123286	NaCl	positive	growth	3.5 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68373	30089 ChEBI	acetate	-	assimilation	from API CAM
68373	16947 ChEBI	citrate	-	assimilation	from API CAM
68373	17634 ChEBI	D-glucose	-	assimilation	from API CAM
123286	606565 ChEBI	hippurate	+	hydrolysis
68373	25115 ChEBI	malate	-	assimilation	from API CAM
68373	17632 ChEBI	nitrate	-	reduction	from API CAM
123286	17632 ChEBI	nitrate	+	reduction
123286	16301 ChEBI	nitrite	+	reduction
68373	17272 ChEBI	propionate	-	assimilation	from API CAM
68373	30031 ChEBI	succinate	-	assimilation	from API CAM

Antibiotic resistance

@ref	ChEBI	Metabolite	Sensitivity conc.
68373	474053	cefazolin	224 µg	from API CAM
68373	48923	erythromycin	14 µg	from API CAM
68373	100147	nalidixic acid	84 µg	from API CAM

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68373	16136 ChEBI	hydrogen sulfide		from API CAM
123286	35581 ChEBI	indole

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
68382	alkaline phosphatase	-	3.1.3.1	from API zym
68373	alkaline phosphatase	-	3.1.3.1	from API CAM
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68382	beta-galactosidase	-	3.2.1.23	from API zym
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
123286	catalase	-	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
123286	gamma-glutamyltransferase	-	2.3.2.2
68373	gamma-glutamyltransferase	-	2.3.2.2	from API CAM
123286	gelatinase	-
68373	L-arginine arylamidase	-		from API CAM
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
123286	oxidase	+
68373	pyrrolidonyl arylamidase	-	3.4.19.3	from API CAM
68382	trypsin	-	3.4.21.4	from API zym
123286	urease	-	3.5.1.5
68382	valine arylamidase	-		from API zym

Fatty acid profile

Metadata FA analysis

@ref

45233

Fatty acid	Percentage	ECL
C18:1 ω7c /12t/9t	28.9	17.824
C16:0	26.7	16
C14:0	22.1	14
C16:1 ω7c	8.1	15.819
C14:0 3OH/C16:1 ISO I	4.3	15.485
C16:0 3OH	3	17.52
C13:1 at 12-13	1.9	12.931
C18:2 ω6,9c/C18:0 ANTE	1.6	17.724
C12:0 ALDE ?	1.3	10.915
unknown 14.503	0.6	14.503
C13:0 ISO 2OH	0.5	13.814
C18:0	0.5	18
C12:0	0.5	12

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
123286	-	-	+	+	-	+	-	-	-	-	+	+	-	-	-	+	-	-	-	-

API CAM

@ref	URE	Reduction of nitrateNIT	EsteraseEST	HIP	GGT	TTC	PYRA	L-arginine arylamidaseArgA	L-aspartic acid arylamidaseAspA	PAL	H2S productionH2S	GLU	SUT	NAL	CFZ	ACE	PROP	MLT	CIT	Erythromycin resistance (+) sensitivity (-)ERO	CAT
3970	+	-	-	+	-	+/-	-	-	+	-	+	-	-	-	-	-	-	-	-	-	+
45233	-	-	+	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Human	-
#Host Body-Site	#Oral cavity and airways	-
#Host Body-Site	#Oral cavity and airways	#Mouth

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
3970	human oral cavity	USA	USA	North America
45233	Human oral cavity	USA	USA	North America
67771	From human oral cavity	USA	USA	North America
123286	Human, Oral cavity	Brazil	BRA	Middle and South America

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
3970	2	Risk group (German classification) According to TRBA 466
123286	2	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM824500v1 assembly for Campylobacter sputorum subsp. sputorum LMG 7795	complete	GCA_008245005	32024.6	8113798987	32024	99.14
66792	ASM880203v1 assembly for Campylobacter sputorum subsp. sputorum CCUG 9728	contig	GCA_008802035	32024.7		32024	73.91

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Campylobacter sputorum strain ATCC 33562 16S ribosomal RNA gene, partial sequence	JF747610	1469	206
20218	Campylobacter sputorum subsp. sputorum strain ATCC 35980 16S ribosomal RNA gene, partial sequence	JX912526	1434	32024
20218	Campylobacter sputorum strain LMG 7795 16S ribosomal RNA (rrs) gene, partial sequence	DQ174149	1572	206
20218	C.sputorum sputorum (LMG 7795) 16S rRNA gene	X67775	1695	32024

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Campylobacter sputorum biovar sputorum strain LMG 7795
PATRIC: 32024.6

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	96.70	no
125439	motility	BacteriaNetⓘ	no	63.50	no
125439	gram_stain	BacteriaNetⓘ	negative	99.50	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	77.60	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Campylobacter sputorum biovar sputorum LMG 7795
NCBI: GCA_008245005.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	98.46	yes
125438	anaerobic	anaerobicⓘ	no	66.72	no
125438	aerobic	aerobicⓘ	no	89.62	yes
125438	spore-forming	spore-formingⓘ	no	95.37	no
125438	thermophilic	thermophileⓘ	no	86.81	no
125438	flagellated	motile2+ⓘ	yes	65.13	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Complete genome sequence of Campylobacter sp. GTC17093 isolated from human skin infection.	Yonetamari J, Hayashi M, Muto Y, Tanaka K.	Microbiol Resour Announc	10.1128/mra.01338-24	2025
	Development of species-specific DNA probes for Campylobacter jejuni, Campylobacter coli, and Campylobacter lari by polymerase chain reaction fingerprinting.	Giesendorf BA, van Belkum A, Koeken A, Stegeman H, Henkens MH, van der Plas J, Goossens H, Niesters HG, Quint WG.	J Clin Microbiol	10.1128/jcm.31.6.1541-1546.1993	1993
Enzymology	Direct polymerase chain reaction detection of Campylobacter jejuni and Campylobacter coli in raw milk and dairy products.	Wegmuller B, Luthy J, Candrian U.	Appl Environ Microbiol	10.1128/aem.59.7.2161-2165.1993	1993
	Compilation of small ribosomal subunit RNA structures.	Neefs JM, Van de Peer Y, De Rijk P, Chapelle S, De Wachter R.	Nucleic Acids Res	10.1093/nar/21.13.3025	1993
Phylogeny	Rapid identification of Campylobacter, Arcobacter, and Helicobacter isolates by PCR-restriction fragment length polymorphism analysis of the 16S rRNA gene.	Marshall SM, Melito PL, Woodward DL, Johnson WM, Rodgers FG, Mulvey MR.	J Clin Microbiol	10.1128/jcm.37.12.4158-4160.1999	1999
	Design and evaluation of useful bacterium-specific PCR primers that amplify genes coding for bacterial 16S rRNA.	Marchesi JR, Sato T, Weightman AJ, Martin TA, Fry JC, Hiom SJ, Dymock D, Wade WG.	Appl Environ Microbiol	10.1128/aem.64.2.795-799.1998	1998
Enzymology	Detection of Helicobacter pylori in stomach tissue by use of a monoclonal antibody.	Husson MO, Leclerc H.	J Clin Microbiol	10.1128/jcm.29.12.2831-2834.1991	1991
Phylogeny	A highly specific and sensitive DNA probe derived from chromosomal DNA of Helicobacter pylori is useful for typing H. pylori isolates.	Li C, Ferguson DA, Ha T, Chi DS, Thomas E.	J Clin Microbiol	10.1128/jcm.31.8.2157-2162.1993	1993
Phylogeny	Reproducibility of tolerance tests that are useful in the identification of campylobacteria.	On SL, Holmes B.	J Clin Microbiol	10.1128/jcm.29.9.1785-1788.1991	1991
	Identification and characterization of an immunogenic outer membrane protein of Campylobacter jejuni.	Burnens A, Stucki U, Nicolet J, Frey J.	J Clin Microbiol	10.1128/jcm.33.11.2826-2832.1995	1995
	Cloned DNA probes specific for the intracellular Campylobacter-like organism of porcine proliferative enteritis.	Gebhart CJ, Lin GF, McOrist SM, Lawson GH, Murtaugh MP.	J Clin Microbiol	10.1128/jcm.29.5.1011-1015.1991	1991
Enzymology	Differentiation of Helicobacter pylori strains directly from gastric biopsy specimens by PCR-based restriction fragment length polymorphism analysis without culture.	Li C, Ha T, Chi DS, Ferguson DA, Jiang C, Laffan JJ, Thomas E.	J Clin Microbiol	10.1128/jcm.35.12.3021-3025.1997	1997
	Arcobacter-specific and Arcobacter butzleri-specific 16S rRNA-based DNA probes.	Wesley IV, Schroeder-Tucker L, Baetz AL, Dewhirst FE, Paster BJ.	J Clin Microbiol	10.1128/jcm.33.7.1691-1698.1995	1995
	Oligodeoxynucleotide probes for Campylobacter fetus and Campylobacter hyointestinalis based on 16S rRNA sequences.	Wesley IV, Wesley RD, Cardella M, Dewhirst FE, Paster BJ.	J Clin Microbiol	10.1128/jcm.29.9.1812-1817.1991	1991
Phylogeny	Development of a real-time fluorescence resonance energy transfer PCR to detect arcobacter species.	Abdelbaqi K, Buissonniere A, Prouzet-Mauleon V, Gresser J, Wesley I, Megraud F, Menard A.	J Clin Microbiol	10.1128/jcm.00256-07	2007
Enzymology	Identification and classification of Campylobacter strains by using nonradioactive DNA probes.	Chevrier D, Larzul D, Megraud F, Guesdon JL.	J Clin Microbiol	10.1128/jcm.27.2.321-326.1989	1989
Phylogeny	Rapid identification and quantification of Campylobacter coli and Campylobacter jejuni by real-time PCR in pure cultures and in complex samples.	Leblanc-Maridor M, Beaudeau F, Seegers H, Denis M, Belloc C.	BMC Microbiol	10.1186/1471-2180-11-113	2011
Metabolism	Characterization of the structurally diverse N-linked glycans of Campylobacter species.	Jervis AJ, Butler JA, Lawson AJ, Langdon R, Wren BW, Linton D.	J Bacteriol	10.1128/jb.00042-12	2012
Enzymology	Molecular cloning and expression of Campylobacter pylori species-specific antigens in Escherichia coli K-12.	Clayton CL, Wren BW, Mullany P, Topping A, Tabaqchali S.	Infect Immun	10.1128/iai.57.2.623-629.1989	1989

References

#3970	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 10535
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#40777	; Curators of the CIP;
#45233	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 9728
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67771	Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
#68373	Automatically annotated from API CAM .
#68382	Automatically annotated from API zym .
#123286	Collection of Institut Pasteur ; Curators of the CIP; CIP 103749
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Campylobacter sputorum subsp. sputorum (LMG 7795, LMG 6450, KCTC 15215)

Name and taxonomic classification